RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 CDC27P30260 824 aa14.46□□□□□ -0.09
SMG8-202ENST00000543872 KAT2BQ92831 832 aa14.46□□□□□ -0.09
SMG8-202ENST00000543872 RAB21Q9UL25 225 aa14.46□□□□□ -0.09
SMG8-202ENST00000543872 XRN1Q8IZH2 1706 aaKnown RBP14.46□□□□□ -0.1
SMG8-202ENST00000543872 GSCP56915 257 aaPredicted RBP14.46□□□□□ -0.1
SMG8-202ENST00000543872 GBP3Q9H0R5 595 aa14.46□□□□□ -0.1
SMG8-202ENST00000543872 LGR6Q9HBX8 967 aa14.46□□□□□ -0.1
SMG8-202ENST00000543872 RIMS1Q86UR5 1692 aaKnown RBP14.45□□□□□ -0.1
SMG8-202ENST00000543872 KIF28PB7ZC32 967 aa14.45□□□□□ -0.1
SMG8-202ENST00000543872 ZMYND10O75800 440 aa14.45□□□□□ -0.1
SMG8-202ENST00000543872 PROSER3Q2NL68 480 aa14.45□□□□□ -0.1
SMG8-202ENST00000543872 FAM43BQ6ZT52 329 aaPredicted RBP14.45□□□□□ -0.1
SMG8-202ENST00000543872 CNKSR2Q8WXI2 1034 aa14.45□□□□□ -0.1
SMG8-202ENST00000543872 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.45□□□□□ -0.1
SMG8-202ENST00000543872 EXOC5O00471 708 aa14.45□□□□□ -0.1
SMG8-202ENST00000543872 ATP6V1AP38606 617 aa14.45□□□□□ -0.1
SMG8-202ENST00000543872 USP5P45974 858 aa14.45□□□□□ -0.1
SMG8-202ENST00000543872 LONRF3Q496Y0 759 aa14.45□□□□□ -0.1
SMG8-202ENST00000543872 RAD9BQ6WBX8 426 aa14.45□□□□□ -0.1
SMG8-202ENST00000543872 SUGP1Q8IWZ8 645 aaKnown RBP14.45□□□□□ -0.1
SMG8-202ENST00000543872 MSANTD4Q8NCY6 345 aa14.45□□□□□ -0.1
SMG8-202ENST00000543872 HMGB1P09429 215 aaKnown RBP14.45□□□□□ -0.1
SMG8-202ENST00000543872 EIF5P55010 431 aaKnown RBP14.45□□□□□ -0.1
SMG8-202ENST00000543872 TTC19Q6DKK2 380 aaPredicted RBP14.45□□□□□ -0.1
SMG8-202ENST00000543872 NCAPH2Q6IBW4 605 aa14.45□□□□□ -0.1
SMG8-202ENST00000543872 FOXP4Q8IVH2 680 aaPredicted RBP14.45□□□□□ -0.1
SMG8-202ENST00000543872 SGSM3Q96HU1 749 aa14.45□□□□□ -0.1
SMG8-202ENST00000543872 EHD4Q9H223 541 aa14.45□□□□□ -0.1
SMG8-202ENST00000543872 POLR3EQ9NVU0 708 aa14.45□□□□□ -0.1
SMG8-202ENST00000543872 RAI14Q9P0K7 980 aa14.45□□□□□ -0.1
SMG8-202ENST00000543872 ABL1P00519 1130 aa14.44□□□□□ -0.1
SMG8-202ENST00000543872 HNRNPH1P31943 449 aaKnown RBP14.44□□□□□ -0.1
SMG8-202ENST00000543872 HAND2P61296 217 aa14.44□□□□□ -0.1
SMG8-202ENST00000543872 PPFIBP1Q86W92 1011 aa14.44□□□□□ -0.1
SMG8-202ENST00000543872 IGSF22Q8N9C0 903 aa14.44□□□□□ -0.1
SMG8-202ENST00000543872 C19orf44Q9H6X5 657 aa14.44□□□□□ -0.1
SMG8-202ENST00000543872 SAMSN1Q9NSI8 373 aaKnown RBP14.44□□□□□ -0.1
SMG8-202ENST00000543872 ADGRG1Q9Y653 693 aa14.44□□□□□ -0.1
SMG8-202ENST00000543872 CCDC189A1A4V9 331 aa14.44□□□□□ -0.1
SMG8-202ENST00000543872 EIF4A1P60842 406 aaKnown RBP14.44□□□□□ -0.1
SMG8-202ENST00000543872 TBX2Q13207 712 aaPredicted RBP14.44□□□□□ -0.1
SMG8-202ENST00000543872 PPP2R5AQ15172 486 aa14.44□□□□□ -0.1
SMG8-202ENST00000543872 HSP90AB3PQ58FF7 597 aa14.44□□□□□ -0.1
SMG8-202ENST00000543872 MED4Q9NPJ6 270 aa14.44□□□□□ -0.1
SMG8-202ENST00000543872 SETD1AO15047 1707 aaKnown RBP14.44□□□□□ -0.1
SMG8-202ENST00000543872 AKR1B15C9JRZ8 316 aaPredicted RBP14.43□□□□□ -0.1
SMG8-202ENST00000543872 E7EWF7 191 aa14.43□□□□□ -0.1
SMG8-202ENST00000543872 GRM8O00222 908 aa14.43□□□□□ -0.1
SMG8-202ENST00000543872 EBAG9O00559 213 aa14.43□□□□□ -0.1
SMG8-202ENST00000543872 KIF1CO43896 1103 aaKnown RBP14.43□□□□□ -0.1
SMG8-202ENST00000543872 TUBE1Q9UJT0 475 aa14.43□□□□□ -0.1
SMG8-202ENST00000543872 DBNLQ9UJU6 430 aaKnown RBP14.43□□□□□ -0.1
SMG8-202ENST00000543872 MYO5BQ9ULV0 1848 aa14.43□□□□□ -0.1
SMG8-202ENST00000543872 CCDC102BQ68D86 513 aa14.43□□□□□ -0.1
SMG8-202ENST00000543872 ACRBPQ8NEB7 543 aa14.43□□□□□ -0.1
SMG8-202ENST00000543872 AIFM3Q96NN9 605 aa14.43□□□□□ -0.1
SMG8-202ENST00000543872 FAM169AQ9Y6X4 670 aa14.43□□□□□ -0.1
SMG8-202ENST00000543872 TEX33O43247 280 aa14.43□□□□□ -0.1
SMG8-202ENST00000543872 FMR1Q06787 632 aaKnown RBP eCLIP14.43□□□□□ -0.19e-6■■■■□ 20.6
SMG8-202ENST00000543872 KLHL10Q6JEL2 608 aa14.43□□□□□ -0.1
SMG8-202ENST00000543872 KAZALD1Q96I82 304 aa14.43□□□□□ -0.1
SMG8-202ENST00000543872 HOOK1Q9UJC3 728 aaKnown RBP14.43□□□□□ -0.1
SMG8-202ENST00000543872 H0YHG0 523 aa14.42□□□□□ -0.1
SMG8-202ENST00000543872 SHC4Q6S5L8 630 aa14.42□□□□□ -0.1
SMG8-202ENST00000543872 METTL16Q86W50 562 aaKnown RBP14.42□□□□□ -0.1
SMG8-202ENST00000543872 CEP89Q96ST8 783 aa14.42□□□□□ -0.1
SMG8-202ENST00000543872 DBNDD2Q9BQY9 259 aa14.42□□□□□ -0.1
SMG8-202ENST00000543872 SAMM50Q9Y512 469 aa14.42□□□□□ -0.1
SMG8-202ENST00000543872 PXDNLA1KZ92 1463 aa14.42□□□□□ -0.1
SMG8-202ENST00000543872 BMP6P22004 513 aa14.42□□□□□ -0.1
SMG8-202ENST00000543872 EXOSC10Q01780 885 aaKnown RBP14.42□□□□□ -0.1
SMG8-202ENST00000543872 ZNF609O15014 1411 aa14.42□□□□□ -0.1
SMG8-202ENST00000543872 KLF18A0A0U1RQI7 1052 aa14.42□□□□□ -0.1
SMG8-202ENST00000543872 GOLGA8BA8MQT2 603 aa14.42□□□□□ -0.1
SMG8-202ENST00000543872 SYF2O95926 243 aaKnown RBP14.42□□□□□ -0.1
SMG8-202ENST00000543872 RBL2Q08999 1139 aa14.42□□□□□ -0.1
SMG8-202ENST00000543872 TFCP2Q12800 502 aa14.42□□□□□ -0.1
SMG8-202ENST00000543872 SWT1Q5T5J6 900 aaKnown RBP14.42□□□□□ -0.1
SMG8-202ENST00000543872 GSPT2Q8IYD1 628 aaKnown RBP14.42□□□□□ -0.1
SMG8-202ENST00000543872 CHD2O14647 1828 aaKnown RBP14.41□□□□□ -0.1
SMG8-202ENST00000543872 STX17P56962 302 aa14.41□□□□□ -0.1
SMG8-202ENST00000543872 NEUROD6Q96NK8 337 aa14.41□□□□□ -0.1
SMG8-202ENST00000543872 JPH2Q9BR39 696 aaPredicted RBP14.41□□□□□ -0.1
SMG8-202ENST00000543872 CRACR2AQ9BSW2 395 aa14.41□□□□□ -0.1
SMG8-202ENST00000543872 IGSF1Q8N6C5 1336 aa14.41□□□□□ -0.1
SMG8-202ENST00000543872 SLC39A14Q15043 492 aa14.41□□□□□ -0.1
SMG8-202ENST00000543872 KSR2Q6VAB6 950 aa14.41□□□□□ -0.1
SMG8-202ENST00000543872 CCDC148Q8NFR7 591 aa14.41□□□□□ -0.1
SMG8-202ENST00000543872 NAPGQ99747 312 aaPredicted RBP14.41□□□□□ -0.1
SMG8-202ENST00000543872 KAT14Q9H8E8 782 aa14.41□□□□□ -0.1
SMG8-202ENST00000543872 SALL1Q9NSC2 1324 aa14.41□□□□□ -0.1
SMG8-202ENST00000543872 METP08581 1390 aa14.41□□□□□ -0.1
SMG8-202ENST00000543872 PRAMEF22A3QJZ6 481 aa14.4□□□□□ -0.1
SMG8-202ENST00000543872 CPP00450 1065 aa14.4□□□□□ -0.1
SMG8-202ENST00000543872 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.4□□□□□ -0.1
SMG8-202ENST00000543872 GRAMD1CQ8IYS0 662 aa14.4□□□□□ -0.1
SMG8-202ENST00000543872 CEP120Q8N960 986 aa14.4□□□□□ -0.1
SMG8-202ENST00000543872 BCAS4Q8TDM0 211 aa14.4□□□□□ -0.1
SMG8-202ENST00000543872 ZNF274Q96GC6 653 aaPredicted RBP14.4□□□□□ -0.1
SMG8-202ENST00000543872 DBF4Q9UBU7 674 aaPredicted RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms