RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 PLCG2P16885 1265 aa16.47■□□□□ 0.23
CACNB1-206ENST00000539338 ARID5AQ03989 594 aa16.47■□□□□ 0.23
CACNB1-206ENST00000539338 TNFAIP1Q13829 316 aa16.47■□□□□ 0.23
CACNB1-206ENST00000539338 METTL22Q9BUU2 404 aaPredicted RBP16.47■□□□□ 0.23
CACNB1-206ENST00000539338 TAOK3Q9H2K8 898 aa16.47■□□□□ 0.23
CACNB1-206ENST00000539338 SBNO1A3KN83 1393 aa16.47■□□□□ 0.23
CACNB1-206ENST00000539338 CTNNA2P26232 953 aa16.46■□□□□ 0.23
CACNB1-206ENST00000539338 SUCLG2Q96I99 432 aa16.46■□□□□ 0.23
CACNB1-206ENST00000539338 EYA2O00167 538 aa16.46■□□□□ 0.23
CACNB1-206ENST00000539338 CALM1P0DP23 149 aa16.46■□□□□ 0.23
CACNB1-206ENST00000539338 CALM2P0DP24 149 aa16.46■□□□□ 0.23
CACNB1-206ENST00000539338 CALM3P0DP25 149 aa16.46■□□□□ 0.23
CACNB1-206ENST00000539338 UBXN1Q04323 297 aa16.46■□□□□ 0.23
CACNB1-206ENST00000539338 ZMYND15Q9H091 742 aa16.46■□□□□ 0.23
CACNB1-206ENST00000539338 GOLGA6L10A0A0M3HER8 536 aa16.46■□□□□ 0.23
CACNB1-206ENST00000539338 ERMNQ8TAM6 284 aa16.46■□□□□ 0.23
CACNB1-206ENST00000539338 PUF60Q9UHX1 559 aaKnown RBP16.46■□□□□ 0.23
CACNB1-206ENST00000539338 CSADQ9Y600 493 aa16.46■□□□□ 0.23
CACNB1-206ENST00000539338 LTKP29376 864 aa16.46■□□□□ 0.22
CACNB1-206ENST00000539338 MICALCLQ6ZW33 695 aa16.46■□□□□ 0.22
CACNB1-206ENST00000539338 C17orf53Q8N3J3 647 aaPredicted RBP16.46■□□□□ 0.22
CACNB1-206ENST00000539338 GUCA1BQ9UMX6 200 aa16.46■□□□□ 0.22
CACNB1-206ENST00000539338 ARHGEF5Q12774 1597 aa16.46■□□□□ 0.22
CACNB1-206ENST00000539338 PPIP5K2O43314 1243 aa16.45■□□□□ 0.22
CACNB1-206ENST00000539338 HSF2BPO75031 334 aa16.45■□□□□ 0.22
CACNB1-206ENST00000539338 UBE4AQ14139 1066 aa16.45■□□□□ 0.22
CACNB1-206ENST00000539338 CAPZA3Q96KX2 299 aa16.45■□□□□ 0.22
CACNB1-206ENST00000539338 SMC1AQ14683 1233 aaKnown RBP16.45■□□□□ 0.22
CACNB1-206ENST00000539338 SH2D4AQ9H788 454 aa16.45■□□□□ 0.22
CACNB1-206ENST00000539338 LMBRD1Q9NUN5 540 aa16.45■□□□□ 0.22
CACNB1-206ENST00000539338 CALML3P27482 149 aa16.45■□□□□ 0.22
CACNB1-206ENST00000539338 CALRP27797 417 aaKnown RBP16.45■□□□□ 0.22
CACNB1-206ENST00000539338 CA8P35219 290 aa16.45■□□□□ 0.22
CACNB1-206ENST00000539338 ZNF569Q5MCW4 686 aa16.45■□□□□ 0.22
CACNB1-206ENST00000539338 CCDC91Q7Z6B0 441 aa16.45■□□□□ 0.22
CACNB1-206ENST00000539338 GOLGA1Q92805 767 aa16.45■□□□□ 0.22
CACNB1-206ENST00000539338 SRRTQ9BXP5 876 aaKnown RBP16.45■□□□□ 0.22
CACNB1-206ENST00000539338 C6orf50Q9HD87 102 aa16.45■□□□□ 0.22
CACNB1-206ENST00000539338 MYL5Q02045 173 aa16.44■□□□□ 0.22
CACNB1-206ENST00000539338 KAT6BQ8WYB5 2073 aa16.44■□□□□ 0.22
CACNB1-206ENST00000539338 AOX1Q06278 1338 aa16.44■□□□□ 0.22
CACNB1-206ENST00000539338 HOOK3Q86VS8 718 aa16.44■□□□□ 0.22
CACNB1-206ENST00000539338 GJD4Q96KN9 370 aaPredicted RBP16.44■□□□□ 0.22
CACNB1-206ENST00000539338 IGSF3O75054 1194 aa16.44■□□□□ 0.22
CACNB1-206ENST00000539338 GSPT1P15170 499 aaKnown RBP16.44■□□□□ 0.22
CACNB1-206ENST00000539338 PABPC4Q13310 644 aaKnown RBP eCLIP16.44■□□□□ 0.22
CACNB1-206ENST00000539338 CEP112Q8N8E3 955 aa16.44■□□□□ 0.22
CACNB1-206ENST00000539338 PLBD2Q8NHP8 589 aa16.44■□□□□ 0.22
CACNB1-206ENST00000539338 DDX17Q92841 729 aaKnown RBP16.44■□□□□ 0.22
CACNB1-206ENST00000539338 ELP1O95163 1332 aa16.44■□□□□ 0.22
CACNB1-206ENST00000539338 VWA3AA6NCI4 1184 aa16.44■□□□□ 0.22
CACNB1-206ENST00000539338 TACC1O75410 805 aa16.44■□□□□ 0.22
CACNB1-206ENST00000539338 ZNF174Q15697 407 aa16.44■□□□□ 0.22
CACNB1-206ENST00000539338 LPXNO60711 386 aa16.43■□□□□ 0.22
CACNB1-206ENST00000539338 IFI16Q16666 785 aaKnown RBP16.43■□□□□ 0.22
CACNB1-206ENST00000539338 ZNF445P59923 1031 aa16.43■□□□□ 0.22
CACNB1-206ENST00000539338 RIMBP2O15034 1052 aa16.43■□□□□ 0.22
CACNB1-206ENST00000539338 CDC37L1Q7L3B6 337 aa16.43■□□□□ 0.22
CACNB1-206ENST00000539338 CCDC42Q96M95 316 aa16.43■□□□□ 0.22
CACNB1-206ENST00000539338 NOD1Q9Y239 953 aa16.43■□□□□ 0.22
CACNB1-206ENST00000539338 KIF5AQ12840 1032 aa16.43■□□□□ 0.22
CACNB1-206ENST00000539338 KIAA0753Q2KHM9 967 aa16.43■□□□□ 0.22
CACNB1-206ENST00000539338 ATL3Q6DD88 541 aa16.43■□□□□ 0.22
CACNB1-206ENST00000539338 GIMAP7Q8NHV1 300 aa16.43■□□□□ 0.22
CACNB1-206ENST00000539338 XAGE2Q96GT9 111 aa16.43■□□□□ 0.22
CACNB1-206ENST00000539338 CLSTN2Q9H4D0 955 aa16.43■□□□□ 0.22
CACNB1-206ENST00000539338 BABAM1Q9NWV8 329 aa16.43■□□□□ 0.22
CACNB1-206ENST00000539338 TUBB4AP04350 444 aa16.42■□□□□ 0.22
CACNB1-206ENST00000539338 RHOXF2BP0C7M4 288 aa16.42■□□□□ 0.22
CACNB1-206ENST00000539338 ITGA6P23229 1130 aa16.42■□□□□ 0.22
CACNB1-206ENST00000539338 RHOXF2Q9BQY4 288 aa16.42■□□□□ 0.22
CACNB1-206ENST00000539338 SPC25Q9HBM1 224 aa16.42■□□□□ 0.22
CACNB1-206ENST00000539338 GGA1Q9UJY5 639 aa16.42■□□□□ 0.22
CACNB1-206ENST00000539338 KRT86O43790 486 aa16.42■□□□□ 0.22
CACNB1-206ENST00000539338 KRT83P78385 493 aa16.42■□□□□ 0.22
CACNB1-206ENST00000539338 ANO1Q5XXA6 986 aa16.42■□□□□ 0.22
CACNB1-206ENST00000539338 IQUBQ8NA54 791 aa16.42■□□□□ 0.22
CACNB1-206ENST00000539338 LEO1Q8WVC0 666 aaPredicted RBP16.42■□□□□ 0.22
CACNB1-206ENST00000539338 RRP36Q96EU6 259 aaKnown RBP16.42■□□□□ 0.22
CACNB1-206ENST00000539338 EFCAB6Q5THR3 1501 aa16.42■□□□□ 0.22
CACNB1-206ENST00000539338 KRT79Q5XKE5 535 aa16.42■□□□□ 0.22
CACNB1-206ENST00000539338 CCDC174Q6PII3 467 aa16.42■□□□□ 0.22
CACNB1-206ENST00000539338 DTHD1Q6ZMT9 781 aa16.42■□□□□ 0.22
CACNB1-206ENST00000539338 BICD1Q96G01 975 aa16.42■□□□□ 0.22
CACNB1-206ENST00000539338 ARMT1Q9H993 441 aa16.42■□□□□ 0.22
CACNB1-206ENST00000539338 HOXB7P09629 217 aa16.42■□□□□ 0.22
CACNB1-206ENST00000539338 HSPA4P34932 840 aa16.42■□□□□ 0.22
CACNB1-206ENST00000539338 CCT6AP40227 531 aaKnown RBP16.42■□□□□ 0.22
CACNB1-206ENST00000539338 CBX8Q9HC52 389 aa16.42■□□□□ 0.22
CACNB1-206ENST00000539338 JAK2O60674 1132 aa16.41■□□□□ 0.22
CACNB1-206ENST00000539338 TBC1D5Q92609 795 aa16.41■□□□□ 0.22
CACNB1-206ENST00000539338 BAG1Q99933 345 aaPredicted RBP16.41■□□□□ 0.22
CACNB1-206ENST00000539338 CCDC94Q9BW85 323 aaPredicted RBP16.41■□□□□ 0.22
CACNB1-206ENST00000539338 ATP2C2O75185 946 aa16.41■□□□□ 0.22
CACNB1-206ENST00000539338 TMEM63CQ9P1W3 806 aa16.41■□□□□ 0.22
CACNB1-206ENST00000539338 PSDA5PKW4 1024 aaPredicted RBP16.4■□□□□ 0.22
CACNB1-206ENST00000539338 GPAA1O43292 621 aa16.4■□□□□ 0.22
CACNB1-206ENST00000539338 CC2D2BQ6DHV5 1058 aa16.4■□□□□ 0.22
CACNB1-206ENST00000539338 ABCC4O15439 1325 aa16.4■□□□□ 0.22
CACNB1-206ENST00000539338 A1BGP04217 495 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms