RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 GRIN3BO60391 1043 aa16.98■□□□□ 0.31
CDCA3-207ENST00000538862 CSF1RP07333 972 aa16.98■□□□□ 0.31
CDCA3-207ENST00000538862 CDC25BP30305 580 aa16.98■□□□□ 0.31
CDCA3-207ENST00000538862 IMMTQ16891 758 aaKnown RBP16.98■□□□□ 0.31
CDCA3-207ENST00000538862 CCDC73Q6ZRK6 1079 aa16.98■□□□□ 0.31
CDCA3-207ENST00000538862 CNBD1Q8NA66 436 aa16.97■□□□□ 0.31
CDCA3-207ENST00000538862 NCOA5Q9HCD5 579 aaKnown RBP16.97■□□□□ 0.31
CDCA3-207ENST00000538862 DHX16O60231 1041 aaKnown RBP16.96■□□□□ 0.31
CDCA3-207ENST00000538862 PTGS1P23219 599 aa16.96■□□□□ 0.31
CDCA3-207ENST00000538862 CEBPZQ03701 1054 aaKnown RBP16.96■□□□□ 0.31
CDCA3-207ENST00000538862 SNW1Q13573 536 aaKnown RBP16.96■□□□□ 0.31
CDCA3-207ENST00000538862 IQCB1Q15051 598 aa16.96■□□□□ 0.31
CDCA3-207ENST00000538862 STX1AQ16623 288 aa16.96■□□□□ 0.31
CDCA3-207ENST00000538862 TTLL5Q6EMB2 1281 aa16.96■□□□□ 0.31
CDCA3-207ENST00000538862 SARM1Q6SZW1 724 aa16.96■□□□□ 0.31
CDCA3-207ENST00000538862 NBPF5PQ86XG9 351 aaPredicted RBP16.96■□□□□ 0.31
CDCA3-207ENST00000538862 ENGASEQ8NFI3 743 aa16.96■□□□□ 0.31
CDCA3-207ENST00000538862 APPBP2Q92624 585 aa16.96■□□□□ 0.31
CDCA3-207ENST00000538862 GPTP24298 496 aa16.96■□□□□ 0.3
CDCA3-207ENST00000538862 FAM160A1Q05DH4 1040 aa16.96■□□□□ 0.3
CDCA3-207ENST00000538862 CCDC186Q7Z3E2 898 aa16.96■□□□□ 0.3
CDCA3-207ENST00000538862 DRC7Q8IY82 874 aa16.96■□□□□ 0.3
CDCA3-207ENST00000538862 ZBTB38Q8NAP3 1195 aaPredicted RBP16.96■□□□□ 0.3
CDCA3-207ENST00000538862 RGS22Q8NE09 1264 aa16.96■□□□□ 0.3
CDCA3-207ENST00000538862 PIM2Q9P1W9 311 aa16.96■□□□□ 0.3
CDCA3-207ENST00000538862 WDR19Q8NEZ3 1342 aa16.95■□□□□ 0.3
CDCA3-207ENST00000538862 COL11A2P13942 1736 aaPredicted RBP16.95■□□□□ 0.3
CDCA3-207ENST00000538862 FOXP2O15409 715 aa16.95■□□□□ 0.3
CDCA3-207ENST00000538862 KINO60870 393 aaKnown RBP16.95■□□□□ 0.3
CDCA3-207ENST00000538862 FGAP02671 866 aa16.95■□□□□ 0.3
CDCA3-207ENST00000538862 FDPSP14324 419 aaKnown RBP16.95■□□□□ 0.3
CDCA3-207ENST00000538862 ADORA1P30542 326 aa16.95■□□□□ 0.3
CDCA3-207ENST00000538862 IFIT5Q13325 482 aaKnown RBP16.95■□□□□ 0.3
CDCA3-207ENST00000538862 WASHC4Q2M389 1173 aa16.95■□□□□ 0.3
CDCA3-207ENST00000538862 C2CD5Q86YS7 1000 aa16.95■□□□□ 0.3
CDCA3-207ENST00000538862 GOLPH3LQ9H4A5 285 aa16.95■□□□□ 0.3
CDCA3-207ENST00000538862 RTEL1Q9NZ71 1219 aa16.95■□□□□ 0.3
CDCA3-207ENST00000538862 NAP1L2Q9ULW6 460 aaPredicted RBP16.95■□□□□ 0.3
CDCA3-207ENST00000538862 DLEC1Q9Y238 1755 aa16.95■□□□□ 0.3
CDCA3-207ENST00000538862 MYH7P12883 1935 aa16.95■□□□□ 0.3
CDCA3-207ENST00000538862 ERVV-1B6SEH8 477 aa16.94■□□□□ 0.3
CDCA3-207ENST00000538862 GOLGA6L19H0YKK7 550 aa16.94■□□□□ 0.3
CDCA3-207ENST00000538862 CHAF1AQ13111 956 aaPredicted RBP16.94■□□□□ 0.3
CDCA3-207ENST00000538862 CHST3Q7LGC8 479 aa16.94■□□□□ 0.3
CDCA3-207ENST00000538862 MB21D2Q8IYB1 491 aaPredicted RBP16.94■□□□□ 0.3
CDCA3-207ENST00000538862 CDHR2Q9BYE9 1310 aa16.94■□□□□ 0.3
CDCA3-207ENST00000538862 FOSBP53539 338 aa16.94■□□□□ 0.3
CDCA3-207ENST00000538862 TAF7LQ5H9L4 462 aa16.94■□□□□ 0.3
CDCA3-207ENST00000538862 ADALQ6DHV7 355 aa16.94■□□□□ 0.3
CDCA3-207ENST00000538862 NCOA7Q8NI08 942 aa16.94■□□□□ 0.3
CDCA3-207ENST00000538862 ZNF512BQ96KM6 892 aaPredicted RBP16.94■□□□□ 0.3
CDCA3-207ENST00000538862 FTOQ9C0B1 505 aaKnown RBP eCLIP16.94■□□□□ 0.3
CDCA3-207ENST00000538862 ANO10Q9NW15 660 aa16.94■□□□□ 0.3
CDCA3-207ENST00000538862 ARFGEF1Q9Y6D6 1849 aa16.94■□□□□ 0.3
CDCA3-207ENST00000538862 UBN2Q6ZU65 1347 aa16.93■□□□□ 0.3
CDCA3-207ENST00000538862 A0A1W2PQ27 194 aa16.93■□□□□ 0.3
CDCA3-207ENST00000538862 A0A1W2PQ64 194 aa16.93■□□□□ 0.3
CDCA3-207ENST00000538862 A0A1W2PQD8 194 aa16.93■□□□□ 0.3
CDCA3-207ENST00000538862 ZAP70P43403 619 aa16.93■□□□□ 0.3
CDCA3-207ENST00000538862 ME1P48163 572 aa16.93■□□□□ 0.3
CDCA3-207ENST00000538862 ST5P78524 1137 aa16.93■□□□□ 0.3
CDCA3-207ENST00000538862 DALRD3Q5D0E6 543 aaKnown RBP16.93■□□□□ 0.3
CDCA3-207ENST00000538862 MRFAP1L1Q96HT8 127 aa16.93■□□□□ 0.3
CDCA3-207ENST00000538862 BRIP1Q9BX63 1249 aa16.93■□□□□ 0.3
CDCA3-207ENST00000538862 CACNA1SQ13698 1873 aa16.93■□□□□ 0.3
CDCA3-207ENST00000538862 PRC1O43663 620 aa16.92■□□□□ 0.3
CDCA3-207ENST00000538862 ZSCAN25Q6NSZ9 544 aa16.92■□□□□ 0.3
CDCA3-207ENST00000538862 GIGYF2Q6Y7W6 1299 aaKnown RBP16.92■□□□□ 0.3
CDCA3-207ENST00000538862 FSIP1Q8NA03 581 aa16.92■□□□□ 0.3
CDCA3-207ENST00000538862 FAM89AQ96GI7 184 aa16.92■□□□□ 0.3
CDCA3-207ENST00000538862 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.92■□□□□ 0.3
CDCA3-207ENST00000538862 CLIP2Q9UDT6 1046 aa16.92■□□□□ 0.3
CDCA3-207ENST00000538862 DDX60Q8IY21 1712 aaKnown RBP16.92■□□□□ 0.3
CDCA3-207ENST00000538862 H0YIN7 160 aa16.92■□□□□ 0.3
CDCA3-207ENST00000538862 RGL2O15211 777 aa16.92■□□□□ 0.3
CDCA3-207ENST00000538862 GUCY1B3Q02153 619 aa16.92■□□□□ 0.3
CDCA3-207ENST00000538862 SCARF1Q14162 830 aa16.92■□□□□ 0.3
CDCA3-207ENST00000538862 PUS7LQ9H0K6 701 aaKnown RBP16.92■□□□□ 0.3
CDCA3-207ENST00000538862 PCDHA7Q9UN72 937 aa16.92■□□□□ 0.3
CDCA3-207ENST00000538862 RIPOR2Q9Y4F9 1068 aa16.92■□□□□ 0.3
CDCA3-207ENST00000538862 ZNF213O14771 459 aa16.91■□□□□ 0.3
CDCA3-207ENST00000538862 HAND2P61296 217 aa16.91■□□□□ 0.3
CDCA3-207ENST00000538862 ATP2B3Q16720 1220 aa16.91■□□□□ 0.3
CDCA3-207ENST00000538862 HSP90AB3PQ58FF7 597 aa16.91■□□□□ 0.3
CDCA3-207ENST00000538862 TPTE2Q6XPS3 522 aa16.91■□□□□ 0.3
CDCA3-207ENST00000538862 C11orf57Q6ZUT1 292 aaPredicted RBP16.91■□□□□ 0.3
CDCA3-207ENST00000538862 BRAPQ7Z569 592 aa16.91■□□□□ 0.3
CDCA3-207ENST00000538862 RALYLQ86SE5 291 aaKnown RBP16.91■□□□□ 0.3
CDCA3-207ENST00000538862 FBXO18Q8NFZ0 1043 aa16.91■□□□□ 0.3
CDCA3-207ENST00000538862 MRPS27Q92552 414 aaKnown RBP16.91■□□□□ 0.3
CDCA3-207ENST00000538862 ZNF622Q969S3 477 aaKnown RBP eCLIP16.91■□□□□ 0.34e-7■□□□□ 9.1
CDCA3-207ENST00000538862 C8orf76Q96K31 380 aa16.91■□□□□ 0.3
CDCA3-207ENST00000538862 POLR3EQ9NVU0 708 aa16.91■□□□□ 0.3
CDCA3-207ENST00000538862 NRBP1Q9UHY1 535 aa16.91■□□□□ 0.3
CDCA3-207ENST00000538862 ANKRD36CQ5JPF3 1778 aa16.9■□□□□ 0.3
CDCA3-207ENST00000538862 KLF18A0A0U1RQI7 1052 aa16.9■□□□□ 0.3
CDCA3-207ENST00000538862 GPAA1O43292 621 aa16.9■□□□□ 0.3
CDCA3-207ENST00000538862 NEMFO60524 1076 aa16.9■□□□□ 0.3
CDCA3-207ENST00000538862 YEATS4O95619 227 aa16.9■□□□□ 0.3
CDCA3-207ENST00000538862 PDE6BP35913 854 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms