RNA–Protein interactions for RNA: ENST00000538261.7

CLDN7-203, Transcript of claudin 7, humanhuman

TSL 5 BASIC

Gene CLDN7, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-203ENST00000538261 GRIK5Q16478 980 aa20.6■□□□□ 0.89
CLDN7-203ENST00000538261 SPTY2D1Q68D10 685 aaPredicted RBP20.6■□□□□ 0.89
CLDN7-203ENST00000538261 IFNL3Q8IZI9 196 aa20.6■□□□□ 0.89
CLDN7-203ENST00000538261 LARGE1O95461 756 aa20.59■□□□□ 0.89
CLDN7-203ENST00000538261 APPP05067 770 aa20.59■□□□□ 0.89
CLDN7-203ENST00000538261 HMGB1P09429 215 aaKnown RBP20.59■□□□□ 0.89
CLDN7-203ENST00000538261 LARP6Q9BRS8 491 aaKnown RBP20.59■□□□□ 0.89
CLDN7-203ENST00000538261 COA1Q9GZY4 146 aa20.59■□□□□ 0.89
CLDN7-203ENST00000538261 TMX4Q9H1E5 349 aaPredicted RBP20.59■□□□□ 0.89
CLDN7-203ENST00000538261 SLC4A4Q9Y6R1 1079 aa20.59■□□□□ 0.89
CLDN7-203ENST00000538261 ZNF213O14771 459 aa20.59■□□□□ 0.89
CLDN7-203ENST00000538261 ZBTB7AO95365 584 aa20.59■□□□□ 0.89
CLDN7-203ENST00000538261 MCTP1Q6DN14 999 aa20.59■□□□□ 0.89
CLDN7-203ENST00000538261 UPF1Q92900 1129 aaKnown RBP eCLIP20.59■□□□□ 0.89
CLDN7-203ENST00000538261 INTS4Q96HW7 963 aaKnown RBP20.59■□□□□ 0.89
CLDN7-203ENST00000538261 FAM205AQ6ZU69 1335 aa20.58■□□□□ 0.89
CLDN7-203ENST00000538261 RIMBP2O15034 1052 aa20.58■□□□□ 0.88
CLDN7-203ENST00000538261 LDHBP07195 334 aaKnown RBP20.58■□□□□ 0.88
CLDN7-203ENST00000538261 DYNLL1P63167 89 aaKnown RBP20.58■□□□□ 0.88
CLDN7-203ENST00000538261 ZSCAN23Q3MJ62 389 aa20.58■□□□□ 0.88
CLDN7-203ENST00000538261 EXOSC10Q01780 885 aaKnown RBP20.57■□□□□ 0.88
CLDN7-203ENST00000538261 DHX32Q7L7V1 743 aaKnown RBP20.57■□□□□ 0.88
CLDN7-203ENST00000538261 DZIP1Q86YF9 867 aaKnown RBP20.57■□□□□ 0.88
CLDN7-203ENST00000538261 TBC1D10CQ8IV04 446 aa20.57■□□□□ 0.88
CLDN7-203ENST00000538261 RTFDC1Q9BY42 306 aaPredicted RBP20.57■□□□□ 0.88
CLDN7-203ENST00000538261 ZC3H12CQ9C0D7 883 aaKnown RBP20.57■□□□□ 0.88
CLDN7-203ENST00000538261 NAPBQ9H115 298 aa20.57■□□□□ 0.88
CLDN7-203ENST00000538261 TPCN1Q9ULQ1 816 aa20.57■□□□□ 0.88
CLDN7-203ENST00000538261 ANKRD1Q15327 319 aa20.57■□□□□ 0.88
CLDN7-203ENST00000538261 PDLIM2Q96JY6 352 aa20.57■□□□□ 0.88
CLDN7-203ENST00000538261 MTFR1LQ9H019 292 aa20.57■□□□□ 0.88
CLDN7-203ENST00000538261 ZNF646O15015 1829 aaPredicted RBP20.56■□□□□ 0.88
CLDN7-203ENST00000538261 KCNA3P22001 575 aa20.56■□□□□ 0.88
CLDN7-203ENST00000538261 SDR42E1Q8WUS8 393 aa20.56■□□□□ 0.88
CLDN7-203ENST00000538261 PDCL3Q9H2J4 239 aa20.56■□□□□ 0.88
CLDN7-203ENST00000538261 MYH2Q9UKX2 1941 aa20.56■□□□□ 0.88
CLDN7-203ENST00000538261 ST3GAL1Q11201 340 aa20.55■□□□□ 0.88
CLDN7-203ENST00000538261 ME3Q16798 604 aa20.55■□□□□ 0.88
CLDN7-203ENST00000538261 MB21D2Q8IYB1 491 aaPredicted RBP20.55■□□□□ 0.88
CLDN7-203ENST00000538261 ZSCAN31Q96LW9 406 aaPredicted RBP20.55■□□□□ 0.88
CLDN7-203ENST00000538261 EYA3Q99504 573 aa20.55■□□□□ 0.88
CLDN7-203ENST00000538261 AGXT2Q9BYV1 514 aa20.55■□□□□ 0.88
CLDN7-203ENST00000538261 NACAP1Q9BZK3 213 aa20.55■□□□□ 0.88
CLDN7-203ENST00000538261 MFSD14BQ5SR56 506 aa20.55■□□□□ 0.88
CLDN7-203ENST00000538261 Q6ZUG5 572 aa20.55■□□□□ 0.88
CLDN7-203ENST00000538261 TBC1D22AQ8WUA7 517 aa20.55■□□□□ 0.88
CLDN7-203ENST00000538261 SH2B1Q9NRF2 756 aaPredicted RBP20.55■□□□□ 0.88
CLDN7-203ENST00000538261 AATFQ9NY61 560 aaKnown RBP eCLIP20.55■□□□□ 0.88
CLDN7-203ENST00000538261 BAZ2AQ9UIF9 1905 aaKnown RBP20.54■□□□□ 0.88
CLDN7-203ENST00000538261 DPEP1P16444 411 aa20.54■□□□□ 0.88
CLDN7-203ENST00000538261 TDO2P48775 406 aa20.54■□□□□ 0.88
CLDN7-203ENST00000538261 R3HDM1Q15032 1099 aaKnown RBP20.54■□□□□ 0.88
CLDN7-203ENST00000538261 DIXDC1Q155Q3 683 aa20.54■□□□□ 0.88
CLDN7-203ENST00000538261 CC2D2BQ6DHV5 1058 aa20.54■□□□□ 0.88
CLDN7-203ENST00000538261 CAVIN1Q6NZI2 390 aaKnown RBP20.54■□□□□ 0.88
CLDN7-203ENST00000538261 ZNF219Q9P2Y4 722 aaPredicted RBP20.54■□□□□ 0.88
CLDN7-203ENST00000538261 ZNF500O60304 480 aaPredicted RBP20.53■□□□□ 0.88
CLDN7-203ENST00000538261 MCM5P33992 734 aa20.53■□□□□ 0.88
CLDN7-203ENST00000538261 LRRC2Q9BYS8 371 aa20.53■□□□□ 0.88
CLDN7-203ENST00000538261 NOL7Q9UMY1 257 aaKnown RBP20.53■□□□□ 0.88
CLDN7-203ENST00000538261 ATF5Q9Y2D1 282 aaPredicted RBP20.53■□□□□ 0.88
CLDN7-203ENST00000538261 LAMB1P07942 1786 aa20.53■□□□□ 0.88
CLDN7-203ENST00000538261 GTF2IP78347 998 aa20.53■□□□□ 0.88
CLDN7-203ENST00000538261 DOK7Q18PE1 504 aa20.53■□□□□ 0.88
CLDN7-203ENST00000538261 FBXL16Q8N461 479 aa20.53■□□□□ 0.88
CLDN7-203ENST00000538261 TTLL6Q8N841 843 aa20.53■□□□□ 0.88
CLDN7-203ENST00000538261 NCOA7Q8NI08 942 aa20.53■□□□□ 0.88
CLDN7-203ENST00000538261 NKX2-3Q8TAU0 364 aa20.53■□□□□ 0.88
CLDN7-203ENST00000538261 BRCA1P38398 1863 aaKnown RBP20.52■□□□□ 0.88
CLDN7-203ENST00000538261 SCN9AQ15858 1988 aa20.52■□□□□ 0.88
CLDN7-203ENST00000538261 GSTO1P78417 241 aa20.52■□□□□ 0.88
CLDN7-203ENST00000538261 TACC3Q9Y6A5 838 aa20.52■□□□□ 0.88
CLDN7-203ENST00000538261 MROH7-TTC4A0A0A0MT08 1334 aa20.52■□□□□ 0.87
CLDN7-203ENST00000538261 NEDD4P46934 1319 aa20.52■□□□□ 0.87
CLDN7-203ENST00000538261 NCLP19338 710 aaKnown RBP20.51■□□□□ 0.87
CLDN7-203ENST00000538261 ANTXR2P58335 489 aa20.51■□□□□ 0.87
CLDN7-203ENST00000538261 GIMAP6Q6P9H5 292 aa20.51■□□□□ 0.87
CLDN7-203ENST00000538261 CDK5RAP2Q96SN8 1893 aa20.51■□□□□ 0.87
CLDN7-203ENST00000538261 WDR19Q8NEZ3 1342 aa20.51■□□□□ 0.87
CLDN7-203ENST00000538261 C21orf2O43822 256 aa20.51■□□□□ 0.87
CLDN7-203ENST00000538261 CHST3Q7LGC8 479 aa20.51■□□□□ 0.87
CLDN7-203ENST00000538261 RALYLQ86SE5 291 aaKnown RBP20.51■□□□□ 0.87
CLDN7-203ENST00000538261 BRF1Q92994 677 aa20.51■□□□□ 0.87
CLDN7-203ENST00000538261 SGIP1Q9BQI5 828 aa20.51■□□□□ 0.87
CLDN7-203ENST00000538261 POLD1P28340 1107 aa20.5■□□□□ 0.87
CLDN7-203ENST00000538261 PPP4CP60510 307 aa20.5■□□□□ 0.87
CLDN7-203ENST00000538261 CTDSPL2Q05D32 466 aa20.5■□□□□ 0.87
CLDN7-203ENST00000538261 CCDC83Q8IWF9 413 aa20.5■□□□□ 0.87
CLDN7-203ENST00000538261 CERS5Q8N5B7 392 aa20.5■□□□□ 0.87
CLDN7-203ENST00000538261 STAG1Q8WVM7 1258 aa20.5■□□□□ 0.87
CLDN7-203ENST00000538261 CRNKL1Q9BZJ0 848 aaKnown RBP20.5■□□□□ 0.87
CLDN7-203ENST00000538261 RBSNQ9H1K0 784 aa20.5■□□□□ 0.87
CLDN7-203ENST00000538261 DBNDD1Q9H9R9 158 aa20.5■□□□□ 0.87
CLDN7-203ENST00000538261 PPARAQ07869 468 aa20.49■□□□□ 0.87
CLDN7-203ENST00000538261 PKP1Q13835 747 aa20.49■□□□□ 0.87
CLDN7-203ENST00000538261 PODNQ7Z5L7 613 aa20.49■□□□□ 0.87
CLDN7-203ENST00000538261 NECAB1Q8N987 351 aa20.49■□□□□ 0.87
CLDN7-203ENST00000538261 ANAPC4Q9UJX5 808 aa20.49■□□□□ 0.87
CLDN7-203ENST00000538261 SUGT1Q9Y2Z0 365 aa20.49■□□□□ 0.87
CLDN7-203ENST00000538261 GAKO14976 1311 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms