RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 RAD18Q9NS91 495 aa7.52□□□□□ -1.21
MDM2-228ENST00000542502 FAM105AQ9NUU6 356 aa7.52□□□□□ -1.21
MDM2-228ENST00000542502 ARID1BQ8NFD5 2236 aaPredicted RBP7.51□□□□□ -1.21
MDM2-228ENST00000542502 KRTAP4-8A0A0G2JLE6 195 aa7.51□□□□□ -1.21
MDM2-228ENST00000542502 USPL1Q5W0Q7 1092 aa7.51□□□□□ -1.21
MDM2-228ENST00000542502 GSX1Q9H4S2 264 aaPredicted RBP7.51□□□□□ -1.21
MDM2-228ENST00000542502 BRPF3Q9ULD4 1205 aa7.51□□□□□ -1.21
MDM2-228ENST00000542502 ECEL1O95672 775 aa7.5□□□□□ -1.21
MDM2-228ENST00000542502 ITPKAP23677 461 aa7.5□□□□□ -1.21
MDM2-228ENST00000542502 ZNF765Q7L2R6 523 aa7.5□□□□□ -1.21
MDM2-228ENST00000542502 ZNF576Q9H609 170 aa7.5□□□□□ -1.21
MDM2-228ENST00000542502 AP4E1Q9UPM8 1137 aa7.5□□□□□ -1.21
MDM2-228ENST00000542502 ASPAP45381 313 aa7.49□□□□□ -1.21
MDM2-228ENST00000542502 ECM1Q16610 540 aa7.49□□□□□ -1.21
MDM2-228ENST00000542502 SEZ6L2Q6UXD5 910 aa7.49□□□□□ -1.21
MDM2-228ENST00000542502 AGBL5Q8NDL9 886 aa7.49□□□□□ -1.21
MDM2-228ENST00000542502 EHD4Q9H223 541 aa7.49□□□□□ -1.21
MDM2-228ENST00000542502 C1orf115Q9H7X2 142 aa7.49□□□□□ -1.21
MDM2-228ENST00000542502 LRRC4CQ9HCJ2 640 aa7.49□□□□□ -1.21
MDM2-228ENST00000542502 ZC3H7BQ9UGR2 993 aaKnown RBP7.49□□□□□ -1.21
MDM2-228ENST00000542502 SYNGAP1Q96PV0 1343 aa7.49□□□□□ -1.21
MDM2-228ENST00000542502 H3BRB1 525 aa7.48□□□□□ -1.21
MDM2-228ENST00000542502 AOC2O75106 756 aa7.48□□□□□ -1.21
MDM2-228ENST00000542502 PTPN12Q05209 780 aaKnown RBP7.48□□□□□ -1.21
MDM2-228ENST00000542502 COL19A1Q14993 1142 aa7.48□□□□□ -1.21
MDM2-228ENST00000542502 B4GALNT3Q6L9W6 998 aa7.48□□□□□ -1.21
MDM2-228ENST00000542502 GLYCTKQ8IVS8 523 aa7.48□□□□□ -1.21
MDM2-228ENST00000542502 FLCNQ8NFG4 579 aa7.48□□□□□ -1.21
MDM2-228ENST00000542502 TUT1Q9H6E5 874 aaKnown RBP7.48□□□□□ -1.21
MDM2-228ENST00000542502 PAK6Q9NQU5 681 aaPredicted RBP7.48□□□□□ -1.21
MDM2-228ENST00000542502 C1GALT1Q9NS00 363 aa7.48□□□□□ -1.21
MDM2-228ENST00000542502 NESP48681 1621 aa7.48□□□□□ -1.21
MDM2-228ENST00000542502 CEP164Q9UPV0 1460 aa7.48□□□□□ -1.21
MDM2-228ENST00000542502 ABCC8Q09428 1581 aa7.47□□□□□ -1.21
MDM2-228ENST00000542502 NDUFB5O43674 189 aa7.47□□□□□ -1.21
MDM2-228ENST00000542502 CPNE3O75131 537 aaKnown RBP7.47□□□□□ -1.21
MDM2-228ENST00000542502 ITGB5P18084 799 aa7.47□□□□□ -1.21
MDM2-228ENST00000542502 AP3B2Q13367 1082 aa7.47□□□□□ -1.21
MDM2-228ENST00000542502 PDE3BQ13370 1112 aa7.47□□□□□ -1.21
MDM2-228ENST00000542502 ASIC4Q96FT7 647 aa7.47□□□□□ -1.21
MDM2-228ENST00000542502 WDR18Q9BV38 432 aa7.47□□□□□ -1.21
MDM2-228ENST00000542502 NPHS2Q9NP85 383 aa7.47□□□□□ -1.21
MDM2-228ENST00000542502 USTQ9Y2C2 406 aa7.47□□□□□ -1.21
MDM2-228ENST00000542502 DAGLAQ9Y4D2 1042 aa7.47□□□□□ -1.21
MDM2-228ENST00000542502 FANCD2Q9BXW9 1451 aa7.47□□□□□ -1.21
MDM2-228ENST00000542502 DYNC1LI2O43237 492 aaPredicted RBP7.46□□□□□ -1.22
MDM2-228ENST00000542502 JUNBP17275 347 aaPredicted RBP7.46□□□□□ -1.22
MDM2-228ENST00000542502 ARHGAP4P98171 946 aa7.46□□□□□ -1.22
MDM2-228ENST00000542502 ORC1Q13415 861 aa7.46□□□□□ -1.22
MDM2-228ENST00000542502 PDE3AQ14432 1141 aa7.46□□□□□ -1.22
MDM2-228ENST00000542502 OGFOD3Q6PK18 319 aa7.46□□□□□ -1.22
MDM2-228ENST00000542502 FAM129BQ96TA1 746 aa7.46□□□□□ -1.22
MDM2-228ENST00000542502 SERPINB4P48594 390 aa7.45□□□□□ -1.22
MDM2-228ENST00000542502 OGFOD2Q6N063 350 aa7.45□□□□□ -1.22
MDM2-228ENST00000542502 CITED4Q96RK1 184 aa7.45□□□□□ -1.22
MDM2-228ENST00000542502 ABCB6Q9NP58 842 aa7.45□□□□□ -1.22
MDM2-228ENST00000542502 PPP1R9AQ9ULJ8 1098 aa7.45□□□□□ -1.22
MDM2-228ENST00000542502 FZD5Q13467 585 aa7.44□□□□□ -1.22
MDM2-228ENST00000542502 RPS26P11Q5JNZ5 115 aaPredicted RBP7.44□□□□□ -1.22
MDM2-228ENST00000542502 PRPF40BQ6NWY9 871 aaKnown RBP7.44□□□□□ -1.22
MDM2-228ENST00000542502 SLC5A6Q9Y289 635 aa7.44□□□□□ -1.22
MDM2-228ENST00000542502 KIF21AQ7Z4S6 1674 aa7.44□□□□□ -1.22
MDM2-228ENST00000542502 CUX2O14529 1486 aa7.43□□□□□ -1.22
MDM2-228ENST00000542502 MRC2Q9UBG0 1479 aa7.43□□□□□ -1.22
MDM2-228ENST00000542502 CYP27C1Q4G0S4 372 aa7.43□□□□□ -1.22
MDM2-228ENST00000542502 BCL7CQ8WUZ0 217 aaPredicted RBP7.43□□□□□ -1.22
MDM2-228ENST00000542502 CCDC74AQ96AQ1 378 aa7.43□□□□□ -1.22
MDM2-228ENST00000542502 DNAJC25Q9H1X3 360 aa7.43□□□□□ -1.22
MDM2-228ENST00000542502 LGR6Q9HBX8 967 aa7.43□□□□□ -1.22
MDM2-228ENST00000542502 TMEM238LA0A1B0GVL6 79 aa7.42□□□□□ -1.22
MDM2-228ENST00000542502 EIF1AYO14602 144 aaKnown RBP7.42□□□□□ -1.22
MDM2-228ENST00000542502 TMPRSS2O15393 492 aa7.42□□□□□ -1.22
MDM2-228ENST00000542502 STK11IPQ8N1F8 1099 aa7.42□□□□□ -1.22
MDM2-228ENST00000542502 POU5F2Q8N7G0 328 aa7.42□□□□□ -1.22
MDM2-228ENST00000542502 CRIM1Q9NZV1 1036 aa7.42□□□□□ -1.22
MDM2-228ENST00000542502 GADD45BO75293 160 aaPredicted RBP7.41□□□□□ -1.22
MDM2-228ENST00000542502 IGHA2P01877 340 aa7.41□□□□□ -1.22
MDM2-228ENST00000542502 SLFN14P0C7P3 912 aa7.41□□□□□ -1.22
MDM2-228ENST00000542502 LIG1P18858 919 aa7.41□□□□□ -1.22
MDM2-228ENST00000542502 WDR89Q96FK6 387 aaPredicted RBP7.41□□□□□ -1.22
MDM2-228ENST00000542502 ATXN3LQ9H3M9 355 aa7.41□□□□□ -1.22
MDM2-228ENST00000542502 CCDC86Q9H6F5 360 aaKnown RBP7.41□□□□□ -1.22
MDM2-228ENST00000542502 TRAK1Q9UPV9 953 aa7.41□□□□□ -1.22
MDM2-228ENST00000542502 GPR182O15218 404 aa7.4□□□□□ -1.22
MDM2-228ENST00000542502 FAAP100Q0VG06 881 aa7.4□□□□□ -1.22
MDM2-228ENST00000542502 SPRED2Q7Z698 418 aa7.4□□□□□ -1.22
MDM2-228ENST00000542502 WFDC3Q8IUB2 231 aa7.4□□□□□ -1.22
MDM2-228ENST00000542502 MISP3Q96FF7 219 aa7.4□□□□□ -1.22
MDM2-228ENST00000542502 FANCD2OSQ96PS1 177 aa7.4□□□□□ -1.22
MDM2-228ENST00000542502 NIF3L1Q9GZT8 377 aa7.4□□□□□ -1.22
MDM2-228ENST00000542502 PIDD1Q9HB75 910 aa7.4□□□□□ -1.22
MDM2-228ENST00000542502 WDR62O43379 1518 aa7.4□□□□□ -1.22
MDM2-228ENST00000542502 THOC2Q8NI27 1593 aaKnown RBP7.39□□□□□ -1.23
MDM2-228ENST00000542502 ZNF862O60290 1169 aa7.39□□□□□ -1.23
MDM2-228ENST00000542502 ZNF157P51786 506 aaPredicted RBP7.39□□□□□ -1.23
MDM2-228ENST00000542502 ID3Q02535 119 aa7.39□□□□□ -1.23
MDM2-228ENST00000542502 CDK5R2Q13319 367 aa7.39□□□□□ -1.23
MDM2-228ENST00000542502 GRM2Q14416 872 aa7.39□□□□□ -1.23
MDM2-228ENST00000542502 PLCL1Q15111 1095 aa7.39□□□□□ -1.23
MDM2-228ENST00000542502 KIF4BQ2VIQ3 1234 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms