RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 HOOK2Q96ED9 719 aa7.29□□□□□ -1.24
LSAMP-207ENST00000539563 FAM212AQ96EL1 285 aa7.29□□□□□ -1.24
LSAMP-207ENST00000539563 CLEC11AQ9Y240 323 aa7.29□□□□□ -1.24
LSAMP-207ENST00000539563 A0A1B0GUL7 405 aa7.29□□□□□ -1.24
LSAMP-207ENST00000539563 SBNO2Q9Y2G9 1366 aa7.29□□□□□ -1.24
LSAMP-207ENST00000539563 PRIM1P49642 420 aaKnown RBP7.29□□□□□ -1.24
LSAMP-207ENST00000539563 CDAN1Q8IWY9 1227 aa7.29□□□□□ -1.24
LSAMP-207ENST00000539563 IFNKQ9P0W0 207 aa7.29□□□□□ -1.24
LSAMP-207ENST00000539563 MYL5Q02045 173 aa7.29□□□□□ -1.24
LSAMP-207ENST00000539563 HAUS3Q68CZ6 603 aa7.29□□□□□ -1.24
LSAMP-207ENST00000539563 HIBADHP31937 336 aaKnown RBP7.29□□□□□ -1.24
LSAMP-207ENST00000539563 TNNC1P63316 161 aa7.29□□□□□ -1.24
LSAMP-207ENST00000539563 ARID5AQ03989 594 aa7.29□□□□□ -1.24
LSAMP-207ENST00000539563 CCDC50Q8IVM0 306 aa7.29□□□□□ -1.24
LSAMP-207ENST00000539563 PICK1Q9NRD5 415 aa7.29□□□□□ -1.24
LSAMP-207ENST00000539563 ZRANB1Q9UGI0 708 aa7.29□□□□□ -1.24
LSAMP-207ENST00000539563 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.29□□□□□ -1.24
LSAMP-207ENST00000539563 ADGRL2O95490 1459 aa7.29□□□□□ -1.24
LSAMP-207ENST00000539563 ATP5DP30049 168 aa7.29□□□□□ -1.24
LSAMP-207ENST00000539563 VAV2P52735 878 aa7.29□□□□□ -1.24
LSAMP-207ENST00000539563 TNNI3KQ59H18 835 aa7.29□□□□□ -1.24
LSAMP-207ENST00000539563 WDR44Q5JSH3 913 aa7.29□□□□□ -1.24
LSAMP-207ENST00000539563 RGS22Q8NE09 1264 aa7.29□□□□□ -1.24
LSAMP-207ENST00000539563 FBF1Q8TES7 1133 aa7.29□□□□□ -1.24
LSAMP-207ENST00000539563 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.29□□□□□ -1.24
LSAMP-207ENST00000539563 FPGT-TNNI3KV9GXZ4 949 aa7.29□□□□□ -1.24
LSAMP-207ENST00000539563 V9GYY5 206 aaPredicted RBP7.29□□□□□ -1.24
LSAMP-207ENST00000539563 MAP3K19Q56UN5 1328 aa7.28□□□□□ -1.24
LSAMP-207ENST00000539563 SLC27A2O14975 620 aa7.28□□□□□ -1.24
LSAMP-207ENST00000539563 RIMBP2O15034 1052 aa7.28□□□□□ -1.24
LSAMP-207ENST00000539563 MBD4O95243 580 aa7.28□□□□□ -1.24
LSAMP-207ENST00000539563 CLCN1P35523 988 aa7.28□□□□□ -1.24
LSAMP-207ENST00000539563 SMTNP53814 917 aa7.28□□□□□ -1.24
LSAMP-207ENST00000539563 TSPYL6Q8N831 410 aa7.28□□□□□ -1.24
LSAMP-207ENST00000539563 ARHGEF10O15013 1369 aa7.28□□□□□ -1.24
LSAMP-207ENST00000539563 SNX16P57768 344 aa7.28□□□□□ -1.24
LSAMP-207ENST00000539563 MCM6Q14566 821 aa7.28□□□□□ -1.24
LSAMP-207ENST00000539563 CFAP58Q5T655 872 aa7.28□□□□□ -1.24
LSAMP-207ENST00000539563 RBM26Q5T8P6 1007 aaKnown RBP7.28□□□□□ -1.24
LSAMP-207ENST00000539563 TMOD4Q9NZQ9 345 aa7.28□□□□□ -1.24
LSAMP-207ENST00000539563 ANGEL1Q9UNK9 670 aaKnown RBP7.28□□□□□ -1.24
LSAMP-207ENST00000539563 EYA2O00167 538 aa7.28□□□□□ -1.24
LSAMP-207ENST00000539563 ITGA6P23229 1130 aa7.28□□□□□ -1.24
LSAMP-207ENST00000539563 HSP90AA4PQ58FG1 418 aa7.28□□□□□ -1.24
LSAMP-207ENST00000539563 ARFGAP2Q8N6H7 521 aa7.28□□□□□ -1.24
LSAMP-207ENST00000539563 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.28□□□□□ -1.24
LSAMP-207ENST00000539563 TESK2Q96S53 571 aa7.28□□□□□ -1.24
LSAMP-207ENST00000539563 CARD14Q9BXL6 1004 aa7.28□□□□□ -1.24
LSAMP-207ENST00000539563 MROH5Q6ZUA9 1318 aa7.28□□□□□ -1.24
LSAMP-207ENST00000539563 CUTAO60888 179 aa7.28□□□□□ -1.24
LSAMP-207ENST00000539563 ZNF569Q5MCW4 686 aa7.28□□□□□ -1.24
LSAMP-207ENST00000539563 RAB3IL1Q8TBN0 382 aa7.28□□□□□ -1.24
LSAMP-207ENST00000539563 FNBP1Q96RU3 617 aa7.28□□□□□ -1.24
LSAMP-207ENST00000539563 CCNT1O60563 726 aaKnown RBP7.28□□□□□ -1.24
LSAMP-207ENST00000539563 TICAM2Q86XR7 235 aa7.28□□□□□ -1.24
LSAMP-207ENST00000539563 ZNF830Q96NB3 372 aaPredicted RBP7.28□□□□□ -1.24
LSAMP-207ENST00000539563 SEL1L2Q5TEA6 688 aa7.28□□□□□ -1.24
LSAMP-207ENST00000539563 CABLES1Q8TDN4 633 aa7.28□□□□□ -1.24
LSAMP-207ENST00000539563 TIGD1Q96MW7 591 aa7.28□□□□□ -1.24
LSAMP-207ENST00000539563 BAG1Q99933 345 aaPredicted RBP7.28□□□□□ -1.24
LSAMP-207ENST00000539563 PRDM10Q9NQV6 1147 aa7.28□□□□□ -1.24
LSAMP-207ENST00000539563 IBTKQ9P2D0 1353 aaPredicted RBP7.28□□□□□ -1.24
LSAMP-207ENST00000539563 NCKAP5LQ9HCH0 1330 aa7.28□□□□□ -1.24
LSAMP-207ENST00000539563 VWA3AA6NCI4 1184 aa7.28□□□□□ -1.24
LSAMP-207ENST00000539563 OTUD6BQ8N6M0 293 aa7.28□□□□□ -1.24
LSAMP-207ENST00000539563 SUPT20HQ8NEM7 779 aa7.28□□□□□ -1.24
LSAMP-207ENST00000539563 HELBQ8NG08 1087 aaPredicted RBP7.28□□□□□ -1.24
LSAMP-207ENST00000539563 IFT74Q96LB3 600 aa7.28□□□□□ -1.24
LSAMP-207ENST00000539563 IMPACTQ9P2X3 320 aa7.28□□□□□ -1.24
LSAMP-207ENST00000539563 EXOC7Q9UPT5 735 aa7.28□□□□□ -1.24
LSAMP-207ENST00000539563 ATP6V0A2Q9Y487 856 aa7.28□□□□□ -1.24
LSAMP-207ENST00000539563 INSRP06213 1382 aa7.27□□□□□ -1.24
LSAMP-207ENST00000539563 CA8P35219 290 aa7.27□□□□□ -1.24
LSAMP-207ENST00000539563 MXRA7P84157 204 aa7.27□□□□□ -1.24
LSAMP-207ENST00000539563 ZBTB16Q05516 673 aa7.27□□□□□ -1.24
LSAMP-207ENST00000539563 DCAF17Q5H9S7 520 aaPredicted RBP7.27□□□□□ -1.24
LSAMP-207ENST00000539563 PPP1R7Q15435 360 aa7.27□□□□□ -1.25
LSAMP-207ENST00000539563 CCDC63Q8NA47 563 aa7.27□□□□□ -1.25
LSAMP-207ENST00000539563 CNBD1Q8NA66 436 aa7.27□□□□□ -1.25
LSAMP-207ENST00000539563 PSMD1Q99460 953 aa7.27□□□□□ -1.25
LSAMP-207ENST00000539563 GGA1Q9UJY5 639 aa7.27□□□□□ -1.25
LSAMP-207ENST00000539563 BACH1O14867 736 aa7.27□□□□□ -1.25
LSAMP-207ENST00000539563 CLUL1Q15846 466 aa7.27□□□□□ -1.25
LSAMP-207ENST00000539563 LPIN2Q92539 896 aa7.27□□□□□ -1.25
LSAMP-207ENST00000539563 BTG4Q9NY30 223 aa7.27□□□□□ -1.25
LSAMP-207ENST00000539563 PZPP20742 1482 aa7.27□□□□□ -1.25
LSAMP-207ENST00000539563 NDC80O14777 642 aa7.27□□□□□ -1.25
LSAMP-207ENST00000539563 CCT6AP40227 531 aaKnown RBP7.27□□□□□ -1.25
LSAMP-207ENST00000539563 SLC8A3P57103 927 aa7.27□□□□□ -1.25
LSAMP-207ENST00000539563 LETM2Q2VYF4 491 aa7.27□□□□□ -1.25
LSAMP-207ENST00000539563 LMTK3Q96Q04 1460 aa7.27□□□□□ -1.25
LSAMP-207ENST00000539563 SH3TC1Q8TE82 1336 aa7.27□□□□□ -1.25
LSAMP-207ENST00000539563 STX10O60499 249 aa7.27□□□□□ -1.25
LSAMP-207ENST00000539563 PLCB3Q01970 1234 aa7.27□□□□□ -1.25
LSAMP-207ENST00000539563 FAM160A1Q05DH4 1040 aa7.27□□□□□ -1.25
LSAMP-207ENST00000539563 CCDC6Q16204 474 aa7.27□□□□□ -1.25
LSAMP-207ENST00000539563 NOC4LQ9BVI4 516 aaKnown RBP7.27□□□□□ -1.25
LSAMP-207ENST00000539563 GUCA1BQ9UMX6 200 aa7.27□□□□□ -1.25
LSAMP-207ENST00000539563 ALDH3A1P30838 453 aa7.27□□□□□ -1.25
LSAMP-207ENST00000539563 IL13P35225 146 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms