RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 GPT2Q8TD30 523 aa15.73■□□□□ 0.11
BEST1-208ENST00000534553 SCAND2PQ9GZW5 306 aaPredicted RBP15.73■□□□□ 0.11
BEST1-208ENST00000534553 ELP1O95163 1332 aa15.72■□□□□ 0.11
BEST1-208ENST00000534553 MYH13Q9UKX3 1938 aa15.72■□□□□ 0.11
BEST1-208ENST00000534553 GOLGA8BA8MQT2 603 aa15.72■□□□□ 0.11
BEST1-208ENST00000534553 SH2B2O14492 632 aaPredicted RBP15.72■□□□□ 0.11
BEST1-208ENST00000534553 JAK2O60674 1132 aa15.72■□□□□ 0.11
BEST1-208ENST00000534553 RCAN1P53805 252 aa15.72■□□□□ 0.11
BEST1-208ENST00000534553 DDR1Q08345 913 aa15.72■□□□□ 0.11
BEST1-208ENST00000534553 CDC37L1Q7L3B6 337 aa15.72■□□□□ 0.11
BEST1-208ENST00000534553 CHST3Q7LGC8 479 aa15.72■□□□□ 0.11
BEST1-208ENST00000534553 SGMS1Q86VZ5 419 aa15.72■□□□□ 0.11
BEST1-208ENST00000534553 TMTC2Q8N394 836 aa15.72■□□□□ 0.11
BEST1-208ENST00000534553 MIGA1Q8NAN2 632 aa15.72■□□□□ 0.11
BEST1-208ENST00000534553 NAP1L2Q9ULW6 460 aaPredicted RBP15.72■□□□□ 0.11
BEST1-208ENST00000534553 EP400Q96L91 3159 aa15.72■□□□□ 0.11
BEST1-208ENST00000534553 CPLX1O14810 134 aa15.71■□□□□ 0.11
BEST1-208ENST00000534553 GSTO1P78417 241 aa15.71■□□□□ 0.11
BEST1-208ENST00000534553 ATL3Q6DD88 541 aa15.71■□□□□ 0.11
BEST1-208ENST00000534553 TDRD7Q8NHU6 1098 aaKnown RBP15.71■□□□□ 0.11
BEST1-208ENST00000534553 GGA1Q9UJY5 639 aa15.71■□□□□ 0.11
BEST1-208ENST00000534553 KLRK1P26718 216 aa15.71■□□□□ 0.1
BEST1-208ENST00000534553 CCT2P78371 535 aaKnown RBP15.71■□□□□ 0.1
BEST1-208ENST00000534553 CRNKL1Q9BZJ0 848 aaKnown RBP15.71■□□□□ 0.1
BEST1-208ENST00000534553 ATP8A2Q9NTI2 1148 aa15.71■□□□□ 0.1
BEST1-208ENST00000534553 CNPY2Q9Y2B0 182 aa15.71■□□□□ 0.1
BEST1-208ENST00000534553 NRXN2Q9P2S2 1712 aa15.7■□□□□ 0.1
BEST1-208ENST00000534553 ERICH2A1L162 156 aa15.7■□□□□ 0.1
BEST1-208ENST00000534553 B4E1Z4 1266 aa15.7■□□□□ 0.1
BEST1-208ENST00000534553 CTDNEP1O95476 244 aa15.7■□□□□ 0.1
BEST1-208ENST00000534553 MECOMQ03112 1051 aa15.7■□□□□ 0.1
BEST1-208ENST00000534553 DNM1Q05193 864 aaKnown RBP15.7■□□□□ 0.1
BEST1-208ENST00000534553 PPARAQ07869 468 aa15.7■□□□□ 0.1
BEST1-208ENST00000534553 ZSCAN23Q3MJ62 389 aa15.7■□□□□ 0.1
BEST1-208ENST00000534553 ADGRA1Q86SQ6 560 aa15.7■□□□□ 0.1
BEST1-208ENST00000534553 KIAA1551Q9HCM1 1747 aa15.7■□□□□ 0.1
BEST1-208ENST00000534553 NEDD4P46934 1319 aa15.7■□□□□ 0.1
BEST1-208ENST00000534553 NID2Q14112 1375 aa15.7■□□□□ 0.1
BEST1-208ENST00000534553 WTIPA6NIX2 430 aaPredicted RBP15.69■□□□□ 0.1
BEST1-208ENST00000534553 PRKAB2O43741 272 aa15.69■□□□□ 0.1
BEST1-208ENST00000534553 SYNE3Q6ZMZ3 975 aa15.69■□□□□ 0.1
BEST1-208ENST00000534553 DZIP1Q86YF9 867 aaKnown RBP15.69■□□□□ 0.1
BEST1-208ENST00000534553 ESR2Q92731 530 aa15.69■□□□□ 0.1
BEST1-208ENST00000534553 GRPEL1Q9HAV7 217 aa15.69■□□□□ 0.1
BEST1-208ENST00000534553 CFAP45Q9UL16 551 aa15.69■□□□□ 0.1
BEST1-208ENST00000534553 BRPF3Q9ULD4 1205 aa15.69■□□□□ 0.1
BEST1-208ENST00000534553 FIBPO43427 364 aa15.68■□□□□ 0.1
BEST1-208ENST00000534553 LETM1O95202 739 aaPredicted RBP15.68■□□□□ 0.1
BEST1-208ENST00000534553 PDE6BP35913 854 aa15.68■□□□□ 0.1
BEST1-208ENST00000534553 METAP2P50579 478 aaKnown RBP eCLIP15.68■□□□□ 0.1
BEST1-208ENST00000534553 ZNF827Q17R98 1081 aa15.68■□□□□ 0.1
BEST1-208ENST00000534553 TMEM67Q5HYA8 995 aa15.68■□□□□ 0.1
BEST1-208ENST00000534553 CYB5R4Q7L1T6 521 aa15.68■□□□□ 0.1
BEST1-208ENST00000534553 SP8Q8IXZ3 490 aa15.68■□□□□ 0.1
BEST1-208ENST00000534553 IGDCC4Q8TDY8 1250 aa15.68■□□□□ 0.1
BEST1-208ENST00000534553 DDX11Q96FC9 970 aa15.68■□□□□ 0.1
BEST1-208ENST00000534553 HPS5Q9UPZ3 1129 aa15.68■□□□□ 0.1
BEST1-208ENST00000534553 LRRC37AA6NMS7 1700 aa15.68■□□□□ 0.1
BEST1-208ENST00000534553 IFIT3O14879 490 aaKnown RBP15.68■□□□□ 0.1
BEST1-208ENST00000534553 ZBTB43O43298 467 aa15.68■□□□□ 0.1
BEST1-208ENST00000534553 KDM4AO75164 1064 aa15.68■□□□□ 0.1
BEST1-208ENST00000534553 UFL1O94874 794 aa15.68■□□□□ 0.1
BEST1-208ENST00000534553 LDHBP07195 334 aaKnown RBP15.68■□□□□ 0.1
BEST1-208ENST00000534553 LDHCP07864 332 aa15.68■□□□□ 0.1
BEST1-208ENST00000534553 SLC3A2P08195 630 aaKnown RBP15.68■□□□□ 0.1
BEST1-208ENST00000534553 GPSM2P81274 684 aa15.68■□□□□ 0.1
BEST1-208ENST00000534553 CHAF1AQ13111 956 aaPredicted RBP15.68■□□□□ 0.1
BEST1-208ENST00000534553 PPP2R5BQ15173 497 aa15.68■□□□□ 0.1
BEST1-208ENST00000534553 FOXD4L6Q3SYB3 417 aaPredicted RBP15.68■□□□□ 0.1
BEST1-208ENST00000534553 APOA5Q6Q788 366 aa15.68■□□□□ 0.1
BEST1-208ENST00000534553 FOXD4L3Q6VB84 417 aaPredicted RBP15.68■□□□□ 0.1
BEST1-208ENST00000534553 LY9Q9HBG7 655 aa15.68■□□□□ 0.1
BEST1-208ENST00000534553 ZSWIM5Q9P217 1185 aa15.68■□□□□ 0.1
BEST1-208ENST00000534553 ARPP21Q9UBL0 812 aaPredicted RBP15.68■□□□□ 0.1
BEST1-208ENST00000534553 NSFL1CQ9UNZ2 370 aaKnown RBP15.68■□□□□ 0.1
BEST1-208ENST00000534553 CHD4Q14839 1912 aa15.67■□□□□ 0.1
BEST1-208ENST00000534553 CCDC88AQ3V6T2 1871 aa15.67■□□□□ 0.1
BEST1-208ENST00000534553 CCDC69A6NI79 296 aa15.67■□□□□ 0.1
BEST1-208ENST00000534553 BAG3O95817 575 aa15.67■□□□□ 0.1
BEST1-208ENST00000534553 IL1R1P14778 569 aa15.67■□□□□ 0.1
BEST1-208ENST00000534553 NPR1P16066 1061 aa15.67■□□□□ 0.1
BEST1-208ENST00000534553 PRDX5P30044 214 aa15.67■□□□□ 0.1
BEST1-208ENST00000534553 ALDH1B1P30837 517 aa15.67■□□□□ 0.1
BEST1-208ENST00000534553 CTDSPL2Q05D32 466 aa15.67■□□□□ 0.1
BEST1-208ENST00000534553 RESTQ13127 1097 aa15.67■□□□□ 0.1
BEST1-208ENST00000534553 NFXL1Q6ZNB6 911 aa15.67■□□□□ 0.1
BEST1-208ENST00000534553 TXNRD3Q86VQ6 643 aa15.67■□□□□ 0.1
BEST1-208ENST00000534553 COL23A1Q86Y22 540 aaPredicted RBP15.67■□□□□ 0.1
BEST1-208ENST00000534553 TBC1D22AQ8WUA7 517 aa15.67■□□□□ 0.1
BEST1-208ENST00000534553 CHAMP1Q96JM3 812 aa15.67■□□□□ 0.1
BEST1-208ENST00000534553 GDPD2Q9HCC8 539 aa15.67■□□□□ 0.1
BEST1-208ENST00000534553 NCOA5Q9HCD5 579 aaKnown RBP15.67■□□□□ 0.1
BEST1-208ENST00000534553 PARP3Q9Y6F1 533 aa15.67■□□□□ 0.1
BEST1-208ENST00000534553 PPEF1O14829 653 aaPredicted RBP15.66■□□□□ 0.1
BEST1-208ENST00000534553 FGRP09769 529 aa15.66■□□□□ 0.1
BEST1-208ENST00000534553 SLF2Q8IX21 1173 aa15.66■□□□□ 0.1
BEST1-208ENST00000534553 ZNF384Q8TF68 577 aa15.66■□□□□ 0.1
BEST1-208ENST00000534553 SDR42E1Q8WUS8 393 aa15.66■□□□□ 0.1
BEST1-208ENST00000534553 NOL10Q9BSC4 688 aaKnown RBP15.66■□□□□ 0.1
BEST1-208ENST00000534553 TMX4Q9H1E5 349 aaPredicted RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms