RNA–Protein interactions for RNA: ENST00000535147.5

DDB1-204, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,789 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-204ENST00000535147 ARHGAP29Q52LW3 1261 aa11.84□□□□□ -0.51
DDB1-204ENST00000535147 TICAM2Q86XR7 235 aa11.84□□□□□ -0.51
DDB1-204ENST00000535147 FOXP4Q8IVH2 680 aaPredicted RBP11.84□□□□□ -0.51
DDB1-204ENST00000535147 FAM177A1Q8N128 213 aaPredicted RBP11.84□□□□□ -0.51
DDB1-204ENST00000535147 TUBE1Q9UJT0 475 aa11.84□□□□□ -0.51
DDB1-204ENST00000535147 ANGEL1Q9UNK9 670 aaKnown RBP11.84□□□□□ -0.51
DDB1-204ENST00000535147 AKAP2Q9Y2D5 859 aa11.84□□□□□ -0.51
DDB1-204ENST00000535147 TJP1Q07157 1748 aa11.84□□□□□ -0.51
DDB1-204ENST00000535147 IKBKBO14920 756 aa11.84□□□□□ -0.51
DDB1-204ENST00000535147 ETF1P62495 437 aaKnown RBP11.84□□□□□ -0.51
DDB1-204ENST00000535147 TRDNQ13061 729 aa11.84□□□□□ -0.51
DDB1-204ENST00000535147 PTPAQ15257 358 aa11.84□□□□□ -0.51
DDB1-204ENST00000535147 LONRF3Q496Y0 759 aa11.84□□□□□ -0.51
DDB1-204ENST00000535147 SLC9C2Q5TAH2 1124 aa11.84□□□□□ -0.51
DDB1-204ENST00000535147 FANCLQ9NW38 375 aa11.84□□□□□ -0.51
DDB1-204ENST00000535147 FAM53CQ9NYF3 392 aa11.84□□□□□ -0.51
DDB1-204ENST00000535147 TMEM94Q12767 1356 aa11.84□□□□□ -0.51
DDB1-204ENST00000535147 NRDCO43847 1150 aa11.84□□□□□ -0.51
DDB1-204ENST00000535147 H2AFXP16104 143 aaPredicted RBP11.84□□□□□ -0.51
DDB1-204ENST00000535147 CLCN6P51797 869 aa11.84□□□□□ -0.51
DDB1-204ENST00000535147 MYL5Q02045 173 aa11.84□□□□□ -0.51
DDB1-204ENST00000535147 METTL16Q86W50 562 aaKnown RBP11.84□□□□□ -0.51
DDB1-204ENST00000535147 HPSEQ9Y251 543 aa11.84□□□□□ -0.51
DDB1-204ENST00000535147 KIF1AQ12756 1690 aa11.84□□□□□ -0.51
DDB1-204ENST00000535147 CPDO75976 1380 aa11.83□□□□□ -0.52
DDB1-204ENST00000535147 ZMYM6O95789 1325 aa11.83□□□□□ -0.52
DDB1-204ENST00000535147 IDH1O75874 414 aaKnown RBP11.83□□□□□ -0.52
DDB1-204ENST00000535147 PDE4BQ07343 736 aa11.83□□□□□ -0.52
DDB1-204ENST00000535147 TRIM65Q6PJ69 517 aa11.83□□□□□ -0.52
DDB1-204ENST00000535147 APOA5Q6Q788 366 aa11.83□□□□□ -0.52
DDB1-204ENST00000535147 STK11IPQ8N1F8 1099 aa11.83□□□□□ -0.52
DDB1-204ENST00000535147 PCDHA5Q9Y5H7 936 aa11.83□□□□□ -0.52
DDB1-204ENST00000535147 BMP6P22004 513 aa11.83□□□□□ -0.52
DDB1-204ENST00000535147 METTL24Q5JXM2 366 aa11.83□□□□□ -0.52
DDB1-204ENST00000535147 MAP3K14Q99558 947 aa11.83□□□□□ -0.52
DDB1-204ENST00000535147 ISCA1Q9BUE6 129 aa11.83□□□□□ -0.52
DDB1-204ENST00000535147 TMX1Q9H3N1 280 aa11.83□□□□□ -0.52
DDB1-204ENST00000535147 SH2B2O14492 632 aaPredicted RBP11.82□□□□□ -0.52
DDB1-204ENST00000535147 RANBP6O60518 1105 aaKnown RBP11.82□□□□□ -0.52
DDB1-204ENST00000535147 URI1O94763 535 aaPredicted RBP11.82□□□□□ -0.52
DDB1-204ENST00000535147 KCNJ6P48051 423 aa11.82□□□□□ -0.52
DDB1-204ENST00000535147 IFIT5Q13325 482 aaKnown RBP11.82□□□□□ -0.52
DDB1-204ENST00000535147 TCIRG1Q13488 830 aa11.82□□□□□ -0.52
DDB1-204ENST00000535147 ZCRB1Q8TBF4 217 aaKnown RBP11.82□□□□□ -0.52
DDB1-204ENST00000535147 TIGD1Q96MW7 591 aa11.82□□□□□ -0.52
DDB1-204ENST00000535147 EPC1Q9H2F5 836 aa11.82□□□□□ -0.52
DDB1-204ENST00000535147 ALS2Q96Q42 1657 aa11.82□□□□□ -0.52
DDB1-204ENST00000535147 TOP1P11387 765 aaKnown RBP11.82□□□□□ -0.52
DDB1-204ENST00000535147 ATF3P18847 181 aa11.82□□□□□ -0.52
DDB1-204ENST00000535147 NFXL1Q6ZNB6 911 aa11.82□□□□□ -0.52
DDB1-204ENST00000535147 REXO1L1PQ8IX06 675 aa11.82□□□□□ -0.52
DDB1-204ENST00000535147 PIH1D3Q9NQM4 214 aaKnown RBP11.82□□□□□ -0.52
DDB1-204ENST00000535147 INTS13Q9NVM9 706 aa11.82□□□□□ -0.52
DDB1-204ENST00000535147 FHOD1Q9Y613 1164 aa11.82□□□□□ -0.52
DDB1-204ENST00000535147 ERICH4A6NGS2 130 aa11.81□□□□□ -0.52
DDB1-204ENST00000535147 PPP6R2O75170 966 aa11.81□□□□□ -0.52
DDB1-204ENST00000535147 GPTP24298 496 aa11.81□□□□□ -0.52
DDB1-204ENST00000535147 ADD2P35612 726 aa11.81□□□□□ -0.52
DDB1-204ENST00000535147 GRIN1Q05586 938 aa11.81□□□□□ -0.52
DDB1-204ENST00000535147 RESP18Q5W5W9 173 aa11.81□□□□□ -0.52
DDB1-204ENST00000535147 LDHAL6AQ6ZMR3 332 aa11.81□□□□□ -0.52
DDB1-204ENST00000535147 VSTM4Q8IW00 320 aa11.81□□□□□ -0.52
DDB1-204ENST00000535147 CNNM3Q8NE01 707 aa11.81□□□□□ -0.52
DDB1-204ENST00000535147 KCNH3Q9ULD8 1083 aa11.81□□□□□ -0.52
DDB1-204ENST00000535147 COL18A1P39060 1754 aa11.81□□□□□ -0.52
DDB1-204ENST00000535147 SPEF2Q9C093 1822 aa11.81□□□□□ -0.52
DDB1-204ENST00000535147 LAMB4A4D0S4 1761 aa11.81□□□□□ -0.52
DDB1-204ENST00000535147 IARSP41252 1262 aaKnown RBP11.81□□□□□ -0.52
DDB1-204ENST00000535147 NTRK3Q16288 839 aa11.81□□□□□ -0.52
DDB1-204ENST00000535147 ZNF827Q17R98 1081 aa11.81□□□□□ -0.52
DDB1-204ENST00000535147 KRBA2Q6ZNG9 492 aa11.81□□□□□ -0.52
DDB1-204ENST00000535147 TOM1L2Q6ZVM7 507 aa11.81□□□□□ -0.52
DDB1-204ENST00000535147 JMYQ8N9B5 988 aa11.81□□□□□ -0.52
DDB1-204ENST00000535147 UBXN4Q92575 508 aa11.81□□□□□ -0.52
DDB1-204ENST00000535147 CARD6Q9BX69 1037 aa11.81□□□□□ -0.52
DDB1-204ENST00000535147 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.81□□□□□ -0.527e-7■■■□□ 16.1
DDB1-204ENST00000535147 FAM217BQ9NTX9 383 aaPredicted RBP11.81□□□□□ -0.52
DDB1-204ENST00000535147 NUP188Q5SRE5 1749 aa11.81□□□□□ -0.52
DDB1-204ENST00000535147 UBN2Q6ZU65 1347 aa11.8□□□□□ -0.52
DDB1-204ENST00000535147 ZBTB43O43298 467 aa11.8□□□□□ -0.52
DDB1-204ENST00000535147 CCDC102BQ68D86 513 aa11.8□□□□□ -0.52
DDB1-204ENST00000535147 OLFM4Q6UX06 510 aa11.8□□□□□ -0.52
DDB1-204ENST00000535147 CCDC82Q8N4S0 544 aa11.8□□□□□ -0.52
DDB1-204ENST00000535147 PDILTQ8N807 584 aa11.8□□□□□ -0.52
DDB1-204ENST00000535147 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.8□□□□□ -0.52
DDB1-204ENST00000535147 SLC26A6Q9BXS9 759 aa11.8□□□□□ -0.52
DDB1-204ENST00000535147 GREM2Q9H772 168 aa11.8□□□□□ -0.52
DDB1-204ENST00000535147 WWC3Q9ULE0 1092 aa11.8□□□□□ -0.52
DDB1-204ENST00000535147 ZNF532Q9HCE3 1301 aa11.8□□□□□ -0.52
DDB1-204ENST00000535147 GOLGA8AA7E2F4 631 aa11.8□□□□□ -0.52
DDB1-204ENST00000535147 CBFA2T2O43439 604 aa11.8□□□□□ -0.52
DDB1-204ENST00000535147 PNMA6AP0CW24 399 aaPredicted RBP11.8□□□□□ -0.52
DDB1-204ENST00000535147 GUCY1A2P33402 732 aa11.8□□□□□ -0.52
DDB1-204ENST00000535147 BMS1Q14692 1282 aaKnown RBP11.8□□□□□ -0.52
DDB1-204ENST00000535147 TMEM139Q8IV31 216 aa11.8□□□□□ -0.52
DDB1-204ENST00000535147 TRMT44Q8IYL2 757 aaKnown RBP11.8□□□□□ -0.52
DDB1-204ENST00000535147 MNS1Q8NEH6 495 aa11.8□□□□□ -0.52
DDB1-204ENST00000535147 IGDCC4Q8TDY8 1250 aa11.8□□□□□ -0.52
DDB1-204ENST00000535147 PHLPP2Q6ZVD8 1323 aa11.8□□□□□ -0.52
DDB1-204ENST00000535147 WDR19Q8NEZ3 1342 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms