RNA–Protein interactions for RNA: ENST00000533398.5

VAV3-215, Transcript of vav guanine nucleotide exchange factor 3, humanhuman

TSL 4

Gene VAV3, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV3-215ENST00000533398 VGLL4Q14135 290 aa11.33□□□□□ -0.6
VAV3-215ENST00000533398 OTOP1Q7RTM1 612 aa11.33□□□□□ -0.6
VAV3-215ENST00000533398 TEKT1Q969V4 418 aa11.33□□□□□ -0.6
VAV3-215ENST00000533398 SIL1Q9H173 461 aa11.33□□□□□ -0.6
VAV3-215ENST00000533398 BMP2KQ9NSY1 1161 aaPredicted RBP11.33□□□□□ -0.6
VAV3-215ENST00000533398 SMC4Q9NTJ3 1288 aa11.33□□□□□ -0.6
VAV3-215ENST00000533398 FGFR2P21802 821 aa11.32□□□□□ -0.6
VAV3-215ENST00000533398 TNNI2P48788 182 aa11.32□□□□□ -0.6
VAV3-215ENST00000533398 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.32□□□□□ -0.6
VAV3-215ENST00000533398 BRI3BPQ8WY22 251 aa11.32□□□□□ -0.6
VAV3-215ENST00000533398 MS4A4AQ96JQ5 239 aa11.32□□□□□ -0.6
VAV3-215ENST00000533398 AK9Q5TCS8 1911 aa11.31□□□□□ -0.6
VAV3-215ENST00000533398 CCL15-CCL14A0A0B4J2E2 113 aa11.31□□□□□ -0.6
VAV3-215ENST00000533398 UNCXA6NJT0 531 aa11.31□□□□□ -0.6
VAV3-215ENST00000533398 EYA2O00167 538 aa11.31□□□□□ -0.6
VAV3-215ENST00000533398 MAP3K13O43283 966 aa11.31□□□□□ -0.6
VAV3-215ENST00000533398 ECM2O94769 699 aaPredicted RBP11.31□□□□□ -0.6
VAV3-215ENST00000533398 MAP3K9P80192 1104 aa11.31□□□□□ -0.6
VAV3-215ENST00000533398 PUM3Q15397 648 aaKnown RBP11.31□□□□□ -0.6
VAV3-215ENST00000533398 CCL15Q16663 113 aa11.31□□□□□ -0.6
VAV3-215ENST00000533398 APOBEC3HQ6NTF7 200 aaKnown RBP11.31□□□□□ -0.6
VAV3-215ENST00000533398 TBC1D22AQ8WUA7 517 aa11.31□□□□□ -0.6
VAV3-215ENST00000533398 ZKSCAN4Q969J2 545 aaPredicted RBP11.31□□□□□ -0.6
VAV3-215ENST00000533398 SCUBE2Q9NQ36 999 aa11.31□□□□□ -0.6
VAV3-215ENST00000533398 TESPA1A2RU30 521 aaPredicted RBP11.3□□□□□ -0.6
VAV3-215ENST00000533398 POTEFA5A3E0 1075 aa11.3□□□□□ -0.6
VAV3-215ENST00000533398 IFIT1P09914 478 aaKnown RBP11.3□□□□□ -0.6
VAV3-215ENST00000533398 SP3Q02447 781 aa11.3□□□□□ -0.6
VAV3-215ENST00000533398 TAF1CQ15572 869 aaPredicted RBP11.3□□□□□ -0.6
VAV3-215ENST00000533398 DIXDC1Q155Q3 683 aa11.3□□□□□ -0.6
VAV3-215ENST00000533398 OTUD7BQ6GQQ9 843 aa11.3□□□□□ -0.6
VAV3-215ENST00000533398 MIGA2Q7L4E1 593 aa11.3□□□□□ -0.6
VAV3-215ENST00000533398 ATG9AQ7Z3C6 839 aa11.3□□□□□ -0.6
VAV3-215ENST00000533398 RASEFQ8IZ41 740 aa11.3□□□□□ -0.6
VAV3-215ENST00000533398 FAM43AQ8N2R8 423 aa11.3□□□□□ -0.6
VAV3-215ENST00000533398 ERO1AQ96HE7 468 aa11.3□□□□□ -0.6
VAV3-215ENST00000533398 ZDHHC15Q96MV8 337 aa11.3□□□□□ -0.6
VAV3-215ENST00000533398 WRNIP1Q96S55 665 aa11.3□□□□□ -0.6
VAV3-215ENST00000533398 CSADQ9Y600 493 aa11.3□□□□□ -0.6
VAV3-215ENST00000533398 SNCAIPQ9Y6H5 919 aa11.3□□□□□ -0.6
VAV3-215ENST00000533398 SLC5A1P13866 664 aa11.29□□□□□ -0.6
VAV3-215ENST00000533398 HDLBPQ00341 1268 aaKnown RBP11.29□□□□□ -0.6
VAV3-215ENST00000533398 TCP10Q12799 353 aa11.29□□□□□ -0.6
VAV3-215ENST00000533398 FAM163AQ96GL9 167 aaPredicted RBP11.29□□□□□ -0.6
VAV3-215ENST00000533398 EFCC1Q9HA90 598 aa11.29□□□□□ -0.6
VAV3-215ENST00000533398 TMOD2Q9NZR1 351 aa11.29□□□□□ -0.6
VAV3-215ENST00000533398 NOB1Q9ULX3 412 aaKnown RBP11.29□□□□□ -0.6
VAV3-215ENST00000533398 PA2G4Q9UQ80 394 aaKnown RBP11.29□□□□□ -0.6
VAV3-215ENST00000533398 PTPN22Q9Y2R2 807 aa11.29□□□□□ -0.6
VAV3-215ENST00000533398 RBBP6Q7Z6E9 1792 aaKnown RBP11.28□□□□□ -0.6
VAV3-215ENST00000533398 SPDYE5A6NIY4 337 aa11.28□□□□□ -0.6
VAV3-215ENST00000533398 MYCP01106 439 aaPredicted RBP11.28□□□□□ -0.6
VAV3-215ENST00000533398 UBTFL1P0CB47 393 aaPredicted RBP11.28□□□□□ -0.6
VAV3-215ENST00000533398 PRDX5P30044 214 aa11.28□□□□□ -0.6
VAV3-215ENST00000533398 INPP5BP32019 993 aa11.28□□□□□ -0.6
VAV3-215ENST00000533398 GTF2A2P52657 109 aa11.28□□□□□ -0.6
VAV3-215ENST00000533398 NFIAQ12857 509 aa11.28□□□□□ -0.6
VAV3-215ENST00000533398 ATP2B3Q16720 1220 aa11.28□□□□□ -0.6
VAV3-215ENST00000533398 ALDH1L2Q3SY69 923 aa11.28□□□□□ -0.6
VAV3-215ENST00000533398 PRPF38BQ5VTL8 546 aaKnown RBP11.28□□□□□ -0.6
VAV3-215ENST00000533398 LPIN2Q92539 896 aa11.28□□□□□ -0.6
VAV3-215ENST00000533398 YTHDC1Q96MU7 727 aaKnown RBP11.28□□□□□ -0.6
VAV3-215ENST00000533398 ARHGAP39Q9C0H5 1083 aa11.28□□□□□ -0.6
VAV3-215ENST00000533398 DAGLAQ9Y4D2 1042 aa11.28□□□□□ -0.6
VAV3-215ENST00000533398 LRRFIP2Q9Y608 721 aaKnown RBP11.28□□□□□ -0.6
VAV3-215ENST00000533398 MYH2Q9UKX2 1941 aa11.27□□□□□ -0.6
VAV3-215ENST00000533398 BTBD19C9JJ37 291 aa11.27□□□□□ -0.61
VAV3-215ENST00000533398 IRF6O14896 467 aa11.27□□□□□ -0.61
VAV3-215ENST00000533398 ADORA1P30542 326 aa11.27□□□□□ -0.61
VAV3-215ENST00000533398 PHKA1P46020 1223 aa11.27□□□□□ -0.61
VAV3-215ENST00000533398 LCE2DQ5TA82 110 aaPredicted RBP11.27□□□□□ -0.61
VAV3-215ENST00000533398 CDC42EP5Q6NZY7 148 aa11.27□□□□□ -0.61
VAV3-215ENST00000533398 HHIPL2Q6UWX4 724 aa11.27□□□□□ -0.61
VAV3-215ENST00000533398 FAM83AQ86UY5 434 aa11.27□□□□□ -0.61
VAV3-215ENST00000533398 TRMT2AQ8IZ69 625 aaKnown RBP11.27□□□□□ -0.61
VAV3-215ENST00000533398 MEIS3Q99687 375 aa11.27□□□□□ -0.61
VAV3-215ENST00000533398 ZFYVE28Q9HCC9 887 aa11.27□□□□□ -0.61
VAV3-215ENST00000533398 PTCH2Q9Y6C5 1203 aa11.27□□□□□ -0.61
VAV3-215ENST00000533398 MAST3O60307 1309 aa11.27□□□□□ -0.61
VAV3-215ENST00000533398 KIF16BQ96L93 1317 aa11.27□□□□□ -0.61
VAV3-215ENST00000533398 DOCK2Q92608 1830 aa11.26□□□□□ -0.61
VAV3-215ENST00000533398 SLURP2P0DP57 97 aa11.26□□□□□ -0.61
VAV3-215ENST00000533398 EN2P19622 333 aaPredicted RBP11.26□□□□□ -0.61
VAV3-215ENST00000533398 TIE1P35590 1138 aa11.26□□□□□ -0.61
VAV3-215ENST00000533398 ERO1BQ86YB8 467 aa11.26□□□□□ -0.61
VAV3-215ENST00000533398 ZFPM1Q8IX07 1006 aa11.26□□□□□ -0.61
VAV3-215ENST00000533398 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.26□□□□□ -0.61
VAV3-215ENST00000533398 WDR66Q8TBY9 1149 aa11.26□□□□□ -0.61
VAV3-215ENST00000533398 MRIQ9BWK5 157 aa11.26□□□□□ -0.61
VAV3-215ENST00000533398 PCDH10Q9P2E7 1040 aa11.26□□□□□ -0.61
VAV3-215ENST00000533398 CEP126Q9P2H0 1117 aa11.26□□□□□ -0.61
VAV3-215ENST00000533398 SUGT1Q9Y2Z0 365 aa11.26□□□□□ -0.61
VAV3-215ENST00000533398 LDHBP07195 334 aaKnown RBP11.25□□□□□ -0.61
VAV3-215ENST00000533398 CETPP11597 493 aa11.25□□□□□ -0.61
VAV3-215ENST00000533398 PPIL2Q13356 520 aa11.25□□□□□ -0.61
VAV3-215ENST00000533398 FKBP1CQ5VVH2 108 aa11.25□□□□□ -0.61
VAV3-215ENST00000533398 ZNF341Q9BYN7 854 aa11.25□□□□□ -0.61
VAV3-215ENST00000533398 USP40Q9NVE5 1235 aa11.25□□□□□ -0.61
VAV3-215ENST00000533398 FAM198AQ9UFP1 575 aa11.25□□□□□ -0.61
VAV3-215ENST00000533398 TNNQ9UQP3 1299 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms