RNA–Protein interactions for RNA: ENST00000537597.1

SRRM4-202, Transcript of serine/arginine repetitive matrix 4, humanhuman

TSL 4

Gene SRRM4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-202ENST00000537597 TCRBV5S4A2TA0A5A2 114 aa18.47■□□□□ 0.55
SRRM4-202ENST00000537597 MYO1BO43795 1136 aa18.47■□□□□ 0.55
SRRM4-202ENST00000537597 WDHD1O75717 1129 aaPredicted RBP18.47■□□□□ 0.55
SRRM4-202ENST00000537597 CELF2O95319 508 aaKnown RBP18.47■□□□□ 0.55
SRRM4-202ENST00000537597 MAP3K11Q16584 847 aa18.47■□□□□ 0.55
SRRM4-202ENST00000537597 PRAMEF18Q5VWM3 479 aa18.47■□□□□ 0.55
SRRM4-202ENST00000537597 EDC3Q96F86 508 aaKnown RBP18.47■□□□□ 0.55
SRRM4-202ENST00000537597 BOLA2Q9H3K6 86 aa18.47■□□□□ 0.55
SRRM4-202ENST00000537597 LDHCP07864 332 aa18.46■□□□□ 0.55
SRRM4-202ENST00000537597 NFIAQ12857 509 aa18.46■□□□□ 0.55
SRRM4-202ENST00000537597 CDAN1Q8IWY9 1227 aa18.46■□□□□ 0.55
SRRM4-202ENST00000537597 SLF2Q8IX21 1173 aa18.46■□□□□ 0.55
SRRM4-202ENST00000537597 LRP2BPQ9P2M1 347 aa18.46■□□□□ 0.55
SRRM4-202ENST00000537597 PCNTO95613 3336 aa18.46■□□□□ 0.55
SRRM4-202ENST00000537597 CACNB3P54284 484 aa18.45■□□□□ 0.54
SRRM4-202ENST00000537597 FKBP1BP68106 108 aa18.45■□□□□ 0.54
SRRM4-202ENST00000537597 GSTO1P78417 241 aa18.45■□□□□ 0.54
SRRM4-202ENST00000537597 MAP3K10Q02779 954 aa18.45■□□□□ 0.54
SRRM4-202ENST00000537597 TTF1Q15361 905 aaPredicted RBP18.45■□□□□ 0.54
SRRM4-202ENST00000537597 LDLRAD1Q5T700 205 aa18.45■□□□□ 0.54
SRRM4-202ENST00000537597 NBPF12Q5TAG4 269 aaPredicted RBP18.45■□□□□ 0.54
SRRM4-202ENST00000537597 DZIP1Q86YF9 867 aaKnown RBP18.45■□□□□ 0.54
SRRM4-202ENST00000537597 FAM151AQ8WW52 585 aa18.45■□□□□ 0.54
SRRM4-202ENST00000537597 OSBPL3Q9H4L5 887 aa18.45■□□□□ 0.54
SRRM4-202ENST00000537597 USP40Q9NVE5 1235 aa18.45■□□□□ 0.54
SRRM4-202ENST00000537597 RAI14Q9P0K7 980 aa18.45■□□□□ 0.54
SRRM4-202ENST00000537597 RPAP1Q9BWH6 1393 aaPredicted RBP18.44■□□□□ 0.54
SRRM4-202ENST00000537597 BTDP43251 543 aa18.44■□□□□ 0.54
SRRM4-202ENST00000537597 SH3BP5LQ7L8J4 393 aa18.44■□□□□ 0.54
SRRM4-202ENST00000537597 CHD1LQ86WJ1 897 aa18.44■□□□□ 0.54
SRRM4-202ENST00000537597 ZFPM1Q8IX07 1006 aa18.44■□□□□ 0.54
SRRM4-202ENST00000537597 GBA2Q9HCG7 927 aaPredicted RBP18.44■□□□□ 0.54
SRRM4-202ENST00000537597 DDX4Q9NQI0 724 aaKnown RBP18.44■□□□□ 0.54
SRRM4-202ENST00000537597 PAG1Q9NWQ8 432 aa18.44■□□□□ 0.54
SRRM4-202ENST00000537597 MAST2Q6P0Q8 1798 aa18.44■□□□□ 0.54
SRRM4-202ENST00000537597 ATRNL1Q5VV63 1379 aa18.43■□□□□ 0.54
SRRM4-202ENST00000537597 TCP10L2B9ZVM9 353 aa18.43■□□□□ 0.54
SRRM4-202ENST00000537597 GOLIM4O00461 696 aa18.43■□□□□ 0.54
SRRM4-202ENST00000537597 ENTPD3O75355 529 aa18.43■□□□□ 0.54
SRRM4-202ENST00000537597 PDE1AP54750 535 aa18.43■□□□□ 0.54
SRRM4-202ENST00000537597 TNFAIP1Q13829 316 aa18.43■□□□□ 0.54
SRRM4-202ENST00000537597 TSHZ3Q63HK5 1081 aa18.43■□□□□ 0.54
SRRM4-202ENST00000537597 NAA16Q6N069 864 aaPredicted RBP18.43■□□□□ 0.54
SRRM4-202ENST00000537597 JMYQ8N9B5 988 aa18.43■□□□□ 0.54
SRRM4-202ENST00000537597 KLRG1Q96E93 195 aa18.43■□□□□ 0.54
SRRM4-202ENST00000537597 RIOK1Q9BRS2 568 aaKnown RBP18.43■□□□□ 0.54
SRRM4-202ENST00000537597 TMEM39BQ9GZU3 492 aa18.43■□□□□ 0.54
SRRM4-202ENST00000537597 VEZTQ9HBM0 779 aa18.43■□□□□ 0.54
SRRM4-202ENST00000537597 USP2O75604 605 aaPredicted RBP18.42■□□□□ 0.54
SRRM4-202ENST00000537597 PDE6AP16499 860 aa18.42■□□□□ 0.54
SRRM4-202ENST00000537597 MX1P20591 662 aa18.42■□□□□ 0.54
SRRM4-202ENST00000537597 PLEKHM2Q8IWE5 1019 aa18.42■□□□□ 0.54
SRRM4-202ENST00000537597 PAPPA2Q9BXP8 1791 aa18.42■□□□□ 0.54
SRRM4-202ENST00000537597 UNCXA6NJT0 531 aa18.41■□□□□ 0.54
SRRM4-202ENST00000537597 GLRX3O76003 335 aaKnown RBP18.41■□□□□ 0.54
SRRM4-202ENST00000537597 ADD2P35612 726 aa18.41■□□□□ 0.54
SRRM4-202ENST00000537597 MAP3K12Q12852 859 aa18.41■□□□□ 0.54
SRRM4-202ENST00000537597 MOB2Q70IA6 237 aa18.41■□□□□ 0.54
SRRM4-202ENST00000537597 MAGEB6Q8N7X4 407 aa18.41■□□□□ 0.54
SRRM4-202ENST00000537597 MKRN1Q9UHC7 482 aaKnown RBP18.41■□□□□ 0.54
SRRM4-202ENST00000537597 COL2A1P02458 1487 aaPredicted RBP18.4■□□□□ 0.54
SRRM4-202ENST00000537597 FAM155AB1AL88 458 aaPredicted RBP18.4■□□□□ 0.54
SRRM4-202ENST00000537597 IDH1O75874 414 aaKnown RBP18.4■□□□□ 0.54
SRRM4-202ENST00000537597 CHGBP05060 677 aa18.4■□□□□ 0.54
SRRM4-202ENST00000537597 CYP7A1P22680 504 aa18.4■□□□□ 0.54
SRRM4-202ENST00000537597 PDE4AP27815 886 aa18.4■□□□□ 0.54
SRRM4-202ENST00000537597 UBE3CQ15386 1083 aa18.4■□□□□ 0.54
SRRM4-202ENST00000537597 DEFB115Q30KQ5 88 aa18.4■□□□□ 0.54
SRRM4-202ENST00000537597 SUPT20HL1Q3ZLR7 823 aa18.4■□□□□ 0.54
SRRM4-202ENST00000537597 C2orf69Q8N8R5 385 aa18.4■□□□□ 0.54
SRRM4-202ENST00000537597 KBTBD3Q8NAB2 608 aa18.4■□□□□ 0.54
SRRM4-202ENST00000537597 SH3RF3Q8TEJ3 882 aaPredicted RBP18.4■□□□□ 0.54
SRRM4-202ENST00000537597 DNAJC2Q99543 621 aaKnown RBP18.4■□□□□ 0.54
SRRM4-202ENST00000537597 LNPKQ9C0E8 428 aa18.4■□□□□ 0.54
SRRM4-202ENST00000537597 TNNI2P48788 182 aa18.39■□□□□ 0.53
SRRM4-202ENST00000537597 VEGFBP49765 207 aa18.39■□□□□ 0.53
SRRM4-202ENST00000537597 RGS3P49796 1198 aa18.39■□□□□ 0.53
SRRM4-202ENST00000537597 DYNLL1P63167 89 aaKnown RBP18.39■□□□□ 0.53
SRRM4-202ENST00000537597 SLFNL1Q499Z3 407 aa18.39■□□□□ 0.53
SRRM4-202ENST00000537597 SLC9C2Q5TAH2 1124 aa18.39■□□□□ 0.53
SRRM4-202ENST00000537597 METTL16Q86W50 562 aaKnown RBP18.39■□□□□ 0.53
SRRM4-202ENST00000537597 ZNF112Q9UJU3 913 aa18.39■□□□□ 0.53
SRRM4-202ENST00000537597 B4GALNT3Q6L9W6 998 aa18.38■□□□□ 0.53
SRRM4-202ENST00000537597 TICAM2Q86XR7 235 aa18.38■□□□□ 0.53
SRRM4-202ENST00000537597 ZNF408Q9H9D4 720 aa18.38■□□□□ 0.53
SRRM4-202ENST00000537597 AATFQ9NY61 560 aaKnown RBP eCLIP18.38■□□□□ 0.53
SRRM4-202ENST00000537597 ZNF532Q9HCE3 1301 aa18.38■□□□□ 0.53
SRRM4-202ENST00000537597 CDK5RAP2Q96SN8 1893 aa18.37■□□□□ 0.53
SRRM4-202ENST00000537597 DDTLA6NHG4 134 aaPredicted RBP18.37■□□□□ 0.53
SRRM4-202ENST00000537597 UBE2Q2LH0YL09 131 aa18.37■□□□□ 0.53
SRRM4-202ENST00000537597 ERC2O15083 957 aa18.37■□□□□ 0.53
SRRM4-202ENST00000537597 BAG3O95817 575 aa18.37■□□□□ 0.53
SRRM4-202ENST00000537597 HUNKP57058 714 aa18.37■□□□□ 0.53
SRRM4-202ENST00000537597 GPATCH3Q96I76 525 aa18.37■□□□□ 0.53
SRRM4-202ENST00000537597 TMOD2Q9NZR1 351 aa18.37■□□□□ 0.53
SRRM4-202ENST00000537597 FZD1Q9UP38 647 aa18.37■□□□□ 0.53
SRRM4-202ENST00000537597 THSD7BQ9C0I4 1608 aa18.37■□□□□ 0.53
SRRM4-202ENST00000537597 FOCADQ5VW36 1801 aa18.37■□□□□ 0.53
SRRM4-202ENST00000537597 PHF20L1A8MW92 1017 aa18.36■□□□□ 0.53
SRRM4-202ENST00000537597 TBC1D12O60347 775 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms