RNA–Protein interactions for RNA: ENST00000535180.5

VAMP1-204, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3 BASIC

Gene VAMP1, Length 747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-204ENST00000535180 HOOK2Q96ED9 719 aa13.84□□□□□ -0.19
VAMP1-204ENST00000535180 TTF2Q9UNY4 1162 aaKnown RBP13.84□□□□□ -0.19
VAMP1-204ENST00000535180 JAG2Q9Y219 1238 aa13.84□□□□□ -0.19
VAMP1-204ENST00000535180 PFASO15067 1338 aa13.84□□□□□ -0.19
VAMP1-204ENST00000535180 SYNGAP1Q96PV0 1343 aa13.84□□□□□ -0.19
VAMP1-204ENST00000535180 FOSL2P15408 326 aa13.83□□□□□ -0.2
VAMP1-204ENST00000535180 MPHOSPH8Q99549 860 aa13.83□□□□□ -0.2
VAMP1-204ENST00000535180 METTL22Q9BUU2 404 aaPredicted RBP13.83□□□□□ -0.2
VAMP1-204ENST00000535180 PHAXQ9H814 394 aaKnown RBP13.83□□□□□ -0.2
VAMP1-204ENST00000535180 TAOK2Q9UL54 1235 aa13.83□□□□□ -0.2
VAMP1-204ENST00000535180 OGDHLQ9ULD0 1010 aa13.83□□□□□ -0.2
VAMP1-204ENST00000535180 SNAP23O00161 211 aa13.82□□□□□ -0.2
VAMP1-204ENST00000535180 DCAF15Q66K64 600 aa13.82□□□□□ -0.2
VAMP1-204ENST00000535180 GPAT2Q6NUI2 795 aa13.82□□□□□ -0.2
VAMP1-204ENST00000535180 HMX1Q9NP08 348 aaPredicted RBP13.82□□□□□ -0.2
VAMP1-204ENST00000535180 LTBP2Q14767 1821 aa13.82□□□□□ -0.2
VAMP1-204ENST00000535180 PIEZO1Q92508 2521 aa13.82□□□□□ -0.2
VAMP1-204ENST00000535180 MAST2Q6P0Q8 1798 aa13.81□□□□□ -0.2
VAMP1-204ENST00000535180 HMGCRP04035 888 aa13.81□□□□□ -0.2
VAMP1-204ENST00000535180 LMOD3Q0VAK6 560 aa13.81□□□□□ -0.2
VAMP1-204ENST00000535180 MFSD14BQ5SR56 506 aa13.81□□□□□ -0.2
VAMP1-204ENST00000535180 COA7Q96BR5 231 aa13.81□□□□□ -0.2
VAMP1-204ENST00000535180 ZNF341Q9BYN7 854 aa13.81□□□□□ -0.2
VAMP1-204ENST00000535180 TTYH1Q9H313 450 aaPredicted RBP13.81□□□□□ -0.2
VAMP1-204ENST00000535180 ARIH1Q9Y4X5 557 aaPredicted RBP13.81□□□□□ -0.2
VAMP1-204ENST00000535180 CLSPNQ9HAW4 1339 aa13.81□□□□□ -0.2
VAMP1-204ENST00000535180 TAF5LO75529 589 aa13.8□□□□□ -0.2
VAMP1-204ENST00000535180 COL6A1P12109 1028 aa13.8□□□□□ -0.2
VAMP1-204ENST00000535180 ITGA6P23229 1130 aa13.8□□□□□ -0.2
VAMP1-204ENST00000535180 INPP5BP32019 993 aa13.8□□□□□ -0.2
VAMP1-204ENST00000535180 CRKP46108 304 aa13.8□□□□□ -0.2
VAMP1-204ENST00000535180 FAM83AQ86UY5 434 aa13.8□□□□□ -0.2
VAMP1-204ENST00000535180 LBHD1Q9BQE6 289 aaPredicted RBP13.8□□□□□ -0.2
VAMP1-204ENST00000535180 PLXNB2O15031 1838 aa13.8□□□□□ -0.2
VAMP1-204ENST00000535180 MYO9BQ13459 2157 aa13.79□□□□□ -0.2
VAMP1-204ENST00000535180 FRMPD3Q5JV73 1810 aa13.79□□□□□ -0.2
VAMP1-204ENST00000535180 CACNB3P54284 484 aa13.79□□□□□ -0.2
VAMP1-204ENST00000535180 LRRC26Q2I0M4 334 aa13.79□□□□□ -0.2
VAMP1-204ENST00000535180 DUSP27Q5VZP5 1158 aa13.79□□□□□ -0.2
VAMP1-204ENST00000535180 LAS1LQ9Y4W2 734 aaKnown RBP13.79□□□□□ -0.2
VAMP1-204ENST00000535180 CXCL11O14625 94 aa13.78□□□□□ -0.2
VAMP1-204ENST00000535180 TMPOP42166 694 aaKnown RBP13.78□□□□□ -0.2
VAMP1-204ENST00000535180 MIGA2Q7L4E1 593 aa13.78□□□□□ -0.2
VAMP1-204ENST00000535180 ZNF112Q9UJU3 913 aa13.78□□□□□ -0.2
VAMP1-204ENST00000535180 SLC45A1Q9Y2W3 748 aa13.78□□□□□ -0.2
VAMP1-204ENST00000535180 IGKV5-2P06315 115 aa13.77□□□□□ -0.21
VAMP1-204ENST00000535180 SMAD3P84022 425 aaKnown RBP13.77□□□□□ -0.21
VAMP1-204ENST00000535180 TRIM32Q13049 653 aa13.77□□□□□ -0.21
VAMP1-204ENST00000535180 FKBP1CQ5VVH2 108 aa13.77□□□□□ -0.21
VAMP1-204ENST00000535180 FASTKD5Q7L8L6 764 aaKnown RBP13.77□□□□□ -0.21
VAMP1-204ENST00000535180 PHIPQ8WWQ0 1821 aa13.77□□□□□ -0.21
VAMP1-204ENST00000535180 RPAP1Q9BWH6 1393 aaPredicted RBP13.77□□□□□ -0.21
VAMP1-204ENST00000535180 DDX58O95786 925 aaKnown RBP13.76□□□□□ -0.21
VAMP1-204ENST00000535180 HDLBPQ00341 1268 aaKnown RBP13.76□□□□□ -0.21
VAMP1-204ENST00000535180 NOL9Q5SY16 702 aaKnown RBP13.76□□□□□ -0.21
VAMP1-204ENST00000535180 USP38Q8NB14 1042 aa13.76□□□□□ -0.21
VAMP1-204ENST00000535180 TDRD7Q8NHU6 1098 aaKnown RBP13.76□□□□□ -0.21
VAMP1-204ENST00000535180 PLA2G12BQ9BX93 195 aa13.76□□□□□ -0.21
VAMP1-204ENST00000535180 TMOD2Q9NZR1 351 aa13.76□□□□□ -0.21
VAMP1-204ENST00000535180 TCF20Q9UGU0 1960 aaKnown RBP13.76□□□□□ -0.21
VAMP1-204ENST00000535180 A0A0G2JLL6 359 aaPredicted RBP13.75□□□□□ -0.21
VAMP1-204ENST00000535180 H7C1W4 665 aa13.75□□□□□ -0.21
VAMP1-204ENST00000535180 CSF1RP07333 972 aa13.75□□□□□ -0.21
VAMP1-204ENST00000535180 SHHQ15465 462 aa13.75□□□□□ -0.21
VAMP1-204ENST00000535180 PRRT2Q7Z6L0 340 aaPredicted RBP13.75□□□□□ -0.21
VAMP1-204ENST00000535180 ANKRD13CQ8N6S4 541 aa13.75□□□□□ -0.21
VAMP1-204ENST00000535180 SMCR8Q8TEV9 937 aaPredicted RBP13.75□□□□□ -0.21
VAMP1-204ENST00000535180 ATXN2LQ8WWM7 1075 aaKnown RBP13.75□□□□□ -0.21
VAMP1-204ENST00000535180 C1QTNF1Q9BXJ1 281 aa13.75□□□□□ -0.21
VAMP1-204ENST00000535180 MAP3K2Q9Y2U5 619 aa13.75□□□□□ -0.21
VAMP1-204ENST00000535180 MAP3K21Q5TCX8 1036 aa13.74□□□□□ -0.21
VAMP1-204ENST00000535180 UBE3BQ7Z3V4 1068 aa13.74□□□□□ -0.21
VAMP1-204ENST00000535180 ADAMTS19Q8TE59 1207 aa13.74□□□□□ -0.21
VAMP1-204ENST00000535180 SNX27Q96L92 541 aa13.74□□□□□ -0.21
VAMP1-204ENST00000535180 GJD2Q9UKL4 321 aa13.74□□□□□ -0.21
VAMP1-204ENST00000535180 ANKRD18BA2A2Z9 1011 aa13.73□□□□□ -0.21
VAMP1-204ENST00000535180 FAM110CQ1W6H9 321 aa13.73□□□□□ -0.21
VAMP1-204ENST00000535180 TEKT1Q969V4 418 aa13.73□□□□□ -0.21
VAMP1-204ENST00000535180 RLFQ13129 1914 aa13.72□□□□□ -0.21
VAMP1-204ENST00000535180 MUC6Q6W4X9 2439 aa13.72□□□□□ -0.21
VAMP1-204ENST00000535180 NEXNQ0ZGT2 675 aa13.72□□□□□ -0.21
VAMP1-204ENST00000535180 GRIK5Q16478 980 aa13.72□□□□□ -0.21
VAMP1-204ENST00000535180 CWF19L2Q2TBE0 894 aaKnown RBP13.72□□□□□ -0.21
VAMP1-204ENST00000535180 C9orf50Q5SZB4 431 aa13.72□□□□□ -0.21
VAMP1-204ENST00000535180 KSR2Q6VAB6 950 aa13.72□□□□□ -0.21
VAMP1-204ENST00000535180 GADL1Q6ZQY3 521 aa13.72□□□□□ -0.21
VAMP1-204ENST00000535180 TRIB2Q92519 343 aa13.72□□□□□ -0.21
VAMP1-204ENST00000535180 ZDHHC15Q96MV8 337 aa13.72□□□□□ -0.21
VAMP1-204ENST00000535180 ASB2Q96Q27 587 aa13.72□□□□□ -0.21
VAMP1-204ENST00000535180 UHRF1Q96T88 793 aaPredicted RBP13.72□□□□□ -0.21
VAMP1-204ENST00000535180 MRIQ9BWK5 157 aa13.72□□□□□ -0.21
VAMP1-204ENST00000535180 PRKAG2Q9UGJ0 569 aa13.72□□□□□ -0.21
VAMP1-204ENST00000535180 HCN4Q9Y3Q4 1203 aa13.72□□□□□ -0.21
VAMP1-204ENST00000535180 DOCK2Q92608 1830 aa13.71□□□□□ -0.21
VAMP1-204ENST00000535180 NEURL1BA8MQ27 555 aa13.71□□□□□ -0.21
VAMP1-204ENST00000535180 PRKAR2AP13861 404 aaKnown RBP13.71□□□□□ -0.21
VAMP1-204ENST00000535180 APOBEC3HQ6NTF7 200 aaKnown RBP13.71□□□□□ -0.21
VAMP1-204ENST00000535180 FAM151AQ8WW52 585 aa13.71□□□□□ -0.21
VAMP1-204ENST00000535180 AFG3L2Q9Y4W6 797 aa13.71□□□□□ -0.21
VAMP1-204ENST00000535180 ZHX2Q9Y6X8 837 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms