RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 MARCKSP29966 332 aaPredicted RBP21.32■■□□□ 1
SFSWAP-207ENST00000538548 ZMYM1Q5SVZ6 1142 aa21.32■■□□□ 1
SFSWAP-207ENST00000538548 SPECC1LQ69YQ0 1117 aa21.32■■□□□ 1
SFSWAP-207ENST00000538548 FAM237AA0A1B0GTK4 181 aa21.32■■□□□ 1
SFSWAP-207ENST00000538548 JMYQ8N9B5 988 aa21.32■■□□□ 1
SFSWAP-207ENST00000538548 ANKRD24Q8TF21 1146 aa21.32■■□□□ 1
SFSWAP-207ENST00000538548 LTN1O94822 1766 aa21.31■■□□□ 1
SFSWAP-207ENST00000538548 CUTAO60888 179 aa21.31■■□□□ 1
SFSWAP-207ENST00000538548 ERLIN1O75477 346 aa21.31■■□□□ 1
SFSWAP-207ENST00000538548 MCM6Q14566 821 aa21.31■■□□□ 1
SFSWAP-207ENST00000538548 RGS22Q8NE09 1264 aa21.31■■□□□ 1
SFSWAP-207ENST00000538548 YY1AP1Q9H869 796 aa21.31■■□□□ 1
SFSWAP-207ENST00000538548 ANKZF1Q9H8Y5 726 aa21.31■■□□□ 1
SFSWAP-207ENST00000538548 KDM4FA0A1W2PPD8 638 aa21.31■■□□□ 1
SFSWAP-207ENST00000538548 PPP6R2O75170 966 aa21.31■■□□□ 1
SFSWAP-207ENST00000538548 TUBB4BP68371 445 aa21.31■■□□□ 1
SFSWAP-207ENST00000538548 PDIA6Q15084 440 aa21.31■■□□□ 1
SFSWAP-207ENST00000538548 CEP112Q8N8E3 955 aa21.3■■□□□ 1
SFSWAP-207ENST00000538548 MSANTD4Q8NCY6 345 aa21.3■■□□□ 1
SFSWAP-207ENST00000538548 PAG1Q9NWQ8 432 aa21.3■■□□□ 1
SFSWAP-207ENST00000538548 ADKP55263 362 aaKnown RBP21.3■■□□□ 1
SFSWAP-207ENST00000538548 SHC4Q6S5L8 630 aa21.3■■□□□ 1
SFSWAP-207ENST00000538548 A0A1B0GUL7 405 aa21.29■■□□□ 1
SFSWAP-207ENST00000538548 GOLIM4O00461 696 aa21.29■■□□□ 1
SFSWAP-207ENST00000538548 CCDC175P0C221 793 aa21.29■■□□□ 1
SFSWAP-207ENST00000538548 KARSQ15046 597 aaKnown RBP21.29■■□□□ 1
SFSWAP-207ENST00000538548 AMOTQ4VCS5 1084 aa21.29■■□□□ 1
SFSWAP-207ENST00000538548 ICE2Q659A1 982 aa21.29■■□□□ 1
SFSWAP-207ENST00000538548 CPLX1O14810 134 aa21.29■■□□□ 1
SFSWAP-207ENST00000538548 MAGEA9P43362 315 aa21.29■■□□□ 1
SFSWAP-207ENST00000538548 C1orf141Q5JVX7 400 aa21.29■■□□□ 1
SFSWAP-207ENST00000538548 METTL16Q86W50 562 aaKnown RBP21.29■■□□□ 1
SFSWAP-207ENST00000538548 DESI2Q9BSY9 194 aa21.29■■□□□ 1
SFSWAP-207ENST00000538548 ZSWIM4Q9H7M6 989 aa21.29■■□□□ 1
SFSWAP-207ENST00000538548 GPHNQ9NQX3 736 aaPredicted RBP21.29■■□□□ 1
SFSWAP-207ENST00000538548 GJB4Q9NTQ9 266 aa21.29■■□□□ 1
SFSWAP-207ENST00000538548 L1RE1Q9UN81 338 aa21.29■■□□□ 1
SFSWAP-207ENST00000538548 MRPL44Q9H9J2 332 aaKnown RBP21.28■■□□□ 1
SFSWAP-207ENST00000538548 MKRN1Q9UHC7 482 aaKnown RBP21.28■■□□□ 1
SFSWAP-207ENST00000538548 CDC23Q9UJX2 597 aa21.28■■□□□ 1
SFSWAP-207ENST00000538548 HPS5Q9UPZ3 1129 aa21.28■■□□□ 1
SFSWAP-207ENST00000538548 GOLGA8BA8MQT2 603 aa21.28■■□□□ 1
SFSWAP-207ENST00000538548 TUBB2AQ13885 445 aa21.28■■□□□ 1
SFSWAP-207ENST00000538548 RABL6Q3YEC7 729 aaPredicted RBP21.28■■□□□ 1
SFSWAP-207ENST00000538548 RESP18Q5W5W9 173 aa21.28■■□□□ 1
SFSWAP-207ENST00000538548 METTL22Q9BUU2 404 aaPredicted RBP21.28■■□□□ 1
SFSWAP-207ENST00000538548 TUBB2BQ9BVA1 445 aa21.28■■□□□ 1
SFSWAP-207ENST00000538548 MAST3O60307 1309 aa21.28■■□□□ 1
SFSWAP-207ENST00000538548 KLF18A0A0U1RQI7 1052 aa21.27■■□□□ 1
SFSWAP-207ENST00000538548 CCDC102BQ68D86 513 aa21.27■■□□□ 1
SFSWAP-207ENST00000538548 MYD88Q99836 296 aa21.27■■□□□ 1
SFSWAP-207ENST00000538548 PCDHA5Q9Y5H7 936 aa21.27■■□□□ 1
SFSWAP-207ENST00000538548 ZNF18P17022 549 aa21.27■■□□□ 1
SFSWAP-207ENST00000538548 CERS3Q8IU89 383 aa21.27■■□□□ 1
SFSWAP-207ENST00000538548 PDE4BQ07343 736 aa21.26■□□□□ 0.99
SFSWAP-207ENST00000538548 FOXP4Q8IVH2 680 aaPredicted RBP21.26■□□□□ 0.99
SFSWAP-207ENST00000538548 PNKPQ96T60 521 aa21.26■□□□□ 0.99
SFSWAP-207ENST00000538548 FAN1Q9Y2M0 1017 aa21.26■□□□□ 0.99
SFSWAP-207ENST00000538548 PXDNQ92626 1479 aa21.26■□□□□ 0.99
SFSWAP-207ENST00000538548 BMP6P22004 513 aa21.26■□□□□ 0.99
SFSWAP-207ENST00000538548 CDC27P30260 824 aa21.26■□□□□ 0.99
SFSWAP-207ENST00000538548 PTPAQ15257 358 aa21.26■□□□□ 0.99
SFSWAP-207ENST00000538548 TTLL5Q6EMB2 1281 aa21.26■□□□□ 0.99
SFSWAP-207ENST00000538548 IRX2Q9BZI1 471 aaPredicted RBP21.26■□□□□ 0.99
SFSWAP-207ENST00000538548 GTF2A1P52655 376 aaPredicted RBP21.25■□□□□ 0.99
SFSWAP-207ENST00000538548 TTC31Q49AM3 519 aaPredicted RBP21.25■□□□□ 0.99
SFSWAP-207ENST00000538548 CNNM3Q8NE01 707 aa21.25■□□□□ 0.99
SFSWAP-207ENST00000538548 ABCB6Q9NP58 842 aa21.25■□□□□ 0.99
SFSWAP-207ENST00000538548 PUF60Q9UHX1 559 aaKnown RBP21.25■□□□□ 0.99
SFSWAP-207ENST00000538548 KIF5CO60282 957 aa21.25■□□□□ 0.99
SFSWAP-207ENST00000538548 LONRF3Q496Y0 759 aa21.25■□□□□ 0.99
SFSWAP-207ENST00000538548 ELOA2Q8IYF1 753 aaPredicted RBP21.25■□□□□ 0.99
SFSWAP-207ENST00000538548 FAM71BQ8TC56 605 aa21.25■□□□□ 0.99
SFSWAP-207ENST00000538548 ZFP91Q96JP5 570 aaPredicted RBP21.25■□□□□ 0.99
SFSWAP-207ENST00000538548 PANX2Q96RD6 677 aa21.25■□□□□ 0.99
SFSWAP-207ENST00000538548 NFE2L3Q9Y4A8 694 aa21.25■□□□□ 0.99
SFSWAP-207ENST00000538548 RNF113AO15541 343 aaKnown RBP21.25■□□□□ 0.99
SFSWAP-207ENST00000538548 N4BP1O75113 896 aaKnown RBP21.25■□□□□ 0.99
SFSWAP-207ENST00000538548 HSP90AA4PQ58FG1 418 aa21.25■□□□□ 0.99
SFSWAP-207ENST00000538548 GBP3Q9H0R5 595 aa21.25■□□□□ 0.99
SFSWAP-207ENST00000538548 RAI14Q9P0K7 980 aa21.25■□□□□ 0.99
SFSWAP-207ENST00000538548 EIF3CLB5ME19 914 aaKnown RBP21.24■□□□□ 0.99
SFSWAP-207ENST00000538548 PRC1O43663 620 aa21.24■□□□□ 0.99
SFSWAP-207ENST00000538548 HSP90B2PQ58FF3 399 aa21.24■□□□□ 0.99
SFSWAP-207ENST00000538548 ARHGEF25Q86VW2 580 aa21.24■□□□□ 0.99
SFSWAP-207ENST00000538548 VPS37DQ86XT2 251 aa21.24■□□□□ 0.99
SFSWAP-207ENST00000538548 EIF3CQ99613 913 aaKnown RBP21.24■□□□□ 0.99
SFSWAP-207ENST00000538548 BRMS1Q9HCU9 246 aa21.24■□□□□ 0.99
SFSWAP-207ENST00000538548 MTF1Q14872 753 aa21.24■□□□□ 0.99
SFSWAP-207ENST00000538548 FOXR1Q6PIV2 292 aa21.24■□□□□ 0.99
SFSWAP-207ENST00000538548 ENOX1Q8TC92 643 aaKnown RBP21.24■□□□□ 0.99
SFSWAP-207ENST00000538548 LZTFL1Q9NQ48 299 aa21.24■□□□□ 0.99
SFSWAP-207ENST00000538548 HOOK1Q9UJC3 728 aaKnown RBP21.24■□□□□ 0.99
SFSWAP-207ENST00000538548 KCNH3Q9ULD8 1083 aa21.24■□□□□ 0.99
SFSWAP-207ENST00000538548 CCDC9Q9Y3X0 531 aaKnown RBP21.24■□□□□ 0.99
SFSWAP-207ENST00000538548 ADGRG1Q9Y653 693 aa21.24■□□□□ 0.99
SFSWAP-207ENST00000538548 TUBBP07437 444 aa21.23■□□□□ 0.99
SFSWAP-207ENST00000538548 TAF7LQ5H9L4 462 aa21.23■□□□□ 0.99
SFSWAP-207ENST00000538548 XAGE3Q8WTP9 111 aa21.23■□□□□ 0.99
SFSWAP-207ENST00000538548 MAP3K14Q99558 947 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 139.9 ms