RNA–Protein interactions for RNA: ENST00000544231.1

SSPN-208, Transcript of sarcospan, humanhuman

TSL 4

Gene SSPN, Length 572 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-208ENST00000544231 AK9Q5TCS8 1911 aa17.62■□□□□ 0.41
SSPN-208ENST00000544231 MYO5AQ9Y4I1 1855 aaKnown RBP17.61■□□□□ 0.41
SSPN-208ENST00000544231 MAGEB6P1A0A0J9YX57 407 aa17.61■□□□□ 0.41
SSPN-208ENST00000544231 PPP4CP60510 307 aa17.61■□□□□ 0.41
SSPN-208ENST00000544231 EAPPQ56P03 285 aaPredicted RBP17.61■□□□□ 0.41
SSPN-208ENST00000544231 ZMYM1Q5SVZ6 1142 aa17.61■□□□□ 0.41
SSPN-208ENST00000544231 RUFY2Q8WXA3 655 aa17.61■□□□□ 0.41
SSPN-208ENST00000544231 PRMT6Q96LA8 375 aaPredicted RBP17.61■□□□□ 0.41
SSPN-208ENST00000544231 HELLSQ9NRZ9 838 aa17.61■□□□□ 0.41
SSPN-208ENST00000544231 AATFQ9NY61 560 aaKnown RBP eCLIP17.61■□□□□ 0.41
SSPN-208ENST00000544231 NBPF9Q3BBW0 867 aa17.6■□□□□ 0.41
SSPN-208ENST00000544231 ADGRA1Q86SQ6 560 aa17.6■□□□□ 0.41
SSPN-208ENST00000544231 MIGA1Q8NAN2 632 aa17.6■□□□□ 0.41
SSPN-208ENST00000544231 USP40Q9NVE5 1235 aa17.6■□□□□ 0.41
SSPN-208ENST00000544231 CDC45O75419 566 aa17.59■□□□□ 0.41
SSPN-208ENST00000544231 EGFRP00533 1210 aa17.59■□□□□ 0.41
SSPN-208ENST00000544231 MFAP1P55081 439 aaKnown RBP17.59■□□□□ 0.41
SSPN-208ENST00000544231 TNFAIP1Q13829 316 aa17.59■□□□□ 0.41
SSPN-208ENST00000544231 SPDYE2Q495Y8 402 aa17.59■□□□□ 0.41
SSPN-208ENST00000544231 CDC42EP5Q6NZY7 148 aa17.59■□□□□ 0.41
SSPN-208ENST00000544231 APOBEC3FQ8IUX4 373 aaKnown RBP17.59■□□□□ 0.41
SSPN-208ENST00000544231 TDRD3Q9H7E2 651 aaKnown RBP17.59■□□□□ 0.41
SSPN-208ENST00000544231 CLEC11AQ9Y240 323 aa17.59■□□□□ 0.41
SSPN-208ENST00000544231 RAD50Q92878 1312 aa17.58■□□□□ 0.4
SSPN-208ENST00000544231 PITPNM2Q9BZ72 1349 aa17.58■□□□□ 0.4
SSPN-208ENST00000544231 MBD4O95243 580 aa17.58■□□□□ 0.4
SSPN-208ENST00000544231 TNNI2P48788 182 aa17.58■□□□□ 0.4
SSPN-208ENST00000544231 HIRAP54198 1017 aaPredicted RBP17.58■□□□□ 0.4
SSPN-208ENST00000544231 NMIQ13287 307 aaPredicted RBP17.58■□□□□ 0.4
SSPN-208ENST00000544231 MCMDC2Q4G0Z9 681 aa17.58■□□□□ 0.4
SSPN-208ENST00000544231 FKBP1CQ5VVH2 108 aa17.58■□□□□ 0.4
SSPN-208ENST00000544231 LDHDQ86WU2 507 aa17.58■□□□□ 0.4
SSPN-208ENST00000544231 TEX11Q8IYF3 940 aa17.58■□□□□ 0.4
SSPN-208ENST00000544231 OSBP2Q969R2 916 aa17.58■□□□□ 0.4
SSPN-208ENST00000544231 DCPSQ96C86 337 aaKnown RBP17.58■□□□□ 0.4
SSPN-208ENST00000544231 CRNKL1Q9BZJ0 848 aaKnown RBP17.58■□□□□ 0.4
SSPN-208ENST00000544231 VEZTQ9HBM0 779 aa17.58■□□□□ 0.4
SSPN-208ENST00000544231 GGA3Q9NZ52 723 aa17.58■□□□□ 0.4
SSPN-208ENST00000544231 ZNF70Q9UC06 446 aaPredicted RBP17.58■□□□□ 0.4
SSPN-208ENST00000544231 PCDHAC2Q9Y5I4 1007 aa17.58■□□□□ 0.4
SSPN-208ENST00000544231 CLRN2A0PK11 232 aa17.57■□□□□ 0.4
SSPN-208ENST00000544231 GNAT2P19087 354 aa17.57■□□□□ 0.4
SSPN-208ENST00000544231 CHMLP26374 656 aa17.57■□□□□ 0.4
SSPN-208ENST00000544231 ANGEL2Q5VTE6 544 aaKnown RBP17.57■□□□□ 0.4
SSPN-208ENST00000544231 CWC27Q6UX04 472 aaKnown RBP17.57■□□□□ 0.4
SSPN-208ENST00000544231 ZNF784Q8NCA9 323 aaPredicted RBP17.57■□□□□ 0.4
SSPN-208ENST00000544231 DDRGK1Q96HY6 314 aa17.57■□□□□ 0.4
SSPN-208ENST00000544231 RIOK1Q9BRS2 568 aaKnown RBP17.57■□□□□ 0.4
SSPN-208ENST00000544231 PUS7LQ9H0K6 701 aaKnown RBP17.57■□□□□ 0.4
SSPN-208ENST00000544231 GPAA1O43292 621 aa17.56■□□□□ 0.4
SSPN-208ENST00000544231 CHGBP05060 677 aa17.56■□□□□ 0.4
SSPN-208ENST00000544231 RHBDL3P58872 404 aa17.56■□□□□ 0.4
SSPN-208ENST00000544231 DYNLL1P63167 89 aaKnown RBP17.56■□□□□ 0.4
SSPN-208ENST00000544231 SLFNL1Q499Z3 407 aa17.56■□□□□ 0.4
SSPN-208ENST00000544231 SULF1Q8IWU6 871 aa17.56■□□□□ 0.4
SSPN-208ENST00000544231 SH3RF3Q8TEJ3 882 aaPredicted RBP17.56■□□□□ 0.4
SSPN-208ENST00000544231 FAM227BQ96M60 508 aa17.56■□□□□ 0.4
SSPN-208ENST00000544231 IDI2Q9BXS1 227 aa17.56■□□□□ 0.4
SSPN-208ENST00000544231 ARMT1Q9H993 441 aa17.56■□□□□ 0.4
SSPN-208ENST00000544231 ADAMTSL1Q8N6G6 1762 aa17.56■□□□□ 0.4
SSPN-208ENST00000544231 A0A0D9SFI3 127 aa17.55■□□□□ 0.4
SSPN-208ENST00000544231 M0R2C6 588 aa17.55■□□□□ 0.4
SSPN-208ENST00000544231 NPM3O75607 178 aaKnown RBP17.55■□□□□ 0.4
SSPN-208ENST00000544231 USP5P45974 858 aa17.55■□□□□ 0.4
SSPN-208ENST00000544231 LCORLQ8N3X6 602 aa17.55■□□□□ 0.4
SSPN-208ENST00000544231 STRBPQ96SI9 672 aaKnown RBP17.55■□□□□ 0.4
SSPN-208ENST00000544231 PGAP2Q9UHJ9 254 aa17.55■□□□□ 0.4
SSPN-208ENST00000544231 PPP2R3BQ9Y5P8 575 aa17.55■□□□□ 0.4
SSPN-208ENST00000544231 RPAP1Q9BWH6 1393 aaPredicted RBP17.54■□□□□ 0.4
SSPN-208ENST00000544231 ECM29Q5VYK3 1845 aa17.54■□□□□ 0.4
SSPN-208ENST00000544231 CCDC171Q6TFL3 1326 aa17.54■□□□□ 0.4
SSPN-208ENST00000544231 ENTPD3O75355 529 aa17.54■□□□□ 0.4
SSPN-208ENST00000544231 FAM83AQ86UY5 434 aa17.54■□□□□ 0.4
SSPN-208ENST00000544231 SEC62Q99442 399 aaKnown RBP17.54■□□□□ 0.4
SSPN-208ENST00000544231 SLC4A4Q9Y6R1 1079 aa17.54■□□□□ 0.4
SSPN-208ENST00000544231 TCP10L2B9ZVM9 353 aa17.53■□□□□ 0.4
SSPN-208ENST00000544231 KIF3CO14782 793 aa17.53■□□□□ 0.4
SSPN-208ENST00000544231 EIF5BO60841 1220 aaKnown RBP17.53■□□□□ 0.4
SSPN-208ENST00000544231 WDHD1O75717 1129 aaPredicted RBP17.53■□□□□ 0.4
SSPN-208ENST00000544231 CDC37L1Q7L3B6 337 aa17.53■□□□□ 0.4
SSPN-208ENST00000544231 KRT26Q7Z3Y9 468 aa17.53■□□□□ 0.4
SSPN-208ENST00000544231 NACAP1Q9BZK3 213 aa17.53■□□□□ 0.4
SSPN-208ENST00000544231 ATP8A2Q9NTI2 1148 aa17.53■□□□□ 0.4
SSPN-208ENST00000544231 ASTN2O75129 1339 aaPredicted RBP17.52■□□□□ 0.4
SSPN-208ENST00000544231 CACNB3P54284 484 aa17.52■□□□□ 0.4
SSPN-208ENST00000544231 PICALMQ13492 652 aa17.52■□□□□ 0.4
SSPN-208ENST00000544231 CHADLQ6NUI6 762 aa17.52■□□□□ 0.4
SSPN-208ENST00000544231 AMOTL1Q8IY63 956 aa17.52■□□□□ 0.4
SSPN-208ENST00000544231 TGFBRAP1Q8WUH2 860 aa17.52■□□□□ 0.4
SSPN-208ENST00000544231 FAM151AQ8WW52 585 aa17.52■□□□□ 0.4
SSPN-208ENST00000544231 FLT1P17948 1338 aa17.51■□□□□ 0.39
SSPN-208ENST00000544231 SGSM2O43147 1006 aa17.51■□□□□ 0.39
SSPN-208ENST00000544231 APPP05067 770 aa17.51■□□□□ 0.39
SSPN-208ENST00000544231 POTEIP0CG38 1075 aa17.51■□□□□ 0.39
SSPN-208ENST00000544231 POTEJP0CG39 1038 aa17.51■□□□□ 0.39
SSPN-208ENST00000544231 NFIAQ12857 509 aa17.51■□□□□ 0.39
SSPN-208ENST00000544231 RASA3Q14644 834 aa17.51■□□□□ 0.39
SSPN-208ENST00000544231 GIMAP6Q6P9H5 292 aa17.51■□□□□ 0.39
SSPN-208ENST00000544231 CCDC129Q6ZRS4 1044 aa17.51■□□□□ 0.39
SSPN-208ENST00000544231 KIAA1211Q6ZU35 1233 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms