RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 ATP8A2Q9NTI2 1148 aa4.27□□□□□ -1.73
PTPN22-211ENST00000538253 STAP2Q9UGK3 403 aa4.27□□□□□ -1.73
PTPN22-211ENST00000538253 HERC5Q9UII4 1024 aaKnown RBP4.27□□□□□ -1.73
PTPN22-211ENST00000538253 CSADQ9Y600 493 aa4.27□□□□□ -1.73
PTPN22-211ENST00000538253 AFDNP55196 1824 aaKnown RBP4.27□□□□□ -1.73
PTPN22-211ENST00000538253 SNED1Q8TER0 1413 aa4.27□□□□□ -1.73
PTPN22-211ENST00000538253 REC8O95072 547 aa4.27□□□□□ -1.73
PTPN22-211ENST00000538253 PSEN1P49768 467 aa4.27□□□□□ -1.73
PTPN22-211ENST00000538253 DACT2Q5SW24 774 aa4.27□□□□□ -1.73
PTPN22-211ENST00000538253 ATG9AQ7Z3C6 839 aa4.27□□□□□ -1.73
PTPN22-211ENST00000538253 MICALL2Q8IY33 904 aa4.27□□□□□ -1.73
PTPN22-211ENST00000538253 CCDC24Q8N4L8 307 aa4.27□□□□□ -1.73
PTPN22-211ENST00000538253 HAUS7Q99871 368 aa4.27□□□□□ -1.73
PTPN22-211ENST00000538253 FSD1Q9BTV5 496 aa4.27□□□□□ -1.73
PTPN22-211ENST00000538253 ZNF341Q9BYN7 854 aa4.27□□□□□ -1.73
PTPN22-211ENST00000538253 OSBPL3Q9H4L5 887 aa4.27□□□□□ -1.73
PTPN22-211ENST00000538253 ABCF2Q9UG63 623 aa4.27□□□□□ -1.73
PTPN22-211ENST00000538253 POLLQ9UGP5 575 aa4.27□□□□□ -1.73
PTPN22-211ENST00000538253 SYNPO2Q9UMS6 1093 aa4.27□□□□□ -1.73
PTPN22-211ENST00000538253 PSMD14O00487 310 aa4.26□□□□□ -1.73
PTPN22-211ENST00000538253 KDM4AO75164 1064 aa4.26□□□□□ -1.73
PTPN22-211ENST00000538253 COPB2P35606 906 aa4.26□□□□□ -1.73
PTPN22-211ENST00000538253 USP5P45974 858 aa4.26□□□□□ -1.73
PTPN22-211ENST00000538253 RASSF7Q02833 373 aa4.26□□□□□ -1.73
PTPN22-211ENST00000538253 SREBF2Q12772 1141 aa4.26□□□□□ -1.73
PTPN22-211ENST00000538253 EAPPQ56P03 285 aaPredicted RBP4.26□□□□□ -1.73
PTPN22-211ENST00000538253 EPHA10Q5JZY3 1008 aa4.26□□□□□ -1.73
PTPN22-211ENST00000538253 ZCCHC17Q9NP64 241 aaKnown RBP4.26□□□□□ -1.73
PTPN22-211ENST00000538253 MYOZ2Q9NPC6 264 aa4.26□□□□□ -1.73
PTPN22-211ENST00000538253 PAG1Q9NWQ8 432 aa4.26□□□□□ -1.73
PTPN22-211ENST00000538253 COL2A1P02458 1487 aaPredicted RBP4.26□□□□□ -1.73
PTPN22-211ENST00000538253 MAFGO15525 162 aa4.26□□□□□ -1.73
PTPN22-211ENST00000538253 RAD17O75943 681 aa4.26□□□□□ -1.73
PTPN22-211ENST00000538253 FDX1P10109 184 aa4.26□□□□□ -1.73
PTPN22-211ENST00000538253 CRKP46108 304 aa4.26□□□□□ -1.73
PTPN22-211ENST00000538253 NUCB1Q02818 461 aa4.26□□□□□ -1.73
PTPN22-211ENST00000538253 PDE4BQ07343 736 aa4.26□□□□□ -1.73
PTPN22-211ENST00000538253 TRDNQ13061 729 aa4.26□□□□□ -1.73
PTPN22-211ENST00000538253 TTLL12Q14166 644 aaPredicted RBP4.26□□□□□ -1.73
PTPN22-211ENST00000538253 KRT32Q14532 448 aa4.26□□□□□ -1.73
PTPN22-211ENST00000538253 SART3Q15020 963 aaKnown RBP4.26□□□□□ -1.73
PTPN22-211ENST00000538253 DOK7Q18PE1 504 aa4.26□□□□□ -1.73
PTPN22-211ENST00000538253 CFAP100Q494V2 611 aa4.26□□□□□ -1.73
PTPN22-211ENST00000538253 CRACR2BQ8N4Y2 399 aaPredicted RBP4.26□□□□□ -1.73
PTPN22-211ENST00000538253 VGLL2Q8N8G2 317 aa4.26□□□□□ -1.73
PTPN22-211ENST00000538253 KBTBD3Q8NAB2 608 aa4.26□□□□□ -1.73
PTPN22-211ENST00000538253 FAM151AQ8WW52 585 aa4.26□□□□□ -1.73
PTPN22-211ENST00000538253 APPBP2Q92624 585 aa4.26□□□□□ -1.73
PTPN22-211ENST00000538253 MAF1Q9H063 256 aa4.26□□□□□ -1.73
PTPN22-211ENST00000538253 DBNDD1Q9H9R9 158 aa4.26□□□□□ -1.73
PTPN22-211ENST00000538253 PICK1Q9NRD5 415 aa4.26□□□□□ -1.73
PTPN22-211ENST00000538253 ARPP21Q9UBL0 812 aaPredicted RBP4.26□□□□□ -1.73
PTPN22-211ENST00000538253 PGAP2Q9UHJ9 254 aa4.26□□□□□ -1.73
PTPN22-211ENST00000538253 MROH7-TTC4A0A0A0MT08 1334 aa4.26□□□□□ -1.73
PTPN22-211ENST00000538253 MAGEB6P1A0A0J9YX57 407 aa4.25□□□□□ -1.73
PTPN22-211ENST00000538253 TRIM6-TRIM34B2RNG4 842 aa4.25□□□□□ -1.73
PTPN22-211ENST00000538253 RNF113AO15541 343 aaKnown RBP4.25□□□□□ -1.73
PTPN22-211ENST00000538253 IDH1O75874 414 aaKnown RBP4.25□□□□□ -1.73
PTPN22-211ENST00000538253 CYP7A1P22680 504 aa4.25□□□□□ -1.73
PTPN22-211ENST00000538253 LRRC24Q50LG9 513 aa4.25□□□□□ -1.73
PTPN22-211ENST00000538253 TEX11Q8IYF3 940 aa4.25□□□□□ -1.73
PTPN22-211ENST00000538253 ZNF594Q96JF6 807 aaPredicted RBP4.25□□□□□ -1.73
PTPN22-211ENST00000538253 EXOC6BQ9Y2D4 811 aa4.25□□□□□ -1.73
PTPN22-211ENST00000538253 LRRC37AA6NMS7 1700 aa4.25□□□□□ -1.73
PTPN22-211ENST00000538253 TAF5LO75529 589 aa4.25□□□□□ -1.73
PTPN22-211ENST00000538253 POLR3DP05423 398 aaPredicted RBP4.25□□□□□ -1.73
PTPN22-211ENST00000538253 USP14P54578 494 aa4.25□□□□□ -1.73
PTPN22-211ENST00000538253 RCSD1Q6JBY9 416 aa4.25□□□□□ -1.73
PTPN22-211ENST00000538253 SMIM5Q71RC9 77 aa4.25□□□□□ -1.73
PTPN22-211ENST00000538253 KRT26Q7Z3Y9 468 aa4.25□□□□□ -1.73
PTPN22-211ENST00000538253 HELBQ8NG08 1087 aaPredicted RBP4.25□□□□□ -1.73
PTPN22-211ENST00000538253 JARID2Q92833 1246 aaPredicted RBP4.25□□□□□ -1.73
PTPN22-211ENST00000538253 KAZALD1Q96I82 304 aa4.25□□□□□ -1.73
PTPN22-211ENST00000538253 MTA3Q9BTC8 594 aa4.25□□□□□ -1.73
PTPN22-211ENST00000538253 OSBPL5Q9H0X9 879 aaPredicted RBP4.25□□□□□ -1.73
PTPN22-211ENST00000538253 CNNM2Q9H8M5 875 aa4.25□□□□□ -1.73
PTPN22-211ENST00000538253 PNMA3Q9UL41 463 aa4.25□□□□□ -1.73
PTPN22-211ENST00000538253 GAKO14976 1311 aa4.25□□□□□ -1.73
PTPN22-211ENST00000538253 SENP3-EIF4A1A0A087X0R7 540 aa4.25□□□□□ -1.73
PTPN22-211ENST00000538253 PNMA6EA0A0J9YXQ4 647 aa4.25□□□□□ -1.73
PTPN22-211ENST00000538253 MANSC4A6NHS7 340 aaPredicted RBP4.25□□□□□ -1.73
PTPN22-211ENST00000538253 TMEM88BA6NKF7 163 aa4.25□□□□□ -1.73
PTPN22-211ENST00000538253 RLBP1P12271 317 aa4.25□□□□□ -1.73
PTPN22-211ENST00000538253 SPDYE2Q495Y8 402 aa4.25□□□□□ -1.73
PTPN22-211ENST00000538253 C3orf67Q6ZVT6 689 aa4.25□□□□□ -1.73
PTPN22-211ENST00000538253 ZSCAN29Q8IWY8 852 aaPredicted RBP4.25□□□□□ -1.73
PTPN22-211ENST00000538253 IDI2Q9BXS1 227 aa4.25□□□□□ -1.73
PTPN22-211ENST00000538253 SH3BP1Q9Y3L3 701 aa4.25□□□□□ -1.73
PTPN22-211ENST00000538253 CTDP1Q9Y5B0 961 aaPredicted RBP4.25□□□□□ -1.73
PTPN22-211ENST00000538253 MYH3P11055 1940 aa4.25□□□□□ -1.73
PTPN22-211ENST00000538253 GPR75-ASB3A0A0A6YYF3 556 aa4.24□□□□□ -1.73
PTPN22-211ENST00000538253 SPDYE2BA6NHP3 402 aa4.24□□□□□ -1.73
PTPN22-211ENST00000538253 B4DLN1 442 aa4.24□□□□□ -1.73
PTPN22-211ENST00000538253 TBC1D12O60347 775 aa4.24□□□□□ -1.73
PTPN22-211ENST00000538253 CDC45O75419 566 aa4.24□□□□□ -1.73
PTPN22-211ENST00000538253 SPDYE6P0CI01 402 aa4.24□□□□□ -1.73
PTPN22-211ENST00000538253 ZKSCAN1P17029 563 aaPredicted RBP4.24□□□□□ -1.73
PTPN22-211ENST00000538253 GYG1P46976 350 aa4.24□□□□□ -1.73
PTPN22-211ENST00000538253 MRPL12P52815 198 aaKnown RBP4.24□□□□□ -1.73
PTPN22-211ENST00000538253 NOGQ13253 232 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms