RNA–Protein interactions for RNA: ENST00000543049.1

NLRC5-222, Transcript of NLR family CARD domain containing 5, human

TSL 2

Gene NLRC5, Length 484 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NLRC5-222	ENST00000543049	MIGA2	Q7L4E1	593 aa		13.34	□□□□□ -0.27
NLRC5-222	ENST00000543049	COA7	Q96BR5	231 aa		13.34	□□□□□ -0.27
NLRC5-222	ENST00000543049	MPHOSPH8	Q99549	860 aa		13.34	□□□□□ -0.27
NLRC5-222	ENST00000543049	MAPK8IP3	Q9UPT6	1336 aa		13.34	□□□□□ -0.27
NLRC5-222	ENST00000543049	ARAP2	Q8WZ64	1704 aa		13.33	□□□□□ -0.27
NLRC5-222	ENST00000543049	TAF5L	O75529	589 aa		13.33	□□□□□ -0.28
NLRC5-222	ENST00000543049	HMGCR	P04035	888 aa		13.33	□□□□□ -0.28
NLRC5-222	ENST00000543049	RIPK4	P57078	832 aa		13.33	□□□□□ -0.28
NLRC5-222	ENST00000543049	CHRND	Q07001	517 aa		13.33	□□□□□ -0.28
NLRC5-222	ENST00000543049	SHH	Q15465	462 aa		13.33	□□□□□ -0.28
NLRC5-222	ENST00000543049	ZNF804A	Q7Z570	1209 aa		13.33	□□□□□ -0.28
NLRC5-222	ENST00000543049	ADAMTS19	Q8TE59	1207 aa		13.33	□□□□□ -0.28
NLRC5-222	ENST00000543049	PHAX	Q9H814	394 aa	Known RBP	13.33	□□□□□ -0.28
NLRC5-222	ENST00000543049	LAS1L	Q9Y4W2	734 aa	Known RBP	13.33	□□□□□ -0.28
NLRC5-222	ENST00000543049	COL6A1	P12109	1028 aa		13.32	□□□□□ -0.28
NLRC5-222	ENST00000543049	CRK	P46108	304 aa		13.32	□□□□□ -0.28
NLRC5-222	ENST00000543049	DCAF15	Q66K64	600 aa		13.32	□□□□□ -0.28
NLRC5-222	ENST00000543049	HOOK2	Q96ED9	719 aa		13.32	□□□□□ -0.28
NLRC5-222	ENST00000543049	ZNF341	Q9BYN7	854 aa		13.32	□□□□□ -0.28
NLRC5-222	ENST00000543049	ARIH1	Q9Y4X5	557 aa	Predicted RBP	13.32	□□□□□ -0.28
NLRC5-222	ENST00000543049	MFSD14B	Q5SR56	506 aa		13.31	□□□□□ -0.28
NLRC5-222	ENST00000543049	C9orf50	Q5SZB4	431 aa		13.31	□□□□□ -0.28
NLRC5-222	ENST00000543049	C15orf52	Q6ZUT6	534 aa	Known RBP	13.31	□□□□□ -0.28
NLRC5-222	ENST00000543049	UHRF1	Q96T88	793 aa	Predicted RBP	13.31	□□□□□ -0.28
NLRC5-222	ENST00000543049	C1QTNF1	Q9BXJ1	281 aa		13.31	□□□□□ -0.28
NLRC5-222	ENST00000543049	HCN4	Q9Y3Q4	1203 aa		13.31	□□□□□ -0.28
NLRC5-222	ENST00000543049	CHL1	O00533	1208 aa		13.3	□□□□□ -0.28
NLRC5-222	ENST00000543049	ITGA6	P23229	1130 aa		13.3	□□□□□ -0.28
NLRC5-222	ENST00000543049	SMAD3	P84022	425 aa	Known RBP	13.3	□□□□□ -0.28
NLRC5-222	ENST00000543049	ALYREF	Q86V81	257 aa	Known RBP	13.3	□□□□□ -0.28
NLRC5-222	ENST00000543049	ATXN2L	Q8WWM7	1075 aa	Known RBP	13.3	□□□□□ -0.28
NLRC5-222	ENST00000543049	PPM1E	Q8WY54	764 aa		13.3	□□□□□ -0.28
NLRC5-222	ENST00000543049	ASB2	Q96Q27	587 aa		13.3	□□□□□ -0.28
NLRC5-222	ENST00000543049	METTL22	Q9BUU2	404 aa	Predicted RBP	13.3	□□□□□ -0.28
NLRC5-222	ENST00000543049	CXCL11	O14625	94 aa		13.29	□□□□□ -0.28
NLRC5-222	ENST00000543049	HOXB7	P09629	217 aa		13.29	□□□□□ -0.28
NLRC5-222	ENST00000543049	ANKRD13C	Q8N6S4	541 aa		13.29	□□□□□ -0.28
NLRC5-222	ENST00000543049	SMCR8	Q8TEV9	937 aa	Predicted RBP	13.29	□□□□□ -0.28
NLRC5-222	ENST00000543049	PNN	Q9H307	717 aa	Known RBP	13.29	□□□□□ -0.28
NLRC5-222	ENST00000543049	GRIN2C	Q14957	1233 aa		13.28	□□□□□ -0.28
NLRC5-222	ENST00000543049	DUSP27	Q5VZP5	1158 aa		13.28	□□□□□ -0.28
NLRC5-222	ENST00000543049	GADL1	Q6ZQY3	521 aa		13.28	□□□□□ -0.28
NLRC5-222	ENST00000543049	FASTKD5	Q7L8L6	764 aa	Known RBP	13.28	□□□□□ -0.28
NLRC5-222	ENST00000543049	PRKAG2	Q9UGJ0	569 aa		13.28	□□□□□ -0.28
NLRC5-222	ENST00000543049	CDH23	Q9H251	3354 aa		13.28	□□□□□ -0.28
NLRC5-222	ENST00000543049	DOCK3	Q8IZD9	2030 aa		13.27	□□□□□ -0.28
NLRC5-222	ENST00000543049	FAM83A	Q86UY5	434 aa		13.27	□□□□□ -0.29
NLRC5-222	ENST00000543049	TMOD2	Q9NZR1	351 aa		13.27	□□□□□ -0.29
NLRC5-222	ENST00000543049	ZNF112	Q9UJU3	913 aa		13.27	□□□□□ -0.29
NLRC5-222	ENST00000543049	GJD2	Q9UKL4	321 aa		13.27	□□□□□ -0.29
NLRC5-222	ENST00000543049	PRKAR2A	P13861	404 aa	Known RBP	13.26	□□□□□ -0.29
NLRC5-222	ENST00000543049	MRPS5	P82675	430 aa	Known RBP	13.26	□□□□□ -0.29
NLRC5-222	ENST00000543049	TRIM26	Q12899	539 aa	Predicted RBP	13.26	□□□□□ -0.29
NLRC5-222	ENST00000543049	GRIK5	Q16478	980 aa		13.26	□□□□□ -0.29
NLRC5-222	ENST00000543049	TRIB2	Q92519	343 aa		13.26	□□□□□ -0.29
NLRC5-222	ENST00000543049	LRFN3	Q9BTN0	628 aa		13.26	□□□□□ -0.29
NLRC5-222	ENST00000543049	SENP6	Q9GZR1	1112 aa	Predicted RBP	13.26	□□□□□ -0.29
NLRC5-222	ENST00000543049	THEG	Q9P2T0	379 aa		13.26	□□□□□ -0.29
NLRC5-222	ENST00000543049	BDP1	A6H8Y1	2624 aa		13.25	□□□□□ -0.29
NLRC5-222	ENST00000543049		A0A0G2JLL6	359 aa	Predicted RBP	13.25	□□□□□ -0.29
NLRC5-222	ENST00000543049	IGKV5-2	P06315	115 aa		13.25	□□□□□ -0.29
NLRC5-222	ENST00000543049	ATN1	P54259	1190 aa	Predicted RBP	13.25	□□□□□ -0.29
NLRC5-222	ENST00000543049	LMOD3	Q0VAK6	560 aa		13.25	□□□□□ -0.29
NLRC5-222	ENST00000543049	PDE3A	Q14432	1141 aa		13.25	□□□□□ -0.29
NLRC5-222	ENST00000543049	PRRT2	Q7Z6L0	340 aa	Predicted RBP	13.25	□□□□□ -0.29
NLRC5-222	ENST00000543049	IL27	Q8NEV9	243 aa		13.25	□□□□□ -0.29
NLRC5-222	ENST00000543049	TDRD7	Q8NHU6	1098 aa	Known RBP	13.25	□□□□□ -0.29
NLRC5-222	ENST00000543049	NECAB3	Q96P71	396 aa	Predicted RBP	13.25	□□□□□ -0.29
NLRC5-222	ENST00000543049	MAP3K2	Q9Y2U5	619 aa		13.25	□□□□□ -0.29
NLRC5-222	ENST00000543049	SLC45A1	Q9Y2W3	748 aa		13.25	□□□□□ -0.29
NLRC5-222	ENST00000543049	ZHX2	Q9Y6X8	837 aa		13.25	□□□□□ -0.29
NLRC5-222	ENST00000543049	MYH3	P11055	1940 aa		13.25	□□□□□ -0.29
NLRC5-222	ENST00000543049	PLIN1	O60240	522 aa		13.24	□□□□□ -0.29
NLRC5-222	ENST00000543049	CYP2B6	P20813	491 aa		13.24	□□□□□ -0.29
NLRC5-222	ENST00000543049	TMPO	P42166	694 aa	Known RBP	13.24	□□□□□ -0.29
NLRC5-222	ENST00000543049	NOL9	Q5SY16	702 aa	Known RBP	13.24	□□□□□ -0.29
NLRC5-222	ENST00000543049	MAP3K21	Q5TCX8	1036 aa		13.24	□□□□□ -0.29
NLRC5-222	ENST00000543049	UBE3B	Q7Z3V4	1068 aa		13.24	□□□□□ -0.29
NLRC5-222	ENST00000543049	PCGF6	Q9BYE7	350 aa		13.24	□□□□□ -0.29
NLRC5-222	ENST00000543049		H7C1W4	665 aa		13.23	□□□□□ -0.29
NLRC5-222	ENST00000543049	DDX58	O95786	925 aa	Known RBP	13.23	□□□□□ -0.29
NLRC5-222	ENST00000543049	NEUROD2	Q15784	382 aa		13.23	□□□□□ -0.29
NLRC5-222	ENST00000543049	CWF19L2	Q2TBE0	894 aa	Known RBP	13.23	□□□□□ -0.29
NLRC5-222	ENST00000543049	FKBP1C	Q5VVH2	108 aa		13.23	□□□□□ -0.29
NLRC5-222	ENST00000543049	LHX8	Q68G74	356 aa		13.23	□□□□□ -0.29
NLRC5-222	ENST00000543049	TEKT1	Q969V4	418 aa		13.23	□□□□□ -0.29
NLRC5-222	ENST00000543049	ANKRD18B	A2A2Z9	1011 aa		13.22	□□□□□ -0.29
NLRC5-222	ENST00000543049	CSF1R	P07333	972 aa		13.22	□□□□□ -0.29
NLRC5-222	ENST00000543049	CCND3	P30281	292 aa	Predicted RBP	13.22	□□□□□ -0.29
NLRC5-222	ENST00000543049	GYG1	P46976	350 aa		13.22	□□□□□ -0.29
NLRC5-222	ENST00000543049	HDLBP	Q00341	1268 aa	Known RBP	13.22	□□□□□ -0.29
NLRC5-222	ENST00000543049	FAM110C	Q1W6H9	321 aa		13.22	□□□□□ -0.29
NLRC5-222	ENST00000543049	BAD	Q92934	168 aa		13.22	□□□□□ -0.29
NLRC5-222	ENST00000543049	EPHX3	Q9H6B9	360 aa		13.22	□□□□□ -0.29
NLRC5-222	ENST00000543049	HIBADH	P31937	336 aa	Known RBP	13.21	□□□□□ -0.29
NLRC5-222	ENST00000543049	RTP1	P59025	263 aa		13.21	□□□□□ -0.29
NLRC5-222	ENST00000543049	CACNB2	Q08289	660 aa	Predicted RBP	13.21	□□□□□ -0.29
NLRC5-222	ENST00000543049	TCP10	Q12799	353 aa		13.21	□□□□□ -0.29
NLRC5-222	ENST00000543049	APOBEC3H	Q6NTF7	200 aa	Known RBP	13.21	□□□□□ -0.29
NLRC5-222	ENST00000543049	POTEE	Q6S8J3	1075 aa		13.21	□□□□□ -0.29

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