RNA–Protein interactions for RNA: ENST00000533931.1

CTTN-215, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-215ENST00000533931 SPDYE2Q495Y8 402 aa18.81■□□□□ 0.6
CTTN-215ENST00000533931 PRMT6Q96LA8 375 aaPredicted RBP18.81■□□□□ 0.6
CTTN-215ENST00000533931 KIF3CO14782 793 aa18.8■□□□□ 0.6
CTTN-215ENST00000533931 BTDP43251 543 aa18.8■□□□□ 0.6
CTTN-215ENST00000533931 NBPF9Q3BBW0 867 aa18.8■□□□□ 0.6
CTTN-215ENST00000533931 APOBEC3FQ8IUX4 373 aaKnown RBP18.8■□□□□ 0.6
CTTN-215ENST00000533931 RILPL2Q969X0 211 aa18.8■□□□□ 0.6
CTTN-215ENST00000533931 TNFAIP1Q13829 316 aa18.79■□□□□ 0.6
CTTN-215ENST00000533931 ZMYM1Q5SVZ6 1142 aa18.79■□□□□ 0.6
CTTN-215ENST00000533931 RBM26Q5T8P6 1007 aaKnown RBP18.79■□□□□ 0.6
CTTN-215ENST00000533931 ADGRA1Q86SQ6 560 aa18.79■□□□□ 0.6
CTTN-215ENST00000533931 RIOK1Q9BRS2 568 aaKnown RBP18.79■□□□□ 0.6
CTTN-215ENST00000533931 TMOD2Q9NZR1 351 aa18.79■□□□□ 0.6
CTTN-215ENST00000533931 RHBDL3P58872 404 aa18.78■□□□□ 0.6
CTTN-215ENST00000533931 CDC42EP5Q6NZY7 148 aa18.78■□□□□ 0.6
CTTN-215ENST00000533931 FAM83AQ86UY5 434 aa18.78■□□□□ 0.6
CTTN-215ENST00000533931 IDI2Q9BXS1 227 aa18.78■□□□□ 0.6
CTTN-215ENST00000533931 HELLSQ9NRZ9 838 aa18.78■□□□□ 0.6
CTTN-215ENST00000533931 ZNF70Q9UC06 446 aaPredicted RBP18.78■□□□□ 0.6
CTTN-215ENST00000533931 PPP2R3BQ9Y5P8 575 aa18.78■□□□□ 0.6
CTTN-215ENST00000533931 MYH7P12883 1935 aa18.78■□□□□ 0.6
CTTN-215ENST00000533931 ECM29Q5VYK3 1845 aa18.77■□□□□ 0.6
CTTN-215ENST00000533931 MYH2Q9UKX2 1941 aa18.77■□□□□ 0.6
CTTN-215ENST00000533931 MAGEB6P1A0A0J9YX57 407 aa18.77■□□□□ 0.6
CTTN-215ENST00000533931 EAPPQ56P03 285 aaPredicted RBP18.77■□□□□ 0.6
CTTN-215ENST00000533931 SKAP1Q86WV1 359 aa18.77■□□□□ 0.6
CTTN-215ENST00000533931 DCPSQ96C86 337 aaKnown RBP18.77■□□□□ 0.6
CTTN-215ENST00000533931 TDRD3Q9H7E2 651 aaKnown RBP18.77■□□□□ 0.6
CTTN-215ENST00000533931 USP40Q9NVE5 1235 aa18.77■□□□□ 0.6
CTTN-215ENST00000533931 AATFQ9NY61 560 aaKnown RBP eCLIP18.77■□□□□ 0.6
CTTN-215ENST00000533931 GGA3Q9NZ52 723 aa18.77■□□□□ 0.6
CTTN-215ENST00000533931 PCDHAC2Q9Y5I4 1007 aa18.77■□□□□ 0.6
CTTN-215ENST00000533931 COL2A1P02458 1487 aaPredicted RBP18.77■□□□□ 0.59
CTTN-215ENST00000533931 MYO5AQ9Y4I1 1855 aaKnown RBP18.76■□□□□ 0.59
CTTN-215ENST00000533931 ENTPD3O75355 529 aa18.76■□□□□ 0.59
CTTN-215ENST00000533931 TNNI2P48788 182 aa18.76■□□□□ 0.59
CTTN-215ENST00000533931 ANGEL2Q5VTE6 544 aaKnown RBP18.76■□□□□ 0.59
CTTN-215ENST00000533931 RBM46Q8TBY0 533 aaKnown RBP18.76■□□□□ 0.59
CTTN-215ENST00000533931 DIAPH3Q9NSV4 1193 aa18.76■□□□□ 0.59
CTTN-215ENST00000533931 RPAP1Q9BWH6 1393 aaPredicted RBP18.76■□□□□ 0.59
CTTN-215ENST00000533931 RAD50Q92878 1312 aa18.75■□□□□ 0.59
CTTN-215ENST00000533931 TOMM70O94826 608 aa18.75■□□□□ 0.59
CTTN-215ENST00000533931 GNAT2P19087 354 aa18.75■□□□□ 0.59
CTTN-215ENST00000533931 CHADLQ6NUI6 762 aa18.75■□□□□ 0.59
CTTN-215ENST00000533931 OSBP2Q969R2 916 aa18.75■□□□□ 0.59
CTTN-215ENST00000533931 AIDAQ96BJ3 306 aa18.75■□□□□ 0.59
CTTN-215ENST00000533931 CRNKL1Q9BZJ0 848 aaKnown RBP18.75■□□□□ 0.59
CTTN-215ENST00000533931 WDHD1O75717 1129 aaPredicted RBP18.74■□□□□ 0.59
CTTN-215ENST00000533931 MFAP1P55081 439 aaKnown RBP18.74■□□□□ 0.59
CTTN-215ENST00000533931 MCMDC2Q4G0Z9 681 aa18.74■□□□□ 0.59
CTTN-215ENST00000533931 CDC37L1Q7L3B6 337 aa18.74■□□□□ 0.59
CTTN-215ENST00000533931 SULF1Q8IWU6 871 aa18.74■□□□□ 0.59
CTTN-215ENST00000533931 TEX11Q8IYF3 940 aa18.74■□□□□ 0.59
CTTN-215ENST00000533931 MIGA1Q8NAN2 632 aa18.74■□□□□ 0.59
CTTN-215ENST00000533931 SMC1BQ8NDV3 1235 aa18.74■□□□□ 0.59
CTTN-215ENST00000533931 RUFY2Q8WXA3 655 aa18.74■□□□□ 0.59
CTTN-215ENST00000533931 PUS7LQ9H0K6 701 aaKnown RBP18.74■□□□□ 0.59
CTTN-215ENST00000533931 CLEC11AQ9Y240 323 aa18.74■□□□□ 0.59
CTTN-215ENST00000533931 CLRN2A0PK11 232 aa18.73■□□□□ 0.59
CTTN-215ENST00000533931 MBD4O95243 580 aa18.73■□□□□ 0.59
CTTN-215ENST00000533931 CHMLP26374 656 aa18.73■□□□□ 0.59
CTTN-215ENST00000533931 GIMAP6Q6P9H5 292 aa18.73■□□□□ 0.59
CTTN-215ENST00000533931 SH3RF3Q8TEJ3 882 aaPredicted RBP18.73■□□□□ 0.59
CTTN-215ENST00000533931 TAOK2Q9UL54 1235 aa18.73■□□□□ 0.59
CTTN-215ENST00000533931 ASTN2O75129 1339 aaPredicted RBP18.73■□□□□ 0.59
CTTN-215ENST00000533931 ATRNL1Q5VV63 1379 aa18.72■□□□□ 0.59
CTTN-215ENST00000533931 GPAA1O43292 621 aa18.72■□□□□ 0.59
CTTN-215ENST00000533931 CDC45O75419 566 aa18.72■□□□□ 0.59
CTTN-215ENST00000533931 POTEIP0CG38 1075 aa18.72■□□□□ 0.59
CTTN-215ENST00000533931 POTEJP0CG39 1038 aa18.72■□□□□ 0.59
CTTN-215ENST00000533931 DYNLL1P63167 89 aaKnown RBP18.72■□□□□ 0.59
CTTN-215ENST00000533931 FSTL1Q12841 308 aa18.72■□□□□ 0.59
CTTN-215ENST00000533931 NMIQ13287 307 aaPredicted RBP18.72■□□□□ 0.59
CTTN-215ENST00000533931 CASC1Q6TDU7 716 aa18.72■□□□□ 0.59
CTTN-215ENST00000533931 LCORLQ8N3X6 602 aa18.72■□□□□ 0.59
CTTN-215ENST00000533931 FAM151AQ8WW52 585 aa18.72■□□□□ 0.59
CTTN-215ENST00000533931 STRBPQ96SI9 672 aaKnown RBP18.72■□□□□ 0.59
CTTN-215ENST00000533931 VEZTQ9HBM0 779 aa18.72■□□□□ 0.59
CTTN-215ENST00000533931 ATP8A2Q9NTI2 1148 aa18.72■□□□□ 0.59
CTTN-215ENST00000533931 AK9Q5TCS8 1911 aa18.72■□□□□ 0.59
CTTN-215ENST00000533931 CNTNAP1P78357 1384 aa18.71■□□□□ 0.59
CTTN-215ENST00000533931 A0A0D9SFI3 127 aa18.71■□□□□ 0.59
CTTN-215ENST00000533931 M0R2C6 588 aa18.71■□□□□ 0.59
CTTN-215ENST00000533931 CHGBP05060 677 aa18.71■□□□□ 0.59
CTTN-215ENST00000533931 KRT26Q7Z3Y9 468 aa18.71■□□□□ 0.59
CTTN-215ENST00000533931 HOOK2Q96ED9 719 aa18.71■□□□□ 0.59
CTTN-215ENST00000533931 FAM227BQ96M60 508 aa18.71■□□□□ 0.59
CTTN-215ENST00000533931 DEFB129Q9H1M3 183 aa18.71■□□□□ 0.59
CTTN-215ENST00000533931 ARMT1Q9H993 441 aa18.71■□□□□ 0.59
CTTN-215ENST00000533931 FAM198AQ9UFP1 575 aa18.71■□□□□ 0.59
CTTN-215ENST00000533931 NFIAQ12857 509 aa18.7■□□□□ 0.58
CTTN-215ENST00000533931 RASA3Q14644 834 aa18.7■□□□□ 0.58
CTTN-215ENST00000533931 SLFNL1Q499Z3 407 aa18.7■□□□□ 0.58
CTTN-215ENST00000533931 DDRGK1Q96HY6 314 aa18.7■□□□□ 0.58
CTTN-215ENST00000533931 DHX36Q9H2U1 1008 aaKnown RBP18.7■□□□□ 0.58
CTTN-215ENST00000533931 MKRN1Q9UHC7 482 aaKnown RBP18.7■□□□□ 0.58
CTTN-215ENST00000533931 FLT1P17948 1338 aa18.7■□□□□ 0.58
CTTN-215ENST00000533931 CCDC171Q6TFL3 1326 aa18.7■□□□□ 0.58
CTTN-215ENST00000533931 USP5P45974 858 aa18.69■□□□□ 0.58
CTTN-215ENST00000533931 MAP1SQ66K74 1059 aaPredicted RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms