RNA–Protein interactions for RNA: ENST00000534315.5

FOXRED1-218, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 1 (best)

Gene FOXRED1, Length 2,210 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-218ENST00000534315 FAM84BQ96KN1 310 aaPredicted RBP15.95■□□□□ 0.14
FOXRED1-218ENST00000534315 USP28Q96RU2 1077 aa15.95■□□□□ 0.14
FOXRED1-218ENST00000534315 NACAP1Q9BZK3 213 aa15.95■□□□□ 0.14
FOXRED1-218ENST00000534315 RAI14Q9P0K7 980 aa15.95■□□□□ 0.14
FOXRED1-218ENST00000534315 KDM4AO75164 1064 aa15.95■□□□□ 0.14
FOXRED1-218ENST00000534315 RXRAP19793 462 aa15.95■□□□□ 0.14
FOXRED1-218ENST00000534315 METAP2P50579 478 aaKnown RBP eCLIP15.95■□□□□ 0.142e-9■■■□□ 15.4
FOXRED1-218ENST00000534315 MAP3K11Q16584 847 aa15.95■□□□□ 0.14
FOXRED1-218ENST00000534315 AKNAD1Q5T1N1 836 aa15.95■□□□□ 0.14
FOXRED1-218ENST00000534315 LY9Q9HBG7 655 aa15.95■□□□□ 0.14
FOXRED1-218ENST00000534315 RCOR1Q9UKL0 485 aa15.95■□□□□ 0.14
FOXRED1-218ENST00000534315 CACNA1SQ13698 1873 aa15.95■□□□□ 0.14
FOXRED1-218ENST00000534315 NR1I2O75469 434 aa15.94■□□□□ 0.14
FOXRED1-218ENST00000534315 KLRK1P26718 216 aa15.94■□□□□ 0.14
FOXRED1-218ENST00000534315 TMEM67Q5HYA8 995 aa15.94■□□□□ 0.14
FOXRED1-218ENST00000534315 TPTE2Q6XPS3 522 aa15.94■□□□□ 0.14
FOXRED1-218ENST00000534315 ZNF396Q96N95 335 aaPredicted RBP15.94■□□□□ 0.14
FOXRED1-218ENST00000534315 DDX19AQ9NUU7 478 aaKnown RBP15.94■□□□□ 0.14
FOXRED1-218ENST00000534315 ZSWIM5Q9P217 1185 aa15.94■□□□□ 0.14
FOXRED1-218ENST00000534315 ATL3Q6DD88 541 aa15.94■□□□□ 0.14
FOXRED1-218ENST00000534315 MFSD6Q6ZSS7 791 aa15.94■□□□□ 0.14
FOXRED1-218ENST00000534315 MICU3Q86XE3 530 aa15.94■□□□□ 0.14
FOXRED1-218ENST00000534315 FBXO18Q8NFZ0 1043 aa15.94■□□□□ 0.14
FOXRED1-218ENST00000534315 TNMDQ9H2S6 317 aa15.94■□□□□ 0.14
FOXRED1-218ENST00000534315 CNNM2Q9H8M5 875 aa15.94■□□□□ 0.14
FOXRED1-218ENST00000534315 GJB4Q9NTQ9 266 aa15.94■□□□□ 0.14
FOXRED1-218ENST00000534315 CCDC192P0DO97 292 aa15.93■□□□□ 0.14
FOXRED1-218ENST00000534315 HS1BP3Q53T59 392 aa15.93■□□□□ 0.14
FOXRED1-218ENST00000534315 NFXL1Q6ZNB6 911 aa15.93■□□□□ 0.14
FOXRED1-218ENST00000534315 SGMS1Q86VZ5 419 aa15.93■□□□□ 0.14
FOXRED1-218ENST00000534315 ZSCAN30Q86W11 494 aa15.93■□□□□ 0.14
FOXRED1-218ENST00000534315 STAG1Q8WVM7 1258 aa15.93■□□□□ 0.14
FOXRED1-218ENST00000534315 KRT23Q9C075 422 aa15.93■□□□□ 0.14
FOXRED1-218ENST00000534315 CLSTN2Q9H4D0 955 aa15.93■□□□□ 0.14
FOXRED1-218ENST00000534315 AFF2P51816 1311 aa15.93■□□□□ 0.14
FOXRED1-218ENST00000534315 MAGEB6P1A0A0J9YX57 407 aa15.92■□□□□ 0.14
FOXRED1-218ENST00000534315 IFIT3O14879 490 aaKnown RBP15.92■□□□□ 0.14
FOXRED1-218ENST00000534315 CDC27P30260 824 aa15.92■□□□□ 0.14
FOXRED1-218ENST00000534315 RRP12Q5JTH9 1297 aaKnown RBP15.92■□□□□ 0.14
FOXRED1-218ENST00000534315 FBXO33Q7Z6M2 555 aa15.92■□□□□ 0.14
FOXRED1-218ENST00000534315 CCDC144CPQ8IYA2 1237 aa15.92■□□□□ 0.14
FOXRED1-218ENST00000534315 CKAP2LQ8IYA6 745 aa15.92■□□□□ 0.14
FOXRED1-218ENST00000534315 SDR42E1Q8WUS8 393 aa15.92■□□□□ 0.14
FOXRED1-218ENST00000534315 MYL10Q9BUA6 226 aa15.92■□□□□ 0.14
FOXRED1-218ENST00000534315 USP25Q9UHP3 1055 aa15.92■□□□□ 0.14
FOXRED1-218ENST00000534315 TNRC6CQ9HCJ0 1690 aaKnown RBP15.92■□□□□ 0.14
FOXRED1-218ENST00000534315 ZBTB43O43298 467 aa15.92■□□□□ 0.14
FOXRED1-218ENST00000534315 STK11IPQ8N1F8 1099 aa15.92■□□□□ 0.14
FOXRED1-218ENST00000534315 MYH13Q9UKX3 1938 aa15.91■□□□□ 0.14
FOXRED1-218ENST00000534315 RFC4P35249 363 aa15.91■□□□□ 0.14
FOXRED1-218ENST00000534315 LIFRP42702 1097 aa15.91■□□□□ 0.14
FOXRED1-218ENST00000534315 RIOK1Q9BRS2 568 aaKnown RBP15.91■□□□□ 0.14
FOXRED1-218ENST00000534315 TOMM22Q9NS69 142 aa15.91■□□□□ 0.14
FOXRED1-218ENST00000534315 GOLGA8AA7E2F4 631 aa15.91■□□□□ 0.14
FOXRED1-218ENST00000534315 CDKL5O76039 1030 aa15.91■□□□□ 0.14
FOXRED1-218ENST00000534315 TM4SF1P30408 202 aa15.91■□□□□ 0.14
FOXRED1-218ENST00000534315 TYRO3Q06418 890 aa15.91■□□□□ 0.14
FOXRED1-218ENST00000534315 TRAPPC3LQ5T215 181 aa15.91■□□□□ 0.14
FOXRED1-218ENST00000534315 RBM43Q6ZSC3 357 aaKnown RBP15.91■□□□□ 0.14
FOXRED1-218ENST00000534315 FAM196AQ6ZSG2 479 aa15.91■□□□□ 0.14
FOXRED1-218ENST00000534315 ZNF384Q8TF68 577 aa15.91■□□□□ 0.14
FOXRED1-218ENST00000534315 AIFM3Q96NN9 605 aa15.91■□□□□ 0.14
FOXRED1-218ENST00000534315 ECM29Q5VYK3 1845 aa15.91■□□□□ 0.14
FOXRED1-218ENST00000534315 NPHP1O15259 732 aa15.9■□□□□ 0.14
FOXRED1-218ENST00000534315 POLR3DP05423 398 aaPredicted RBP15.9■□□□□ 0.14
FOXRED1-218ENST00000534315 DYNLL1P63167 89 aaKnown RBP15.9■□□□□ 0.14
FOXRED1-218ENST00000534315 PPARAQ07869 468 aa15.9■□□□□ 0.14
FOXRED1-218ENST00000534315 SEPT12Q8IYM1 358 aa15.9■□□□□ 0.14
FOXRED1-218ENST00000534315 PHKBQ93100 1093 aa15.9■□□□□ 0.14
FOXRED1-218ENST00000534315 ANKRD2Q9GZV1 360 aa15.9■□□□□ 0.14
FOXRED1-218ENST00000534315 FAM217BQ9NTX9 383 aaPredicted RBP15.9■□□□□ 0.14
FOXRED1-218ENST00000534315 TFCP2L1Q9NZI6 479 aa15.9■□□□□ 0.14
FOXRED1-218ENST00000534315 KIF28PB7ZC32 967 aa15.9■□□□□ 0.14
FOXRED1-218ENST00000534315 SEMA3EO15041 775 aa15.9■□□□□ 0.14
FOXRED1-218ENST00000534315 NTRK3Q16288 839 aa15.9■□□□□ 0.14
FOXRED1-218ENST00000534315 CPLX2Q6PUV4 134 aaKnown RBP15.9■□□□□ 0.14
FOXRED1-218ENST00000534315 CCAR1Q8IX12 1150 aaKnown RBP15.9■□□□□ 0.14
FOXRED1-218ENST00000534315 ZKSCAN3Q9BRR0 538 aa15.9■□□□□ 0.14
FOXRED1-218ENST00000534315 ALG1Q9BT22 464 aa15.9■□□□□ 0.14
FOXRED1-218ENST00000534315 GOLPH3LQ9H4A5 285 aa15.9■□□□□ 0.14
FOXRED1-218ENST00000534315 SLC12A7Q9Y666 1083 aa15.9■□□□□ 0.14
FOXRED1-218ENST00000534315 MRVI1Q9Y6F6 885 aa15.9■□□□□ 0.14
FOXRED1-218ENST00000534315 CCDC69A6NI79 296 aa15.89■□□□□ 0.13
FOXRED1-218ENST00000534315 MINDY4BA8MYZ0 360 aa15.89■□□□□ 0.13
FOXRED1-218ENST00000534315 ONECUT3O60422 494 aaPredicted RBP15.89■□□□□ 0.13
FOXRED1-218ENST00000534315 ME1P48163 572 aa15.89■□□□□ 0.13
FOXRED1-218ENST00000534315 KIF23Q02241 960 aaPredicted RBP15.89■□□□□ 0.13
FOXRED1-218ENST00000534315 BRAPQ7Z569 592 aa15.89■□□□□ 0.13
FOXRED1-218ENST00000534315 LRRC4BQ9NT99 713 aa15.89■□□□□ 0.13
FOXRED1-218ENST00000534315 RTEL1Q9NZ71 1219 aa15.89■□□□□ 0.13
FOXRED1-218ENST00000534315 BAZ2AQ9UIF9 1905 aaKnown RBP15.89■□□□□ 0.13
FOXRED1-218ENST00000534315 SMIM22K7EJ46 135 aa15.88■□□□□ 0.13
FOXRED1-218ENST00000534315 RANBP6O60518 1105 aaKnown RBP15.88■□□□□ 0.13
FOXRED1-218ENST00000534315 HIBADHP31937 336 aaKnown RBP15.88■□□□□ 0.13
FOXRED1-218ENST00000534315 HSPA1LP34931 641 aa15.88■□□□□ 0.13
FOXRED1-218ENST00000534315 NFIXQ14938 502 aa15.88■□□□□ 0.13
FOXRED1-218ENST00000534315 RNF41Q9H4P4 317 aaPredicted RBP15.88■□□□□ 0.13
FOXRED1-218ENST00000534315 NOL7Q9UMY1 257 aaKnown RBP15.88■□□□□ 0.13
FOXRED1-218ENST00000534315 WTAPQ15007 396 aa15.88■□□□□ 0.13
FOXRED1-218ENST00000534315 MYSM1Q5VVJ2 828 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 133.2 ms