RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 ASPAP45381 313 aa10.4□□□□□ -0.74
CCDC7-209ENST00000539197 DUSP27Q5VZP5 1158 aa10.4□□□□□ -0.74
CCDC7-209ENST00000539197 VSIG10LQ86VR7 867 aa10.4□□□□□ -0.74
CCDC7-209ENST00000539197 CYP27A1Q02318 531 aa10.39□□□□□ -0.75
CCDC7-209ENST00000539197 PTPN12Q05209 780 aaKnown RBP10.39□□□□□ -0.75
CCDC7-209ENST00000539197 GRM2Q14416 872 aa10.39□□□□□ -0.75
CCDC7-209ENST00000539197 PDE3AQ14432 1141 aa10.39□□□□□ -0.75
CCDC7-209ENST00000539197 PI16Q6UXB8 463 aa10.39□□□□□ -0.75
CCDC7-209ENST00000539197 ZNF765Q7L2R6 523 aa10.39□□□□□ -0.75
CCDC7-209ENST00000539197 FBXL18Q96ME1 805 aa10.39□□□□□ -0.75
CCDC7-209ENST00000539197 LRRC4CQ9HCJ2 640 aa10.39□□□□□ -0.75
CCDC7-209ENST00000539197 TMEM238LA0A1B0GVL6 79 aa10.38□□□□□ -0.75
CCDC7-209ENST00000539197 LIG1P18858 919 aa10.38□□□□□ -0.75
CCDC7-209ENST00000539197 AP3B2Q13367 1082 aa10.38□□□□□ -0.75
CCDC7-209ENST00000539197 SEZ6L2Q6UXD5 910 aa10.38□□□□□ -0.75
CCDC7-209ENST00000539197 DNAJC25Q9H1X3 360 aa10.38□□□□□ -0.75
CCDC7-209ENST00000539197 GSX1Q9H4S2 264 aaPredicted RBP10.38□□□□□ -0.75
CCDC7-209ENST00000539197 CCDC86Q9H6F5 360 aaKnown RBP10.38□□□□□ -0.75
CCDC7-209ENST00000539197 C1GALT1Q9NS00 363 aa10.38□□□□□ -0.75
CCDC7-209ENST00000539197 BSDC1Q9NW68 430 aaPredicted RBP10.38□□□□□ -0.75
CCDC7-209ENST00000539197 DAGLAQ9Y4D2 1042 aa10.38□□□□□ -0.75
CCDC7-209ENST00000539197 COL19A1Q14993 1142 aa10.37□□□□□ -0.75
CCDC7-209ENST00000539197 PRPF40BQ6NWY9 871 aaKnown RBP10.37□□□□□ -0.75
CCDC7-209ENST00000539197 CSRNP1Q96S65 589 aa10.37□□□□□ -0.75
CCDC7-209ENST00000539197 TP53INP2Q8IXH6 220 aa10.36□□□□□ -0.75
CCDC7-209ENST00000539197 ZC3H7BQ9UGR2 993 aaKnown RBP10.36□□□□□ -0.75
CCDC7-209ENST00000539197 SYNGAP1Q96PV0 1343 aa10.35□□□□□ -0.75
CCDC7-209ENST00000539197 RPS26P11Q5JNZ5 115 aaPredicted RBP10.35□□□□□ -0.75
CCDC7-209ENST00000539197 TRAK1Q9UPV9 953 aa10.35□□□□□ -0.75
CCDC7-209ENST00000539197 TMPRSS2O15393 492 aa10.34□□□□□ -0.75
CCDC7-209ENST00000539197 ZNF862O60290 1169 aa10.34□□□□□ -0.75
CCDC7-209ENST00000539197 BTBD11A6QL63 1104 aa10.33□□□□□ -0.76
CCDC7-209ENST00000539197 KRTAP9-9Q9BYP9 154 aa10.33□□□□□ -0.76
CCDC7-209ENST00000539197 KRTAP9-4Q9BYQ2 154 aa10.33□□□□□ -0.76
CCDC7-209ENST00000539197 SOWAHDA6NJG2 315 aa10.32□□□□□ -0.76
CCDC7-209ENST00000539197 FCGRTP55899 365 aa10.32□□□□□ -0.76
CCDC7-209ENST00000539197 TMC7Q7Z402 723 aa10.32□□□□□ -0.76
CCDC7-209ENST00000539197 DMRTB1Q96MA1 342 aa10.32□□□□□ -0.76
CCDC7-209ENST00000539197 RBCK1Q9BYM8 510 aa10.32□□□□□ -0.76
CCDC7-209ENST00000539197 YBX3P16989 372 aaKnown RBP eCLIP10.31□□□□□ -0.76
CCDC7-209ENST00000539197 CDK5R2Q13319 367 aa10.31□□□□□ -0.76
CCDC7-209ENST00000539197 FLCNQ8NFG4 579 aa10.31□□□□□ -0.76
CCDC7-209ENST00000539197 STK35Q8TDR2 534 aa10.31□□□□□ -0.76
CCDC7-209ENST00000539197 ALKBH8Q96BT7 664 aaKnown RBP10.31□□□□□ -0.76
CCDC7-209ENST00000539197 CRIM1Q9NZV1 1036 aa10.31□□□□□ -0.76
CCDC7-209ENST00000539197 SLFN14P0C7P3 912 aa10.3□□□□□ -0.76
CCDC7-209ENST00000539197 HNRNPUQ00839 825 aaKnown RBP eCLIP10.3□□□□□ -0.76
CCDC7-209ENST00000539197 PDE4CQ08493 712 aa10.3□□□□□ -0.76
CCDC7-209ENST00000539197 OGFOD3Q6PK18 319 aa10.3□□□□□ -0.76
CCDC7-209ENST00000539197 DTHD1Q6ZMT9 781 aa10.3□□□□□ -0.76
CCDC7-209ENST00000539197 AGBL5Q8NDL9 886 aa10.3□□□□□ -0.76
CCDC7-209ENST00000539197 CCER1Q8TC90 406 aaPredicted RBP10.3□□□□□ -0.76
CCDC7-209ENST00000539197 FANCD2OSQ96PS1 177 aa10.3□□□□□ -0.76
CCDC7-209ENST00000539197 GSTP1P09211 210 aaKnown RBP10.29□□□□□ -0.76
CCDC7-209ENST00000539197 CBLL1Q75N03 491 aa10.29□□□□□ -0.76
CCDC7-209ENST00000539197 PIDD1Q9HB75 910 aa10.29□□□□□ -0.76
CCDC7-209ENST00000539197 PAK6Q9NQU5 681 aaPredicted RBP10.29□□□□□ -0.76
CCDC7-209ENST00000539197 DISC1Q9NRI5 854 aa10.29□□□□□ -0.76
CCDC7-209ENST00000539197 GPN3Q9UHW5 284 aaPredicted RBP10.29□□□□□ -0.76
CCDC7-209ENST00000539197 PCDHGC5Q9Y5F6 944 aa10.29□□□□□ -0.76
CCDC7-209ENST00000539197 U3KQE9 123 aa10.29□□□□□ -0.76
CCDC7-209ENST00000539197 CYP27C1Q4G0S4 372 aa10.28□□□□□ -0.76
CCDC7-209ENST00000539197 ZNF574Q6ZN55 896 aaPredicted RBP10.28□□□□□ -0.76
CCDC7-209ENST00000539197 PDZD3Q86UT5 571 aa10.28□□□□□ -0.76
CCDC7-209ENST00000539197 BCO2Q9BYV7 579 aa10.28□□□□□ -0.76
CCDC7-209ENST00000539197 ATXN3LQ9H3M9 355 aa10.28□□□□□ -0.76
CCDC7-209ENST00000539197 PPP4R2Q9NY27 417 aa10.28□□□□□ -0.76
CCDC7-209ENST00000539197 ID3Q02535 119 aa10.27□□□□□ -0.77
CCDC7-209ENST00000539197 WFDC3Q8IUB2 231 aa10.27□□□□□ -0.77
CCDC7-209ENST00000539197 BIN2Q9UBW5 565 aaPredicted RBP10.27□□□□□ -0.77
CCDC7-209ENST00000539197 PPP2R3AQ06190 1150 aa10.26□□□□□ -0.77
CCDC7-209ENST00000539197 TTLL4Q14679 1199 aa10.26□□□□□ -0.77
CCDC7-209ENST00000539197 KIF4BQ2VIQ3 1234 aa10.26□□□□□ -0.77
CCDC7-209ENST00000539197 NXPE4Q6UWF7 544 aa10.26□□□□□ -0.77
CCDC7-209ENST00000539197 FAM181AQ8N9Y4 354 aa10.26□□□□□ -0.77
CCDC7-209ENST00000539197 KCNB2Q92953 911 aa10.26□□□□□ -0.77
CCDC7-209ENST00000539197 KRT82Q9NSB4 513 aa10.26□□□□□ -0.77
CCDC7-209ENST00000539197 NLRP2Q9NX02 1062 aa10.26□□□□□ -0.77
CCDC7-209ENST00000539197 FAM87AP0C7U9 286 aa10.25□□□□□ -0.77
CCDC7-209ENST00000539197 HCLS1P14317 486 aaPredicted RBP10.25□□□□□ -0.77
CCDC7-209ENST00000539197 MPRIPQ6WCQ1 1025 aa10.25□□□□□ -0.77
CCDC7-209ENST00000539197 SPRED2Q7Z698 418 aa10.25□□□□□ -0.77
CCDC7-209ENST00000539197 BCL7CQ8WUZ0 217 aaPredicted RBP10.25□□□□□ -0.77
CCDC7-209ENST00000539197 ASIC4Q96FT7 647 aa10.25□□□□□ -0.77
CCDC7-209ENST00000539197 SLC5A6Q9Y289 635 aa10.25□□□□□ -0.77
CCDC7-209ENST00000539197 LEFTY1O75610 366 aa10.24□□□□□ -0.77
CCDC7-209ENST00000539197 BNIP3Q12983 259 aa10.24□□□□□ -0.77
CCDC7-209ENST00000539197 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.24□□□□□ -0.77
CCDC7-209ENST00000539197 SMYD4Q8IYR2 804 aaPredicted RBP10.24□□□□□ -0.77
CCDC7-209ENST00000539197 TMEM39AQ9NV64 488 aa10.24□□□□□ -0.77
CCDC7-209ENST00000539197 AKAP2Q9Y2D5 859 aa10.24□□□□□ -0.77
CCDC7-209ENST00000539197 PNMA6FA0A0J9YX94 578 aa10.23□□□□□ -0.77
CCDC7-209ENST00000539197 RNGTTO60942 597 aaKnown RBP10.23□□□□□ -0.77
CCDC7-209ENST00000539197 NEFMP07197 916 aa10.23□□□□□ -0.77
CCDC7-209ENST00000539197 XRCC5P13010 732 aaKnown RBP10.23□□□□□ -0.77
CCDC7-209ENST00000539197 DSC3Q14574 896 aa10.23□□□□□ -0.77
CCDC7-209ENST00000539197 SULF2Q8IWU5 870 aa10.23□□□□□ -0.77
CCDC7-209ENST00000539197 STK11IPQ8N1F8 1099 aa10.23□□□□□ -0.77
CCDC7-209ENST00000539197 PLD6Q8N2A8 252 aaKnown RBP10.23□□□□□ -0.77
CCDC7-209ENST00000539197 SETDB2Q96T68 719 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms