RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 ANO6Q4KMQ2 910 aa16.24■□□□□ 0.19
MSH2-206ENST00000543555 METAP2P50579 478 aaKnown RBP eCLIP16.24■□□□□ 0.19
MSH2-206ENST00000543555 PLCB2Q00722 1185 aa16.24■□□□□ 0.19
MSH2-206ENST00000543555 ERFEQ4G0M1 354 aa16.24■□□□□ 0.19
MSH2-206ENST00000543555 SASS6Q6UVJ0 657 aa16.24■□□□□ 0.19
MSH2-206ENST00000543555 RTEL1Q9NZ71 1219 aa16.24■□□□□ 0.19
MSH2-206ENST00000543555 GSG1L2A8MUP6 293 aa16.23■□□□□ 0.19
MSH2-206ENST00000543555 APOA5Q6Q788 366 aa16.23■□□□□ 0.19
MSH2-206ENST00000543555 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.23■□□□□ 0.19
MSH2-206ENST00000543555 GOLPH3LQ9H4A5 285 aa16.23■□□□□ 0.19
MSH2-206ENST00000543555 PNPLA7Q6ZV29 1317 aa16.23■□□□□ 0.19
MSH2-206ENST00000543555 GNAT2P19087 354 aa16.23■□□□□ 0.19
MSH2-206ENST00000543555 TXNRD1Q16881 649 aa16.23■□□□□ 0.19
MSH2-206ENST00000543555 RGS22Q8NE09 1264 aa16.23■□□□□ 0.19
MSH2-206ENST00000543555 IGDCC4Q8TDY8 1250 aa16.23■□□□□ 0.19
MSH2-206ENST00000543555 ME1P48163 572 aa16.22■□□□□ 0.19
MSH2-206ENST00000543555 SF3B3Q15393 1217 aaKnown RBP16.22■□□□□ 0.19
MSH2-206ENST00000543555 CCDC73Q6ZRK6 1079 aa16.22■□□□□ 0.19
MSH2-206ENST00000543555 LCORLQ8N3X6 602 aa16.22■□□□□ 0.19
MSH2-206ENST00000543555 TIAM2Q8IVF5 1701 aa16.22■□□□□ 0.19
MSH2-206ENST00000543555 CTDSPL2Q05D32 466 aa16.22■□□□□ 0.19
MSH2-206ENST00000543555 C3orf67Q6ZVT6 689 aa16.22■□□□□ 0.19
MSH2-206ENST00000543555 BRAPQ7Z569 592 aa16.22■□□□□ 0.19
MSH2-206ENST00000543555 LUZP1Q86V48 1076 aa16.22■□□□□ 0.19
MSH2-206ENST00000543555 SGMS1Q86VZ5 419 aa16.22■□□□□ 0.19
MSH2-206ENST00000543555 ANKRD18AQ8IVF6 992 aa16.22■□□□□ 0.19
MSH2-206ENST00000543555 CBX8Q9HC52 389 aa16.22■□□□□ 0.19
MSH2-206ENST00000543555 SENP2Q9HC62 589 aa16.22■□□□□ 0.19
MSH2-206ENST00000543555 GJB4Q9NTQ9 266 aa16.22■□□□□ 0.19
MSH2-206ENST00000543555 ZNF804BA4D1E1 1349 aa16.22■□□□□ 0.19
MSH2-206ENST00000543555 CNTNAP4Q9C0A0 1308 aa16.22■□□□□ 0.19
MSH2-206ENST00000543555 CTAGE5O15320 804 aa16.21■□□□□ 0.19
MSH2-206ENST00000543555 CDKL5O76039 1030 aa16.21■□□□□ 0.19
MSH2-206ENST00000543555 SNW1Q13573 536 aaKnown RBP16.21■□□□□ 0.19
MSH2-206ENST00000543555 CNNM2Q9H8M5 875 aa16.21■□□□□ 0.19
MSH2-206ENST00000543555 LY9Q9HBG7 655 aa16.21■□□□□ 0.19
MSH2-206ENST00000543555 INCENPQ9NQS7 918 aa16.21■□□□□ 0.19
MSH2-206ENST00000543555 LRP2BPQ9P2M1 347 aa16.21■□□□□ 0.19
MSH2-206ENST00000543555 PRKAB2O43741 272 aa16.21■□□□□ 0.19
MSH2-206ENST00000543555 TMEM67Q5HYA8 995 aa16.21■□□□□ 0.19
MSH2-206ENST00000543555 MPNDQ8N594 471 aa16.21■□□□□ 0.19
MSH2-206ENST00000543555 ENGASEQ8NFI3 743 aa16.21■□□□□ 0.19
MSH2-206ENST00000543555 NACAP1Q9BZK3 213 aa16.21■□□□□ 0.19
MSH2-206ENST00000543555 ZBTB43O43298 467 aa16.21■□□□□ 0.18
MSH2-206ENST00000543555 POLR3DP05423 398 aaPredicted RBP16.21■□□□□ 0.18
MSH2-206ENST00000543555 RXRAP19793 462 aa16.21■□□□□ 0.18
MSH2-206ENST00000543555 FAM160A1Q05DH4 1040 aa16.21■□□□□ 0.18
MSH2-206ENST00000543555 EZH2Q15910 746 aaKnown RBP16.21■□□□□ 0.18
MSH2-206ENST00000543555 AKNAD1Q5T1N1 836 aa16.21■□□□□ 0.18
MSH2-206ENST00000543555 MYSM1Q5VVJ2 828 aa16.21■□□□□ 0.18
MSH2-206ENST00000543555 CPLX2Q6PUV4 134 aaKnown RBP16.21■□□□□ 0.18
MSH2-206ENST00000543555 MICU3Q86XE3 530 aa16.21■□□□□ 0.18
MSH2-206ENST00000543555 LINC00301Q8NCQ3 95 aa16.21■□□□□ 0.18
MSH2-206ENST00000543555 ZSWIM5Q9P217 1185 aa16.21■□□□□ 0.18
MSH2-206ENST00000543555 PCDHA7Q9UN72 937 aa16.21■□□□□ 0.18
MSH2-206ENST00000543555 TACC3Q9Y6A5 838 aa16.21■□□□□ 0.18
MSH2-206ENST00000543555 SLC4A4Q9Y6R1 1079 aa16.21■□□□□ 0.18
MSH2-206ENST00000543555 RGL2O15211 777 aa16.2■□□□□ 0.18
MSH2-206ENST00000543555 CDC27P30260 824 aa16.2■□□□□ 0.18
MSH2-206ENST00000543555 LIFRP42702 1097 aa16.2■□□□□ 0.18
MSH2-206ENST00000543555 KIF23Q02241 960 aaPredicted RBP16.2■□□□□ 0.18
MSH2-206ENST00000543555 NFXL1Q6ZNB6 911 aa16.2■□□□□ 0.18
MSH2-206ENST00000543555 FSIP1Q8NA03 581 aa16.2■□□□□ 0.18
MSH2-206ENST00000543555 POLR3EQ9NVU0 708 aa16.2■□□□□ 0.18
MSH2-206ENST00000543555 SBF2Q86WG5 1849 aa16.2■□□□□ 0.18
MSH2-206ENST00000543555 YEATS4O95619 227 aa16.2■□□□□ 0.18
MSH2-206ENST00000543555 TDO2P48775 406 aa16.2■□□□□ 0.18
MSH2-206ENST00000543555 KRT23Q9C075 422 aa16.2■□□□□ 0.18
MSH2-206ENST00000543555 BSDC1Q9NW68 430 aaPredicted RBP16.2■□□□□ 0.18
MSH2-206ENST00000543555 IQSEC3Q9UPP2 1182 aaPredicted RBP16.2■□□□□ 0.18
MSH2-206ENST00000543555 CLIC4Q9Y696 253 aa16.2■□□□□ 0.18
MSH2-206ENST00000543555 KIF28PB7ZC32 967 aa16.19■□□□□ 0.18
MSH2-206ENST00000543555 KINO60870 393 aaKnown RBP16.19■□□□□ 0.18
MSH2-206ENST00000543555 KIAA2012Q0VF49 1180 aa16.19■□□□□ 0.18
MSH2-206ENST00000543555 UBE4AQ14139 1066 aa16.19■□□□□ 0.18
MSH2-206ENST00000543555 STK38Q15208 465 aa16.19■□□□□ 0.18
MSH2-206ENST00000543555 ADALQ6DHV7 355 aa16.19■□□□□ 0.18
MSH2-206ENST00000543555 MIGA1Q8NAN2 632 aa16.19■□□□□ 0.18
MSH2-206ENST00000543555 ARHGEF1Q92888 912 aaKnown RBP16.19■□□□□ 0.18
MSH2-206ENST00000543555 ALG1Q9BT22 464 aa16.19■□□□□ 0.18
MSH2-206ENST00000543555 DNAJC25Q9H1X3 360 aa16.19■□□□□ 0.18
MSH2-206ENST00000543555 SCN7AQ01118 1682 aa16.19■□□□□ 0.18
MSH2-206ENST00000543555 A0A1W2PQ27 194 aa16.19■□□□□ 0.18
MSH2-206ENST00000543555 A0A1W2PQ64 194 aa16.19■□□□□ 0.18
MSH2-206ENST00000543555 A0A1W2PQD8 194 aa16.19■□□□□ 0.18
MSH2-206ENST00000543555 GOLGA8AA7E2F4 631 aa16.19■□□□□ 0.18
MSH2-206ENST00000543555 CAVIN2O95810 425 aa16.19■□□□□ 0.18
MSH2-206ENST00000543555 ZNF165P49910 485 aa16.19■□□□□ 0.18
MSH2-206ENST00000543555 MFSD6Q6ZSS7 791 aa16.19■□□□□ 0.18
MSH2-206ENST00000543555 TDRD7Q8NHU6 1098 aaKnown RBP16.19■□□□□ 0.18
MSH2-206ENST00000543555 KCNG4Q8TDN1 519 aa16.19■□□□□ 0.18
MSH2-206ENST00000543555 STAG1Q8WVM7 1258 aa16.19■□□□□ 0.18
MSH2-206ENST00000543555 MRPS27Q92552 414 aaKnown RBP16.19■□□□□ 0.18
MSH2-206ENST00000543555 GNL3LQ9NVN8 582 aaKnown RBP16.19■□□□□ 0.18
MSH2-206ENST00000543555 A0A1B0GUL6 1792 aa16.19■□□□□ 0.18
MSH2-206ENST00000543555 IFIT3O14879 490 aaKnown RBP16.19■□□□□ 0.18
MSH2-206ENST00000543555 GYG1P46976 350 aa16.19■□□□□ 0.18
MSH2-206ENST00000543555 NTRK3Q16288 839 aa16.19■□□□□ 0.18
MSH2-206ENST00000543555 TBC1D9BQ66K14 1250 aa16.19■□□□□ 0.18
MSH2-206ENST00000543555 ZNF830Q96NB3 372 aaPredicted RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms