RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 CLEC4GQ6UXB4 293 aa11.54□□□□□ -0.56
TRAF1-202ENST00000540010 CCDC144CPQ8IYA2 1237 aa11.54□□□□□ -0.56
TRAF1-202ENST00000540010 FAM200AQ8TCP9 573 aa11.54□□□□□ -0.56
TRAF1-202ENST00000540010 OSBP2Q969R2 916 aa11.54□□□□□ -0.56
TRAF1-202ENST00000540010 SRP68Q9UHB9 627 aaKnown RBP11.54□□□□□ -0.56
TRAF1-202ENST00000540010 ERCC4Q92889 916 aaPredicted RBP11.54□□□□□ -0.56
TRAF1-202ENST00000540010 NLRP3Q96P20 1036 aa11.54□□□□□ -0.56
TRAF1-202ENST00000540010 ABCF2Q9UG63 623 aa11.54□□□□□ -0.56
TRAF1-202ENST00000540010 DOT1LQ8TEK3 1739 aa11.54□□□□□ -0.56
TRAF1-202ENST00000540010 SLC3A2P08195 630 aaKnown RBP11.53□□□□□ -0.56
TRAF1-202ENST00000540010 TOP1P11387 765 aaKnown RBP11.53□□□□□ -0.56
TRAF1-202ENST00000540010 NYXQ9GZU5 481 aa11.53□□□□□ -0.56
TRAF1-202ENST00000540010 ZDHHC9Q9Y397 364 aa11.53□□□□□ -0.56
TRAF1-202ENST00000540010 ZNF213O14771 459 aa11.53□□□□□ -0.56
TRAF1-202ENST00000540010 PTGS1P23219 599 aa11.53□□□□□ -0.56
TRAF1-202ENST00000540010 CHST3Q7LGC8 479 aa11.53□□□□□ -0.56
TRAF1-202ENST00000540010 TRIM34Q9BYJ4 488 aa11.53□□□□□ -0.56
TRAF1-202ENST00000540010 TRPC5Q9UL62 973 aaPredicted RBP11.53□□□□□ -0.56
TRAF1-202ENST00000540010 GPAA1O43292 621 aa11.53□□□□□ -0.56
TRAF1-202ENST00000540010 NTSR2O95665 410 aa11.53□□□□□ -0.56
TRAF1-202ENST00000540010 CYP2E1P05181 493 aaPredicted RBP11.53□□□□□ -0.56
TRAF1-202ENST00000540010 SKILP12757 684 aa11.53□□□□□ -0.56
TRAF1-202ENST00000540010 TXLNAP40222 546 aa11.53□□□□□ -0.56
TRAF1-202ENST00000540010 TPTE2Q6XPS3 522 aa11.53□□□□□ -0.56
TRAF1-202ENST00000540010 LUZP1Q86V48 1076 aa11.53□□□□□ -0.56
TRAF1-202ENST00000540010 IL17RAQ96F46 866 aa11.53□□□□□ -0.56
TRAF1-202ENST00000540010 NACAP1Q9BZK3 213 aa11.53□□□□□ -0.56
TRAF1-202ENST00000540010 MAGEC2Q9UBF1 373 aaPredicted RBP11.53□□□□□ -0.56
TRAF1-202ENST00000540010 LRP6O75581 1613 aa11.53□□□□□ -0.56
TRAF1-202ENST00000540010 CEP135Q66GS9 1140 aa11.52□□□□□ -0.56
TRAF1-202ENST00000540010 SEPT12Q8IYM1 358 aa11.52□□□□□ -0.56
TRAF1-202ENST00000540010 TSC1Q92574 1164 aa11.52□□□□□ -0.56
TRAF1-202ENST00000540010 PODXL2Q9NZ53 605 aa11.52□□□□□ -0.56
TRAF1-202ENST00000540010 GOLGA8BA8MQT2 603 aa11.52□□□□□ -0.57
TRAF1-202ENST00000540010 CHRNDQ07001 517 aa11.52□□□□□ -0.57
TRAF1-202ENST00000540010 DHX32Q7L7V1 743 aaKnown RBP11.52□□□□□ -0.57
TRAF1-202ENST00000540010 SPATA5Q8NB90 893 aa11.52□□□□□ -0.57
TRAF1-202ENST00000540010 KCNB2Q92953 911 aa11.52□□□□□ -0.57
TRAF1-202ENST00000540010 UBAC1Q9BSL1 405 aa11.52□□□□□ -0.57
TRAF1-202ENST00000540010 TMEM63CQ9P1W3 806 aa11.52□□□□□ -0.57
TRAF1-202ENST00000540010 CDKL5O76039 1030 aa11.52□□□□□ -0.57
TRAF1-202ENST00000540010 CAVIN4Q5BKX8 364 aa11.52□□□□□ -0.57
TRAF1-202ENST00000540010 TRAPPC3LQ5T215 181 aa11.52□□□□□ -0.57
TRAF1-202ENST00000540010 LMBRD1Q9NUN5 540 aa11.52□□□□□ -0.57
TRAF1-202ENST00000540010 NOL7Q9UMY1 257 aaKnown RBP11.52□□□□□ -0.57
TRAF1-202ENST00000540010 RPS6KA4O75676 772 aa11.51□□□□□ -0.57
TRAF1-202ENST00000540010 TBC1D9BQ66K14 1250 aa11.51□□□□□ -0.57
TRAF1-202ENST00000540010 ZNHIT6Q9NWK9 470 aaKnown RBP11.51□□□□□ -0.57
TRAF1-202ENST00000540010 RAI14Q9P0K7 980 aa11.51□□□□□ -0.57
TRAF1-202ENST00000540010 ORC3Q9UBD5 711 aaPredicted RBP11.51□□□□□ -0.57
TRAF1-202ENST00000540010 DACH1Q9UI36 760 aa11.51□□□□□ -0.57
TRAF1-202ENST00000540010 NUP188Q5SRE5 1749 aa11.51□□□□□ -0.57
TRAF1-202ENST00000540010 BCL9LQ86UU0 1499 aa11.51□□□□□ -0.57
TRAF1-202ENST00000540010 EPS15P42566 896 aa11.51□□□□□ -0.57
TRAF1-202ENST00000540010 BCAMP50895 628 aa11.51□□□□□ -0.57
TRAF1-202ENST00000540010 MAGEB6Q8N7X4 407 aa11.51□□□□□ -0.57
TRAF1-202ENST00000540010 PUS7LQ9H0K6 701 aaKnown RBP11.51□□□□□ -0.57
TRAF1-202ENST00000540010 QTRT2Q9H974 415 aaKnown RBP11.51□□□□□ -0.57
TRAF1-202ENST00000540010 ZNF532Q9HCE3 1301 aa11.51□□□□□ -0.57
TRAF1-202ENST00000540010 MINDY4BA8MYZ0 360 aa11.51□□□□□ -0.57
TRAF1-202ENST00000540010 E7EWF7 191 aa11.51□□□□□ -0.57
TRAF1-202ENST00000540010 KIF2AO00139 706 aaPredicted RBP11.51□□□□□ -0.57
TRAF1-202ENST00000540010 CTAGE5O15320 804 aa11.51□□□□□ -0.57
TRAF1-202ENST00000540010 GADD45BO75293 160 aaPredicted RBP11.51□□□□□ -0.57
TRAF1-202ENST00000540010 GTF2F1P35269 517 aaKnown RBP eCLIP11.51□□□□□ -0.57
TRAF1-202ENST00000540010 TYRO3Q06418 890 aa11.51□□□□□ -0.57
TRAF1-202ENST00000540010 SNW1Q13573 536 aaKnown RBP11.51□□□□□ -0.57
TRAF1-202ENST00000540010 KIF4BQ2VIQ3 1234 aa11.51□□□□□ -0.57
TRAF1-202ENST00000540010 TSPYL1Q9H0U9 437 aa11.51□□□□□ -0.57
TRAF1-202ENST00000540010 ERLIN1O75477 346 aa11.51□□□□□ -0.57
TRAF1-202ENST00000540010 STX1AQ16623 288 aa11.51□□□□□ -0.57
TRAF1-202ENST00000540010 CNNM3Q8NE01 707 aa11.51□□□□□ -0.57
TRAF1-202ENST00000540010 APOBRQ0VD83 1088 aa11.5□□□□□ -0.57
TRAF1-202ENST00000540010 HS1BP3Q53T59 392 aa11.5□□□□□ -0.57
TRAF1-202ENST00000540010 MICU3Q86XE3 530 aa11.5□□□□□ -0.57
TRAF1-202ENST00000540010 TICAM2Q86XR7 235 aa11.5□□□□□ -0.57
TRAF1-202ENST00000540010 DEF6Q9H4E7 631 aa11.5□□□□□ -0.57
TRAF1-202ENST00000540010 PIH1D3Q9NQM4 214 aaKnown RBP11.5□□□□□ -0.57
TRAF1-202ENST00000540010 NARFQ9UHQ1 456 aa11.5□□□□□ -0.57
TRAF1-202ENST00000540010 RPAP1Q9BWH6 1393 aaPredicted RBP11.5□□□□□ -0.57
TRAF1-202ENST00000540010 CLEC17AQ6ZS10 378 aa11.5□□□□□ -0.57
TRAF1-202ENST00000540010 CENPHQ9H3R5 247 aa11.5□□□□□ -0.57
TRAF1-202ENST00000540010 PDE6AP16499 860 aa11.5□□□□□ -0.57
TRAF1-202ENST00000540010 TSGA10IPQ3SY00 556 aa11.5□□□□□ -0.57
TRAF1-202ENST00000540010 DHX37Q8IY37 1157 aaKnown RBP11.5□□□□□ -0.57
TRAF1-202ENST00000540010 NAPBQ9H115 298 aa11.5□□□□□ -0.57
TRAF1-202ENST00000540010 RIC1Q4ADV7 1423 aa11.49□□□□□ -0.57
TRAF1-202ENST00000540010 CNTNAP4Q9C0A0 1308 aa11.49□□□□□ -0.57
TRAF1-202ENST00000540010 FGAP02671 866 aa11.49□□□□□ -0.57
TRAF1-202ENST00000540010 DHX8Q14562 1220 aaKnown RBP11.49□□□□□ -0.57
TRAF1-202ENST00000540010 FAM196AQ6ZSG2 479 aa11.49□□□□□ -0.57
TRAF1-202ENST00000540010 FSD2A1L4K1 749 aa11.49□□□□□ -0.57
TRAF1-202ENST00000540010 TOB2Q14106 344 aaPredicted RBP11.49□□□□□ -0.57
TRAF1-202ENST00000540010 NCOA7Q8NI08 942 aa11.49□□□□□ -0.57
TRAF1-202ENST00000540010 ZHX3Q9H4I2 956 aa11.49□□□□□ -0.57
TRAF1-202ENST00000540010 ADD2P35612 726 aa11.49□□□□□ -0.57
TRAF1-202ENST00000540010 RASGRF1Q13972 1273 aa11.49□□□□□ -0.57
TRAF1-202ENST00000540010 WWC3Q9ULE0 1092 aa11.49□□□□□ -0.57
TRAF1-202ENST00000540010 ZSCAN12O43309 604 aa11.49□□□□□ -0.57
TRAF1-202ENST00000540010 LMOD1P29536 600 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms