RNA–Protein interactions for RNA: ENST00000543079.1

PAAF1-212, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-212ENST00000543079 COL26A1Q96A83 441 aa9.63□□□□□ -0.87
PAAF1-212ENST00000543079 BTG4Q9NY30 223 aa9.63□□□□□ -0.87
PAAF1-212ENST00000543079 NAGPAQ9UK23 515 aa9.63□□□□□ -0.87
PAAF1-212ENST00000543079 RTCBQ9Y3I0 505 aaKnown RBP9.63□□□□□ -0.87
PAAF1-212ENST00000543079 YTHDC2Q9H6S0 1430 aaKnown RBP9.63□□□□□ -0.87
PAAF1-212ENST00000543079 ROCK2O75116 1388 aaKnown RBP9.63□□□□□ -0.87
PAAF1-212ENST00000543079 EGFRP00533 1210 aa9.62□□□□□ -0.87
PAAF1-212ENST00000543079 AFF1P51825 1210 aaKnown RBP9.62□□□□□ -0.87
PAAF1-212ENST00000543079 DHX32Q7L7V1 743 aaKnown RBP9.62□□□□□ -0.87
PAAF1-212ENST00000543079 TREML1Q86YW5 311 aa9.62□□□□□ -0.87
PAAF1-212ENST00000543079 TRPM4Q8TD43 1214 aa9.62□□□□□ -0.87
PAAF1-212ENST00000543079 NACC1Q96RE7 527 aa9.62□□□□□ -0.87
PAAF1-212ENST00000543079 ABCC11Q96J66 1382 aa9.62□□□□□ -0.87
PAAF1-212ENST00000543079 ZBTB42B2RXF5 422 aa9.61□□□□□ -0.87
PAAF1-212ENST00000543079 RGS9O75916 674 aaPredicted RBP9.61□□□□□ -0.87
PAAF1-212ENST00000543079 SASH3O75995 380 aa9.61□□□□□ -0.87
PAAF1-212ENST00000543079 KRT25Q7Z3Z0 450 aa9.61□□□□□ -0.87
PAAF1-212ENST00000543079 SYT17Q9BSW7 474 aa9.61□□□□□ -0.87
PAAF1-212ENST00000543079 CARD11Q9BXL7 1154 aa9.61□□□□□ -0.87
PAAF1-212ENST00000543079 PDGFDQ9GZP0 370 aaPredicted RBP9.61□□□□□ -0.87
PAAF1-212ENST00000543079 STK26Q9P289 416 aa9.61□□□□□ -0.87
PAAF1-212ENST00000543079 TECPR2O15040 1411 aa9.61□□□□□ -0.87
PAAF1-212ENST00000543079 RGPD1P0DJD0 1748 aa9.61□□□□□ -0.87
PAAF1-212ENST00000543079 SPATA31A5Q5VU36 1347 aa9.6□□□□□ -0.87
PAAF1-212ENST00000543079 SPATA31A7Q8IWB4 1347 aa9.6□□□□□ -0.87
PAAF1-212ENST00000543079 ZBTB7AO95365 584 aa9.6□□□□□ -0.87
PAAF1-212ENST00000543079 RARAP10276 462 aa9.6□□□□□ -0.87
PAAF1-212ENST00000543079 DOC2BQ14184 412 aa9.6□□□□□ -0.87
PAAF1-212ENST00000543079 GRIK4Q16099 956 aa9.6□□□□□ -0.87
PAAF1-212ENST00000543079 C16orf46Q6P387 395 aa9.6□□□□□ -0.87
PAAF1-212ENST00000543079 FAM35AQ86V20 835 aa9.6□□□□□ -0.87
PAAF1-212ENST00000543079 FRRS1LQ9P0K9 344 aa9.6□□□□□ -0.87
PAAF1-212ENST00000543079 CXXC1Q9P0U4 656 aaPredicted RBP9.6□□□□□ -0.87
PAAF1-212ENST00000543079 SERPINA10Q9UK55 444 aa9.6□□□□□ -0.87
PAAF1-212ENST00000543079 A0A0A0MRY4 1105 aa9.59□□□□□ -0.87
PAAF1-212ENST00000543079 BRD2P25440 801 aaKnown RBP9.59□□□□□ -0.87
PAAF1-212ENST00000543079 TMEM164Q5U3C3 297 aa9.59□□□□□ -0.87
PAAF1-212ENST00000543079 PBXIP1Q96AQ6 731 aa9.59□□□□□ -0.87
PAAF1-212ENST00000543079 CCDC97Q96F63 343 aaPredicted RBP9.59□□□□□ -0.87
PAAF1-212ENST00000543079 SAP130Q9H0E3 1048 aa9.59□□□□□ -0.87
PAAF1-212ENST00000543079 TRAK1Q9UPV9 953 aa9.59□□□□□ -0.87
PAAF1-212ENST00000543079 USP20Q9Y2K6 914 aa9.59□□□□□ -0.87
PAAF1-212ENST00000543079 USP32Q8NFA0 1604 aa9.59□□□□□ -0.87
PAAF1-212ENST00000543079 XYLBO75191 536 aa9.58□□□□□ -0.88
PAAF1-212ENST00000543079 CPB1P15086 417 aa9.58□□□□□ -0.88
PAAF1-212ENST00000543079 ARID4AP29374 1257 aaPredicted RBP9.58□□□□□ -0.88
PAAF1-212ENST00000543079 GPLD1P80108 840 aa9.58□□□□□ -0.88
PAAF1-212ENST00000543079 WAPLQ7Z5K2 1190 aa9.58□□□□□ -0.88
PAAF1-212ENST00000543079 RGL4Q8IZJ4 473 aa9.58□□□□□ -0.88
PAAF1-212ENST00000543079 CMTR1Q8N1G2 835 aaKnown RBP9.58□□□□□ -0.88
PAAF1-212ENST00000543079 TTC9Q92623 222 aa9.58□□□□□ -0.88
PAAF1-212ENST00000543079 CLP1Q92989 425 aaKnown RBP9.58□□□□□ -0.88
PAAF1-212ENST00000543079 LPIN3Q9BQK8 851 aa9.58□□□□□ -0.88
PAAF1-212ENST00000543079 TLR7Q9NYK1 1049 aaKnown RBP9.58□□□□□ -0.88
PAAF1-212ENST00000543079 PLEKHH1Q9ULM0 1364 aa9.58□□□□□ -0.88
PAAF1-212ENST00000543079 DLC1Q96QB1 1528 aa9.57□□□□□ -0.88
PAAF1-212ENST00000543079 TNS1Q9HBL0 1735 aaKnown RBP9.57□□□□□ -0.88
PAAF1-212ENST00000543079 C9orf172C9J069 976 aa9.57□□□□□ -0.88
PAAF1-212ENST00000543079 PTCD1O75127 700 aaKnown RBP9.57□□□□□ -0.88
PAAF1-212ENST00000543079 ELNP15502 786 aa9.57□□□□□ -0.88
PAAF1-212ENST00000543079 NRLP54845 237 aa9.57□□□□□ -0.88
PAAF1-212ENST00000543079 RAC1P63000 192 aa9.57□□□□□ -0.88
PAAF1-212ENST00000543079 PERM1Q5SV97 790 aa9.57□□□□□ -0.88
PAAF1-212ENST00000543079 ETFBKMTQ8IXQ9 262 aa9.57□□□□□ -0.88
PAAF1-212ENST00000543079 PRAM1Q96QH2 718 aa9.57□□□□□ -0.88
PAAF1-212ENST00000543079 KCNMB2Q9Y691 235 aa9.57□□□□□ -0.88
PAAF1-212ENST00000543079 USP47Q96K76 1375 aa9.57□□□□□ -0.88
PAAF1-212ENST00000543079 KNDC1Q76NI1 1749 aa9.56□□□□□ -0.88
PAAF1-212ENST00000543079 PDE3BQ13370 1112 aa9.56□□□□□ -0.88
PAAF1-212ENST00000543079 DMRTC2Q8IXT2 367 aaPredicted RBP9.56□□□□□ -0.88
PAAF1-212ENST00000543079 CEP350Q5VT06 3117 aa9.56□□□□□ -0.88
PAAF1-212ENST00000543079 ST20-MTHFSA0A0A6YYL1 179 aa9.55□□□□□ -0.88
PAAF1-212ENST00000543079 HSPA5P11021 654 aaKnown RBP9.55□□□□□ -0.88
PAAF1-212ENST00000543079 SELPP16109 830 aa9.55□□□□□ -0.88
PAAF1-212ENST00000543079 GRIK5Q16478 980 aa9.55□□□□□ -0.88
PAAF1-212ENST00000543079 GPR162Q16538 588 aa9.55□□□□□ -0.88
PAAF1-212ENST00000543079 MSL1Q68DK7 614 aa9.55□□□□□ -0.88
PAAF1-212ENST00000543079 ELMSAN1Q6PJG2 1045 aa9.55□□□□□ -0.88
PAAF1-212ENST00000543079 CAPN12Q6ZSI9 719 aa9.55□□□□□ -0.88
PAAF1-212ENST00000543079 TESK2Q96S53 571 aa9.55□□□□□ -0.88
PAAF1-212ENST00000543079 ARHGEF28Q8N1W1 1705 aaKnown RBP9.55□□□□□ -0.88
PAAF1-212ENST00000543079 ADGRB2O60241 1585 aa9.54□□□□□ -0.88
PAAF1-212ENST00000543079 NWD2Q9ULI1 1742 aa9.54□□□□□ -0.88
PAAF1-212ENST00000543079 TNFRSF10BO14763 440 aa9.54□□□□□ -0.88
PAAF1-212ENST00000543079 HSPA6P17066 643 aa9.54□□□□□ -0.88
PAAF1-212ENST00000543079 MLLT1Q03111 559 aaPredicted RBP9.54□□□□□ -0.88
PAAF1-212ENST00000543079 SAFB2Q14151 953 aaKnown RBP eCLIP9.54□□□□□ -0.88
PAAF1-212ENST00000543079 FAM26DQ5JW98 314 aa9.54□□□□□ -0.88
PAAF1-212ENST00000543079 FMR1NBQ8N0W7 255 aaPredicted RBP9.54□□□□□ -0.88
PAAF1-212ENST00000543079 LENG1Q96BZ8 264 aaPredicted RBP9.54□□□□□ -0.88
PAAF1-212ENST00000543079 MKNK1Q9BUB5 465 aa9.54□□□□□ -0.88
PAAF1-212ENST00000543079 TNS3Q68CZ2 1445 aa9.54□□□□□ -0.88
PAAF1-212ENST00000543079 PLCH1Q4KWH8 1693 aa9.54□□□□□ -0.88
PAAF1-212ENST00000543079 SPATA31A1Q5TZJ5 1347 aa9.54□□□□□ -0.88
PAAF1-212ENST00000543079 CENPJQ9HC77 1338 aaPredicted RBP9.54□□□□□ -0.88
PAAF1-212ENST00000543079 PLAURQ03405 335 aa9.53□□□□□ -0.88
PAAF1-212ENST00000543079 ADGRE1Q14246 886 aa9.53□□□□□ -0.88
PAAF1-212ENST00000543079 NAA30Q147X3 362 aaPredicted RBP9.53□□□□□ -0.88
PAAF1-212ENST00000543079 DTWD1Q8N5C7 304 aa9.53□□□□□ -0.88
PAAF1-212ENST00000543079 HIRIP3Q9BW71 556 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms