RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 GRAPQ13588 217 aa16.63■□□□□ 0.25
LDB3-207ENST00000542786 TXNRD3Q86VQ6 643 aa16.63■□□□□ 0.25
LDB3-207ENST00000542786 GRAPLQ8TC17 118 aaPredicted RBP16.63■□□□□ 0.25
LDB3-207ENST00000542786 ANAPC4Q9UJX5 808 aa16.63■□□□□ 0.25
LDB3-207ENST00000542786 NAP1L2Q9ULW6 460 aaPredicted RBP16.63■□□□□ 0.25
LDB3-207ENST00000542786 MYH13Q9UKX3 1938 aa16.62■□□□□ 0.25
LDB3-207ENST00000542786 CRY2Q49AN0 593 aa16.62■□□□□ 0.25
LDB3-207ENST00000542786 APOA5Q6Q788 366 aa16.62■□□□□ 0.25
LDB3-207ENST00000542786 CNBD1Q8NA66 436 aa16.62■□□□□ 0.25
LDB3-207ENST00000542786 RGS22Q8NE09 1264 aa16.62■□□□□ 0.25
LDB3-207ENST00000542786 PGBD1Q96JS3 809 aa16.62■□□□□ 0.25
LDB3-207ENST00000542786 FUCA2Q9BTY2 467 aa16.62■□□□□ 0.25
LDB3-207ENST00000542786 TSPY26PQ9H489 355 aa16.62■□□□□ 0.25
LDB3-207ENST00000542786 FAM217BQ9NTX9 383 aaPredicted RBP16.62■□□□□ 0.25
LDB3-207ENST00000542786 RAI14Q9P0K7 980 aa16.62■□□□□ 0.25
LDB3-207ENST00000542786 ABCF2Q9UG63 623 aa16.62■□□□□ 0.25
LDB3-207ENST00000542786 MAGEB6P1A0A0J9YX57 407 aa16.61■□□□□ 0.25
LDB3-207ENST00000542786 DHX16O60231 1041 aaKnown RBP16.61■□□□□ 0.25
LDB3-207ENST00000542786 HIBADHP31937 336 aaKnown RBP16.61■□□□□ 0.25
LDB3-207ENST00000542786 KRT27Q7Z3Y8 459 aa16.61■□□□□ 0.25
LDB3-207ENST00000542786 RAB11FIP4Q86YS3 637 aa16.61■□□□□ 0.25
LDB3-207ENST00000542786 NACAP1Q9BZK3 213 aa16.61■□□□□ 0.25
LDB3-207ENST00000542786 CNNM2Q9H8M5 875 aa16.61■□□□□ 0.25
LDB3-207ENST00000542786 TFCP2L1Q9NZI6 479 aa16.61■□□□□ 0.25
LDB3-207ENST00000542786 ZSWIM5Q9P217 1185 aa16.61■□□□□ 0.25
LDB3-207ENST00000542786 KIAA1551Q9HCM1 1747 aa16.61■□□□□ 0.25
LDB3-207ENST00000542786 PPFIA3O75145 1194 aa16.61■□□□□ 0.25
LDB3-207ENST00000542786 LIG1P18858 919 aa16.61■□□□□ 0.25
LDB3-207ENST00000542786 LIFRP42702 1097 aa16.61■□□□□ 0.25
LDB3-207ENST00000542786 PROM2Q8N271 834 aa16.61■□□□□ 0.25
LDB3-207ENST00000542786 FBXO41Q8TF61 875 aa16.61■□□□□ 0.25
LDB3-207ENST00000542786 NSUN4Q96CB9 384 aaKnown RBP16.61■□□□□ 0.25
LDB3-207ENST00000542786 SPATA32Q96LK8 384 aa16.61■□□□□ 0.25
LDB3-207ENST00000542786 ECM29Q5VYK3 1845 aa16.6■□□□□ 0.25
LDB3-207ENST00000542786 KDM4AO75164 1064 aa16.6■□□□□ 0.25
LDB3-207ENST00000542786 TDO2P48775 406 aa16.6■□□□□ 0.25
LDB3-207ENST00000542786 FOSBP53539 338 aa16.6■□□□□ 0.25
LDB3-207ENST00000542786 DYNLL1P63167 89 aaKnown RBP16.6■□□□□ 0.25
LDB3-207ENST00000542786 NTRK3Q16288 839 aa16.6■□□□□ 0.25
LDB3-207ENST00000542786 C15orf52Q6ZUT6 534 aaKnown RBP16.6■□□□□ 0.25
LDB3-207ENST00000542786 VPS37DQ86XT2 251 aa16.6■□□□□ 0.25
LDB3-207ENST00000542786 MTA3Q9BTC8 594 aa16.6■□□□□ 0.25
LDB3-207ENST00000542786 BRIP1Q9BX63 1249 aa16.6■□□□□ 0.25
LDB3-207ENST00000542786 KRT23Q9C075 422 aa16.6■□□□□ 0.25
LDB3-207ENST00000542786 LETM1O95202 739 aaPredicted RBP16.59■□□□□ 0.25
LDB3-207ENST00000542786 PPARAQ07869 468 aa16.59■□□□□ 0.25
LDB3-207ENST00000542786 SDR42E1Q8WUS8 393 aa16.59■□□□□ 0.25
LDB3-207ENST00000542786 PDLIM2Q96JY6 352 aa16.59■□□□□ 0.25
LDB3-207ENST00000542786 ORC3Q9UBD5 711 aaPredicted RBP16.59■□□□□ 0.25
LDB3-207ENST00000542786 RCOR1Q9UKL0 485 aa16.59■□□□□ 0.25
LDB3-207ENST00000542786 DUOX1Q9NRD9 1551 aa16.59■□□□□ 0.25
LDB3-207ENST00000542786 SMIM22K7EJ46 135 aa16.59■□□□□ 0.25
LDB3-207ENST00000542786 TRIM37O94972 964 aa16.59■□□□□ 0.25
LDB3-207ENST00000542786 CDC27P30260 824 aa16.59■□□□□ 0.25
LDB3-207ENST00000542786 MECOMQ03112 1051 aa16.59■□□□□ 0.25
LDB3-207ENST00000542786 DDR1Q08345 913 aa16.59■□□□□ 0.25
LDB3-207ENST00000542786 CCDC173Q0VFZ6 552 aa16.59■□□□□ 0.25
LDB3-207ENST00000542786 TMEM67Q5HYA8 995 aa16.59■□□□□ 0.25
LDB3-207ENST00000542786 ATL3Q6DD88 541 aa16.59■□□□□ 0.25
LDB3-207ENST00000542786 MFSD6Q6ZSS7 791 aa16.59■□□□□ 0.25
LDB3-207ENST00000542786 FBXO18Q8NFZ0 1043 aa16.59■□□□□ 0.25
LDB3-207ENST00000542786 FGRP09769 529 aa16.58■□□□□ 0.24
LDB3-207ENST00000542786 GUCY1B3Q02153 619 aa16.58■□□□□ 0.24
LDB3-207ENST00000542786 GIMAP6Q6P9H5 292 aa16.58■□□□□ 0.24
LDB3-207ENST00000542786 TMED8Q6PL24 325 aaPredicted RBP16.58■□□□□ 0.24
LDB3-207ENST00000542786 FAM43AQ8N2R8 423 aa16.58■□□□□ 0.24
LDB3-207ENST00000542786 LEMD3Q9Y2U8 911 aa16.58■□□□□ 0.24
LDB3-207ENST00000542786 METAP2P50579 478 aaKnown RBP eCLIP16.57■□□□□ 0.24
LDB3-207ENST00000542786 OTUD7BQ6GQQ9 843 aa16.57■□□□□ 0.24
LDB3-207ENST00000542786 USP28Q96RU2 1077 aa16.57■□□□□ 0.24
LDB3-207ENST00000542786 FTOQ9C0B1 505 aaKnown RBP eCLIP16.57■□□□□ 0.24
LDB3-207ENST00000542786 LRRC37AA6NMS7 1700 aa16.57■□□□□ 0.24
LDB3-207ENST00000542786 LTBP1Q14766 1721 aa16.57■□□□□ 0.24
LDB3-207ENST00000542786 XDHP47989 1333 aa16.57■□□□□ 0.24
LDB3-207ENST00000542786 KLRG2A4D1S0 409 aaPredicted RBP16.56■□□□□ 0.24
LDB3-207ENST00000542786 SERPINB2P05120 415 aa16.56■□□□□ 0.24
LDB3-207ENST00000542786 PRDX5P30044 214 aa16.56■□□□□ 0.24
LDB3-207ENST00000542786 TDRD7Q8NHU6 1098 aaKnown RBP16.56■□□□□ 0.24
LDB3-207ENST00000542786 C8orf76Q96K31 380 aa16.56■□□□□ 0.24
LDB3-207ENST00000542786 RNF41Q9H4P4 317 aaPredicted RBP16.56■□□□□ 0.24
LDB3-207ENST00000542786 CFAP45Q9UL16 551 aa16.56■□□□□ 0.24
LDB3-207ENST00000542786 POLRMTO00411 1230 aaKnown RBP16.56■□□□□ 0.24
LDB3-207ENST00000542786 IFIT3O14879 490 aaKnown RBP16.56■□□□□ 0.24
LDB3-207ENST00000542786 ZBTB43O43298 467 aa16.56■□□□□ 0.24
LDB3-207ENST00000542786 RANBP6O60518 1105 aaKnown RBP16.56■□□□□ 0.24
LDB3-207ENST00000542786 RXRAP19793 462 aa16.56■□□□□ 0.24
LDB3-207ENST00000542786 HOXA10P31260 410 aaPredicted RBP16.56■□□□□ 0.24
LDB3-207ENST00000542786 RBM43Q6ZSC3 357 aaKnown RBP16.56■□□□□ 0.24
LDB3-207ENST00000542786 GJB4Q9NTQ9 266 aa16.56■□□□□ 0.24
LDB3-207ENST00000542786 BAZ2AQ9UIF9 1905 aaKnown RBP16.56■□□□□ 0.24
LDB3-207ENST00000542786 STK36Q9NRP7 1315 aa16.55■□□□□ 0.24
LDB3-207ENST00000542786 LAMB1P07942 1786 aa16.55■□□□□ 0.24
LDB3-207ENST00000542786 CPLX1O14810 134 aa16.55■□□□□ 0.24
LDB3-207ENST00000542786 RCAN1P53805 252 aa16.55■□□□□ 0.24
LDB3-207ENST00000542786 SEC23AQ15436 765 aa16.55■□□□□ 0.24
LDB3-207ENST00000542786 TXNRD1Q16881 649 aa16.55■□□□□ 0.24
LDB3-207ENST00000542786 TPRNQ4KMQ1 711 aa16.55■□□□□ 0.24
LDB3-207ENST00000542786 MICU3Q86XE3 530 aa16.55■□□□□ 0.24
LDB3-207ENST00000542786 NRXN2Q9P2S2 1712 aa16.55■□□□□ 0.24
LDB3-207ENST00000542786 GOLGA8AA7E2F4 631 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms