RNA–Protein interactions for RNA: ENST00000538485.6

EFCAB11-202, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 2 BASIC

Gene EFCAB11, Length 1,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-202ENST00000538485 DACT2Q5SW24 774 aa23.2■■□□□ 1.3
EFCAB11-202ENST00000538485 LARGE2Q8N3Y3 721 aa23.2■■□□□ 1.3
EFCAB11-202ENST00000538485 CYP46A1Q9Y6A2 500 aa23.2■■□□□ 1.3
EFCAB11-202ENST00000538485 USP17L3A6NCW0 530 aa23.19■■□□□ 1.3
EFCAB11-202ENST00000538485 USP17L4A6NCW7 530 aa23.19■■□□□ 1.3
EFCAB11-202ENST00000538485 E7EWF7 191 aa23.19■■□□□ 1.3
EFCAB11-202ENST00000538485 F8W031 263 aaPredicted RBP23.19■■□□□ 1.3
EFCAB11-202ENST00000538485 USP17L1Q7RTZ2 530 aa23.19■■□□□ 1.3
EFCAB11-202ENST00000538485 FAM163AQ96GL9 167 aaPredicted RBP23.19■■□□□ 1.3
EFCAB11-202ENST00000538485 NEK1Q96PY6 1258 aa23.19■■□□□ 1.3
EFCAB11-202ENST00000538485 NACAP1Q9BZK3 213 aa23.19■■□□□ 1.3
EFCAB11-202ENST00000538485 VPS33BQ9H267 617 aa23.19■■□□□ 1.3
EFCAB11-202ENST00000538485 BLOC1S2Q6QNY1 142 aa23.19■■□□□ 1.3
EFCAB11-202ENST00000538485 IL27Q8NEV9 243 aa23.19■■□□□ 1.3
EFCAB11-202ENST00000538485 FHDC1Q9C0D6 1143 aaPredicted RBP23.19■■□□□ 1.3
EFCAB11-202ENST00000538485 NBPF3Q9H094 633 aa23.19■■□□□ 1.3
EFCAB11-202ENST00000538485 TAOK3Q9H2K8 898 aa23.19■■□□□ 1.3
EFCAB11-202ENST00000538485 TTF2Q9UNY4 1162 aaKnown RBP23.19■■□□□ 1.3
EFCAB11-202ENST00000538485 NFKBIEO00221 500 aa23.18■■□□□ 1.3
EFCAB11-202ENST00000538485 TDO2P48775 406 aa23.18■■□□□ 1.3
EFCAB11-202ENST00000538485 PPP4CP60510 307 aa23.18■■□□□ 1.3
EFCAB11-202ENST00000538485 GAKO14976 1311 aa23.18■■□□□ 1.3
EFCAB11-202ENST00000538485 IARSP41252 1262 aaKnown RBP23.17■■□□□ 1.3
EFCAB11-202ENST00000538485 FKBP1AP62942 108 aaKnown RBP23.17■■□□□ 1.3
EFCAB11-202ENST00000538485 SLF2Q8IX21 1173 aa23.17■■□□□ 1.3
EFCAB11-202ENST00000538485 LAMA4Q16363 1823 aa23.17■■□□□ 1.3
EFCAB11-202ENST00000538485 GPR75-ASB3A0A0A6YYF3 556 aa23.17■■□□□ 1.3
EFCAB11-202ENST00000538485 BAG3O95817 575 aa23.17■■□□□ 1.3
EFCAB11-202ENST00000538485 RPS6KB1P23443 525 aa23.17■■□□□ 1.3
EFCAB11-202ENST00000538485 CRNKL1Q9BZJ0 848 aaKnown RBP23.17■■□□□ 1.3
EFCAB11-202ENST00000538485 PDRG1Q9NUG6 133 aa23.17■■□□□ 1.3
EFCAB11-202ENST00000538485 BAZ2AQ9UIF9 1905 aaKnown RBP23.16■■□□□ 1.3
EFCAB11-202ENST00000538485 BTDP43251 543 aa23.16■■□□□ 1.3
EFCAB11-202ENST00000538485 AK2P54819 239 aa23.16■■□□□ 1.3
EFCAB11-202ENST00000538485 SH3RF3Q8TEJ3 882 aaPredicted RBP23.16■■□□□ 1.3
EFCAB11-202ENST00000538485 TCEANC2Q96MN5 208 aa23.16■■□□□ 1.3
EFCAB11-202ENST00000538485 ARFGEF1Q9Y6D6 1849 aa23.15■■□□□ 1.3
EFCAB11-202ENST00000538485 MCM2P49736 904 aa23.15■■□□□ 1.3
EFCAB11-202ENST00000538485 NOL8Q76FK4 1167 aaKnown RBP23.15■■□□□ 1.3
EFCAB11-202ENST00000538485 TBC1D10CQ8IV04 446 aa23.15■■□□□ 1.3
EFCAB11-202ENST00000538485 SPRYD3Q8NCJ5 442 aa23.15■■□□□ 1.3
EFCAB11-202ENST00000538485 NOL10Q9BSC4 688 aaKnown RBP23.15■■□□□ 1.3
EFCAB11-202ENST00000538485 DAGLAQ9Y4D2 1042 aa23.15■■□□□ 1.3
EFCAB11-202ENST00000538485 SCNN1DP51172 638 aa23.15■■□□□ 1.3
EFCAB11-202ENST00000538485 KIAA0825Q8IV33 1275 aa23.15■■□□□ 1.3
EFCAB11-202ENST00000538485 DCP1AQ9NPI6 582 aaPredicted RBP23.15■■□□□ 1.3
EFCAB11-202ENST00000538485 PSME4Q14997 1843 aa23.15■■□□□ 1.3
EFCAB11-202ENST00000538485 GIMAP6Q6P9H5 292 aa23.14■■□□□ 1.29
EFCAB11-202ENST00000538485 ATP8A2Q9NTI2 1148 aa23.14■■□□□ 1.29
EFCAB11-202ENST00000538485 HMGB1P09429 215 aaKnown RBP23.13■■□□□ 1.29
EFCAB11-202ENST00000538485 RAD17O75943 681 aa23.13■■□□□ 1.29
EFCAB11-202ENST00000538485 CTDSPL2Q05D32 466 aa23.13■■□□□ 1.29
EFCAB11-202ENST00000538485 NIM1KQ8IY84 436 aa23.13■■□□□ 1.29
EFCAB11-202ENST00000538485 TMX3Q96JJ7 454 aa23.13■■□□□ 1.29
EFCAB11-202ENST00000538485 LARP6Q9BRS8 491 aaKnown RBP23.13■■□□□ 1.29
EFCAB11-202ENST00000538485 ZNRF3Q9ULT6 936 aa23.13■■□□□ 1.29
EFCAB11-202ENST00000538485 RHBDL3P58872 404 aa23.12■■□□□ 1.29
EFCAB11-202ENST00000538485 DHX32Q7L7V1 743 aaKnown RBP23.12■■□□□ 1.29
EFCAB11-202ENST00000538485 CERS3Q8IU89 383 aa23.12■■□□□ 1.29
EFCAB11-202ENST00000538485 MKRN1Q9UHC7 482 aaKnown RBP23.12■■□□□ 1.29
EFCAB11-202ENST00000538485 ADAMTSL1Q8N6G6 1762 aa23.11■■□□□ 1.29
EFCAB11-202ENST00000538485 SMIM22K7EJ46 135 aa23.11■■□□□ 1.29
EFCAB11-202ENST00000538485 PPARAQ07869 468 aa23.11■■□□□ 1.29
EFCAB11-202ENST00000538485 CTR9Q6PD62 1173 aa23.11■■□□□ 1.29
EFCAB11-202ENST00000538485 HHIPL2Q6UWX4 724 aa23.11■■□□□ 1.29
EFCAB11-202ENST00000538485 TEKT1Q969V4 418 aa23.11■■□□□ 1.29
EFCAB11-202ENST00000538485 SYT17Q9BSW7 474 aa23.11■■□□□ 1.29
EFCAB11-202ENST00000538485 INCENPQ9NQS7 918 aa23.11■■□□□ 1.29
EFCAB11-202ENST00000538485 TACC3Q9Y6A5 838 aa23.11■■□□□ 1.29
EFCAB11-202ENST00000538485 LTBP3Q9NS15 1303 aa23.11■■□□□ 1.29
EFCAB11-202ENST00000538485 MINDY4BA8MYZ0 360 aa23.11■■□□□ 1.29
EFCAB11-202ENST00000538485 USP17L12C9JPN9 530 aa23.11■■□□□ 1.29
EFCAB11-202ENST00000538485 USP17L21D6R901 530 aa23.11■■□□□ 1.29
EFCAB11-202ENST00000538485 PSMD14O00487 310 aa23.11■■□□□ 1.29
EFCAB11-202ENST00000538485 USP5P45974 858 aa23.11■■□□□ 1.29
EFCAB11-202ENST00000538485 EXOSC10Q01780 885 aaKnown RBP23.11■■□□□ 1.29
EFCAB11-202ENST00000538485 RASSF7Q02833 373 aa23.11■■□□□ 1.29
EFCAB11-202ENST00000538485 NCOA7Q8NI08 942 aa23.11■■□□□ 1.29
EFCAB11-202ENST00000538485 TGFBRAP1Q8WUH2 860 aa23.11■■□□□ 1.29
EFCAB11-202ENST00000538485 ALDH8A1Q9H2A2 487 aaPredicted RBP23.11■■□□□ 1.29
EFCAB11-202ENST00000538485 CDK5RAP2Q96SN8 1893 aa23.11■■□□□ 1.29
EFCAB11-202ENST00000538485 CYP2D7A0A087X1C5 515 aa23.1■■□□□ 1.29
EFCAB11-202ENST00000538485 VIL1P09327 827 aaKnown RBP23.1■■□□□ 1.29
EFCAB11-202ENST00000538485 PLCG2P16885 1265 aa23.1■■□□□ 1.29
EFCAB11-202ENST00000538485 NKX2-3Q8TAU0 364 aa23.1■■□□□ 1.29
EFCAB11-202ENST00000538485 MRIQ9BWK5 157 aa23.1■■□□□ 1.29
EFCAB11-202ENST00000538485 TIAM2Q8IVF5 1701 aa23.09■■□□□ 1.29
EFCAB11-202ENST00000538485 CRKP46108 304 aa23.09■■□□□ 1.29
EFCAB11-202ENST00000538485 PRELPP51888 382 aa23.09■■□□□ 1.29
EFCAB11-202ENST00000538485 TOB2Q14106 344 aaPredicted RBP23.09■■□□□ 1.29
EFCAB11-202ENST00000538485 AKNAD1Q5T1N1 836 aa23.09■■□□□ 1.29
EFCAB11-202ENST00000538485 CHST3Q7LGC8 479 aa23.09■■□□□ 1.29
EFCAB11-202ENST00000538485 MB21D2Q8IYB1 491 aaPredicted RBP23.09■■□□□ 1.29
EFCAB11-202ENST00000538485 JDP2Q8WYK2 163 aa23.09■■□□□ 1.29
EFCAB11-202ENST00000538485 LRRC2Q9BYS8 371 aa23.09■■□□□ 1.29
EFCAB11-202ENST00000538485 SLKQ9H2G2 1235 aaPredicted RBP23.09■■□□□ 1.29
EFCAB11-202ENST00000538485 ANAPC4Q9UJX5 808 aa23.09■■□□□ 1.29
EFCAB11-202ENST00000538485 LIMCH1Q9UPQ0 1083 aa23.09■■□□□ 1.29
EFCAB11-202ENST00000538485 NEDD4P46934 1319 aa23.09■■□□□ 1.29
EFCAB11-202ENST00000538485 TRDNQ13061 729 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms