RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 CCDC86Q9H6F5 360 aaKnown RBP8.91□□□□□ -0.98
XRCC4-206ENST00000542685 PRKAG2Q9UGJ0 569 aa8.91□□□□□ -0.98
XRCC4-206ENST00000542685 AKAP2Q9Y2D5 859 aa8.91□□□□□ -0.98
XRCC4-206ENST00000542685 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.9□□□□□ -0.98
XRCC4-206ENST00000542685 SPINK2P20155 84 aa8.9□□□□□ -0.98
XRCC4-206ENST00000542685 PPP2R3AQ06190 1150 aa8.9□□□□□ -0.98
XRCC4-206ENST00000542685 KCNA1Q09470 495 aa8.9□□□□□ -0.98
XRCC4-206ENST00000542685 MAP7Q14244 749 aa8.9□□□□□ -0.98
XRCC4-206ENST00000542685 ZSCAN29Q8IWY8 852 aaPredicted RBP8.9□□□□□ -0.98
XRCC4-206ENST00000542685 PSMG3-AS1Q96PY0 264 aa8.9□□□□□ -0.98
XRCC4-206ENST00000542685 SEMA6CQ9H3T2 930 aa8.9□□□□□ -0.98
XRCC4-206ENST00000542685 LGR6Q9HBX8 967 aa8.9□□□□□ -0.98
XRCC4-206ENST00000542685 TMEM39AQ9NV64 488 aa8.9□□□□□ -0.98
XRCC4-206ENST00000542685 PPP1R9AQ9ULJ8 1098 aa8.9□□□□□ -0.98
XRCC4-206ENST00000542685 ADAMTS4O75173 837 aa8.89□□□□□ -0.99
XRCC4-206ENST00000542685 ZAR1Q86SH2 424 aa8.89□□□□□ -0.99
XRCC4-206ENST00000542685 DTX1Q86Y01 620 aa8.89□□□□□ -0.99
XRCC4-206ENST00000542685 ACSS3Q9H6R3 686 aa8.89□□□□□ -0.99
XRCC4-206ENST00000542685 DAGLAQ9Y4D2 1042 aa8.89□□□□□ -0.99
XRCC4-206ENST00000542685 CENPBP07199 599 aaPredicted RBP8.88□□□□□ -0.99
XRCC4-206ENST00000542685 GSTP1P09211 210 aaKnown RBP8.88□□□□□ -0.99
XRCC4-206ENST00000542685 XRCC5P13010 732 aaKnown RBP8.88□□□□□ -0.99
XRCC4-206ENST00000542685 SETDB2Q96T68 719 aa8.88□□□□□ -0.99
XRCC4-206ENST00000542685 METTL22Q9BUU2 404 aaPredicted RBP8.88□□□□□ -0.99
XRCC4-206ENST00000542685 FAM170BA6NMN3 283 aa8.87□□□□□ -0.99
XRCC4-206ENST00000542685 SLFN14P0C7P3 912 aa8.87□□□□□ -0.99
XRCC4-206ENST00000542685 ZEB1P37275 1124 aaPredicted RBP8.87□□□□□ -0.99
XRCC4-206ENST00000542685 GP2P55259 537 aaKnown RBP8.87□□□□□ -0.99
XRCC4-206ENST00000542685 KCNB2Q92953 911 aa8.87□□□□□ -0.99
XRCC4-206ENST00000542685 KRTAP4-8Q9BYQ9 185 aa8.87□□□□□ -0.99
XRCC4-206ENST00000542685 GSX1Q9H4S2 264 aaPredicted RBP8.87□□□□□ -0.99
XRCC4-206ENST00000542685 TMPRSS2O15393 492 aa8.86□□□□□ -0.99
XRCC4-206ENST00000542685 DYNC1LI2O43237 492 aaPredicted RBP8.86□□□□□ -0.99
XRCC4-206ENST00000542685 ZNF862O60290 1169 aa8.86□□□□□ -0.99
XRCC4-206ENST00000542685 FOSL1P15407 271 aa8.86□□□□□ -0.99
XRCC4-206ENST00000542685 GATA6Q92908 595 aa8.86□□□□□ -0.99
XRCC4-206ENST00000542685 ASB16Q96NS5 453 aa8.86□□□□□ -0.99
XRCC4-206ENST00000542685 BCL11AQ9H165 835 aa8.86□□□□□ -0.99
XRCC4-206ENST00000542685 OAS3Q9Y6K5 1087 aaKnown RBP8.86□□□□□ -0.99
XRCC4-206ENST00000542685 SYNGAP1Q96PV0 1343 aa8.85□□□□□ -0.99
XRCC4-206ENST00000542685 CYP26A1O43174 497 aa8.85□□□□□ -0.99
XRCC4-206ENST00000542685 WNT11O96014 354 aa8.85□□□□□ -0.99
XRCC4-206ENST00000542685 ID3Q02535 119 aa8.85□□□□□ -0.99
XRCC4-206ENST00000542685 FMR1Q06787 632 aaKnown RBP eCLIP8.85□□□□□ -0.99
XRCC4-206ENST00000542685 CPSF6Q16630 551 aaKnown RBP eCLIP8.85□□□□□ -0.99
XRCC4-206ENST00000542685 DUSP27Q5VZP5 1158 aa8.85□□□□□ -0.99
XRCC4-206ENST00000542685 SULF2Q8IWU5 870 aa8.85□□□□□ -0.99
XRCC4-206ENST00000542685 STK35Q8TDR2 534 aa8.85□□□□□ -0.99
XRCC4-206ENST00000542685 CRIM1Q9NZV1 1036 aa8.85□□□□□ -0.99
XRCC4-206ENST00000542685 WWC3Q9ULE0 1092 aa8.85□□□□□ -0.99
XRCC4-206ENST00000542685 KIF4BQ2VIQ3 1234 aa8.84□□□□□ -0.99
XRCC4-206ENST00000542685 ZNF765Q7L2R6 523 aa8.84□□□□□ -0.99
XRCC4-206ENST00000542685 PDZD3Q86UT5 571 aa8.84□□□□□ -0.99
XRCC4-206ENST00000542685 C3orf58Q8NDZ4 430 aa8.84□□□□□ -0.99
XRCC4-206ENST00000542685 PIDD1Q9HB75 910 aa8.84□□□□□ -0.99
XRCC4-206ENST00000542685 KRT82Q9NSB4 513 aa8.84□□□□□ -0.99
XRCC4-206ENST00000542685 ARNTP27540 789 aa8.83□□□□□ -1
XRCC4-206ENST00000542685 HNRNPUQ00839 825 aaKnown RBP eCLIP8.83□□□□□ -1
XRCC4-206ENST00000542685 MAP1SQ66K74 1059 aaPredicted RBP8.83□□□□□ -1
XRCC4-206ENST00000542685 SEZ6L2Q6UXD5 910 aa8.83□□□□□ -1
XRCC4-206ENST00000542685 TPTE2Q6XPS3 522 aa8.83□□□□□ -1
XRCC4-206ENST00000542685 FBF1Q8TES7 1133 aa8.83□□□□□ -1
XRCC4-206ENST00000542685 FANCD2OSQ96PS1 177 aa8.83□□□□□ -1
XRCC4-206ENST00000542685 TRAIPQ9BWF2 469 aa8.83□□□□□ -1
XRCC4-206ENST00000542685 OSBPL7Q9BZF2 842 aa8.83□□□□□ -1
XRCC4-206ENST00000542685 ATXN3LQ9H3M9 355 aa8.83□□□□□ -1
XRCC4-206ENST00000542685 LRRC4CQ9HCJ2 640 aa8.83□□□□□ -1
XRCC4-206ENST00000542685 C1GALT1Q9NS00 363 aa8.83□□□□□ -1
XRCC4-206ENST00000542685 GSTT1P30711 240 aa8.82□□□□□ -1
XRCC4-206ENST00000542685 IRAK1P51617 712 aa8.82□□□□□ -1
XRCC4-206ENST00000542685 ATP2B2Q01814 1243 aa8.82□□□□□ -1
XRCC4-206ENST00000542685 CYP27A1Q02318 531 aa8.82□□□□□ -1
XRCC4-206ENST00000542685 MSMPQ1L6U9 139 aa8.82□□□□□ -1
XRCC4-206ENST00000542685 ALG1LQ6GMV1 187 aa8.82□□□□□ -1
XRCC4-206ENST00000542685 CBX8Q9HC52 389 aa8.82□□□□□ -1
XRCC4-206ENST00000542685 DISC1Q9NRI5 854 aa8.82□□□□□ -1
XRCC4-206ENST00000542685 ANGEL1Q9UNK9 670 aaKnown RBP8.82□□□□□ -1
XRCC4-206ENST00000542685 PCDHGC5Q9Y5F6 944 aa8.82□□□□□ -1
XRCC4-206ENST00000542685 RNGTTO60942 597 aaKnown RBP8.81□□□□□ -1
XRCC4-206ENST00000542685 FBXO24O75426 580 aa8.81□□□□□ -1
XRCC4-206ENST00000542685 NME2P22392 152 aa8.81□□□□□ -1
XRCC4-206ENST00000542685 MCTP1Q6DN14 999 aa8.81□□□□□ -1
XRCC4-206ENST00000542685 DCAF1Q9Y4B6 1507 aa8.8□□□□□ -1
XRCC4-206ENST00000542685 HCLS1P14317 486 aaPredicted RBP8.8□□□□□ -1
XRCC4-206ENST00000542685 CDK5R2Q13319 367 aa8.8□□□□□ -1
XRCC4-206ENST00000542685 TTLL4Q14679 1199 aa8.8□□□□□ -1
XRCC4-206ENST00000542685 SMYD4Q8IYR2 804 aaPredicted RBP8.8□□□□□ -1
XRCC4-206ENST00000542685 NECAB3Q96P71 396 aaPredicted RBP8.8□□□□□ -1
XRCC4-206ENST00000542685 EMILIN2Q9BXX0 1053 aa8.8□□□□□ -1
XRCC4-206ENST00000542685 SRCIN1Q9C0H9 1055 aa8.8□□□□□ -1
XRCC4-206ENST00000542685 P4HBP07237 508 aaKnown RBP8.79□□□□□ -1
XRCC4-206ENST00000542685 OGFOD3Q6PK18 319 aa8.79□□□□□ -1
XRCC4-206ENST00000542685 MPRIPQ6WCQ1 1025 aa8.79□□□□□ -1
XRCC4-206ENST00000542685 GPBAR1Q8TDU6 330 aa8.79□□□□□ -1
XRCC4-206ENST00000542685 ACSBG1Q96GR2 724 aa8.79□□□□□ -1
XRCC4-206ENST00000542685 CCDC39Q9UFE4 941 aa8.79□□□□□ -1
XRCC4-206ENST00000542685 SPG7Q9UQ90 795 aa8.79□□□□□ -1
XRCC4-206ENST00000542685 PATL2C9JE40 543 aaKnown RBP8.78□□□□□ -1
XRCC4-206ENST00000542685 ENC1O14682 589 aa8.78□□□□□ -1
XRCC4-206ENST00000542685 PAGE1O75459 146 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms