RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 CDPF1Q6NVV7 123 aa6.85□□□□□ -1.31
SNHG1-217ENST00000541578 PAOXQ6QHF9 649 aa6.85□□□□□ -1.31
SNHG1-217ENST00000541578 FRMD6Q96NE9 622 aa6.85□□□□□ -1.31
SNHG1-217ENST00000541578 CEP44Q9C0F1 390 aa6.85□□□□□ -1.31
SNHG1-217ENST00000541578 CCDC86Q9H6F5 360 aaKnown RBP6.85□□□□□ -1.31
SNHG1-217ENST00000541578 ZFP64Q9NPA5 681 aa6.85□□□□□ -1.31
SNHG1-217ENST00000541578 PPM1HQ9ULR3 514 aa6.85□□□□□ -1.31
SNHG1-217ENST00000541578 E9PSI1 815 aa6.84□□□□□ -1.31
SNHG1-217ENST00000541578 HYAL3O43820 417 aaPredicted RBP6.84□□□□□ -1.31
SNHG1-217ENST00000541578 LIG1P18858 919 aa6.84□□□□□ -1.31
SNHG1-217ENST00000541578 ARNTP27540 789 aa6.84□□□□□ -1.31
SNHG1-217ENST00000541578 FGD1P98174 961 aa6.84□□□□□ -1.31
SNHG1-217ENST00000541578 NFKBIBQ15653 356 aa6.84□□□□□ -1.31
SNHG1-217ENST00000541578 XP32Q5T750 250 aa6.84□□□□□ -1.31
SNHG1-217ENST00000541578 ZDHHC13Q8IUH4 622 aa6.84□□□□□ -1.31
SNHG1-217ENST00000541578 WDR18Q9BV38 432 aa6.84□□□□□ -1.31
SNHG1-217ENST00000541578 KRT82Q9NSB4 513 aa6.84□□□□□ -1.31
SNHG1-217ENST00000541578 AP4E1Q9UPM8 1137 aa6.84□□□□□ -1.31
SNHG1-217ENST00000541578 ACTL7BQ9Y614 415 aa6.84□□□□□ -1.31
SNHG1-217ENST00000541578 PRPF40AO75400 957 aaKnown RBP6.83□□□□□ -1.32
SNHG1-217ENST00000541578 NME2P22392 152 aa6.83□□□□□ -1.32
SNHG1-217ENST00000541578 ASPAP45381 313 aa6.83□□□□□ -1.32
SNHG1-217ENST00000541578 SULF2Q8IWU5 870 aa6.83□□□□□ -1.32
SNHG1-217ENST00000541578 GIMAP7Q8NHV1 300 aa6.83□□□□□ -1.32
SNHG1-217ENST00000541578 EZH1Q92800 747 aaPredicted RBP6.83□□□□□ -1.32
SNHG1-217ENST00000541578 KCNB2Q92953 911 aa6.83□□□□□ -1.32
SNHG1-217ENST00000541578 MFSD14AQ96MC6 490 aa6.83□□□□□ -1.32
SNHG1-217ENST00000541578 EMILIN2Q9BXX0 1053 aa6.83□□□□□ -1.32
SNHG1-217ENST00000541578 C12orf49Q9H741 205 aa6.83□□□□□ -1.32
SNHG1-217ENST00000541578 FAM8A1Q9UBU6 413 aa6.83□□□□□ -1.32
SNHG1-217ENST00000541578 PPP1R9AQ9ULJ8 1098 aa6.83□□□□□ -1.32
SNHG1-217ENST00000541578 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.82□□□□□ -1.32
SNHG1-217ENST00000541578 WDR64B1ANS9 1081 aa6.82□□□□□ -1.32
SNHG1-217ENST00000541578 ZNF862O60290 1169 aa6.82□□□□□ -1.32
SNHG1-217ENST00000541578 NFICP08651 508 aa6.82□□□□□ -1.32
SNHG1-217ENST00000541578 RAB6AP20340 208 aa6.82□□□□□ -1.32
SNHG1-217ENST00000541578 SSTR4P31391 388 aa6.82□□□□□ -1.32
SNHG1-217ENST00000541578 MAP7Q14244 749 aa6.82□□□□□ -1.32
SNHG1-217ENST00000541578 EAPPQ56P03 285 aaPredicted RBP6.82□□□□□ -1.32
SNHG1-217ENST00000541578 TPTE2Q6XPS3 522 aa6.82□□□□□ -1.32
SNHG1-217ENST00000541578 PDZD3Q86UT5 571 aa6.82□□□□□ -1.32
SNHG1-217ENST00000541578 FBXL6Q8N531 539 aa6.82□□□□□ -1.32
SNHG1-217ENST00000541578 SHKBP1Q8TBC3 707 aa6.82□□□□□ -1.32
SNHG1-217ENST00000541578 STK35Q8TDR2 534 aa6.82□□□□□ -1.32
SNHG1-217ENST00000541578 WDR89Q96FK6 387 aaPredicted RBP6.82□□□□□ -1.32
SNHG1-217ENST00000541578 NECAB3Q96P71 396 aaPredicted RBP6.82□□□□□ -1.32
SNHG1-217ENST00000541578 ATG3Q9NT62 314 aa6.82□□□□□ -1.32
SNHG1-217ENST00000541578 FAM105AQ9NUU6 356 aa6.82□□□□□ -1.32
SNHG1-217ENST00000541578 SAMM50Q9Y512 469 aa6.82□□□□□ -1.32
SNHG1-217ENST00000541578 COBLO75128 1261 aa6.81□□□□□ -1.32
SNHG1-217ENST00000541578 TGFB1P01137 390 aa6.81□□□□□ -1.32
SNHG1-217ENST00000541578 GNA15P30679 374 aa6.81□□□□□ -1.32
SNHG1-217ENST00000541578 KIF4BQ2VIQ3 1234 aa6.81□□□□□ -1.32
SNHG1-217ENST00000541578 ANKRD24Q8TF21 1146 aa6.81□□□□□ -1.32
SNHG1-217ENST00000541578 GSX1Q9H4S2 264 aaPredicted RBP6.81□□□□□ -1.32
SNHG1-217ENST00000541578 CBX8Q9HC52 389 aa6.81□□□□□ -1.32
SNHG1-217ENST00000541578 PCMTD2Q9NV79 361 aa6.81□□□□□ -1.32
SNHG1-217ENST00000541578 FBXO24O75426 580 aa6.8□□□□□ -1.32
SNHG1-217ENST00000541578 USP17L7P0C7H9 530 aa6.8□□□□□ -1.32
SNHG1-217ENST00000541578 EIF4BP23588 611 aaKnown RBP6.8□□□□□ -1.32
SNHG1-217ENST00000541578 GRIK1P39086 918 aa6.8□□□□□ -1.32
SNHG1-217ENST00000541578 ID3Q02535 119 aa6.8□□□□□ -1.32
SNHG1-217ENST00000541578 INTS5Q6P9B9 1019 aaKnown RBP6.8□□□□□ -1.32
SNHG1-217ENST00000541578 NBPF11Q86T75 865 aa6.8□□□□□ -1.32
SNHG1-217ENST00000541578 DUSP9Q99956 384 aaKnown RBP6.8□□□□□ -1.32
SNHG1-217ENST00000541578 ATXN3LQ9H3M9 355 aa6.8□□□□□ -1.32
SNHG1-217ENST00000541578 ACSS3Q9H6R3 686 aa6.8□□□□□ -1.32
SNHG1-217ENST00000541578 CRIM1Q9NZV1 1036 aa6.8□□□□□ -1.32
SNHG1-217ENST00000541578 PRR19A6NJB7 356 aa6.79□□□□□ -1.32
SNHG1-217ENST00000541578 ENC1O14682 589 aa6.79□□□□□ -1.32
SNHG1-217ENST00000541578 TMPRSS2O15393 492 aa6.79□□□□□ -1.32
SNHG1-217ENST00000541578 CD97P48960 835 aa6.79□□□□□ -1.32
SNHG1-217ENST00000541578 MAP1SQ66K74 1059 aaPredicted RBP6.79□□□□□ -1.32
SNHG1-217ENST00000541578 DNAJC14Q6Y2X3 702 aaPredicted RBP6.79□□□□□ -1.32
SNHG1-217ENST00000541578 TBC1D32Q96NH3 1257 aa6.79□□□□□ -1.32
SNHG1-217ENST00000541578 SEMA6CQ9H3T2 930 aa6.79□□□□□ -1.32
SNHG1-217ENST00000541578 PIDD1Q9HB75 910 aa6.79□□□□□ -1.32
SNHG1-217ENST00000541578 PRKAG2Q9UGJ0 569 aa6.79□□□□□ -1.32
SNHG1-217ENST00000541578 AK5Q9Y6K8 562 aa6.79□□□□□ -1.32
SNHG1-217ENST00000541578 F13BP05160 661 aa6.78□□□□□ -1.32
SNHG1-217ENST00000541578 BMP6P22004 513 aa6.78□□□□□ -1.32
SNHG1-217ENST00000541578 ZNF252P-AS1Q0IIN9 211 aa6.78□□□□□ -1.32
SNHG1-217ENST00000541578 LRRC14Q15048 493 aa6.78□□□□□ -1.32
SNHG1-217ENST00000541578 ZAR1Q86SH2 424 aa6.78□□□□□ -1.32
SNHG1-217ENST00000541578 NPAS4Q8IUM7 802 aa6.78□□□□□ -1.32
SNHG1-217ENST00000541578 ACSBG1Q96GR2 724 aa6.78□□□□□ -1.32
SNHG1-217ENST00000541578 FANCD2OSQ96PS1 177 aa6.78□□□□□ -1.32
SNHG1-217ENST00000541578 OSBPL1AQ9BXW6 950 aa6.78□□□□□ -1.32
SNHG1-217ENST00000541578 DISC1Q9NRI5 854 aa6.78□□□□□ -1.32
SNHG1-217ENST00000541578 PIM2Q9P1W9 311 aa6.78□□□□□ -1.32
SNHG1-217ENST00000541578 LEMD3Q9Y2U8 911 aa6.78□□□□□ -1.32
SNHG1-217ENST00000541578 DAGLAQ9Y4D2 1042 aa6.78□□□□□ -1.32
SNHG1-217ENST00000541578 PAGE1O75459 146 aa6.77□□□□□ -1.33
SNHG1-217ENST00000541578 MED26O95402 600 aa6.77□□□□□ -1.33
SNHG1-217ENST00000541578 ADMP35318 185 aa6.77□□□□□ -1.33
SNHG1-217ENST00000541578 SV2BQ7L1I2 683 aa6.77□□□□□ -1.33
SNHG1-217ENST00000541578 GRIN3AQ8TCU5 1115 aa6.77□□□□□ -1.33
SNHG1-217ENST00000541578 GPBAR1Q8TDU6 330 aa6.77□□□□□ -1.33
SNHG1-217ENST00000541578 METTL22Q9BUU2 404 aaPredicted RBP6.77□□□□□ -1.33
SNHG1-217ENST00000541578 TTF2Q9UNY4 1162 aaKnown RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms