RNA–Protein interactions for RNA: ENST00000533170.1

AP003555.2-202, humanhuman

TSL 3

Gene AP003555.2, Length 369 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.2-202ENST00000533170 LMNB1P20700 586 aa6.73□□□□□ -1.33
AP003555.2-202ENST00000533170 SFSWAPQ12872 951 aaKnown RBP6.73□□□□□ -1.33
AP003555.2-202ENST00000533170 PTPN14Q15678 1187 aa6.73□□□□□ -1.33
AP003555.2-202ENST00000533170 C11orf91Q3C1V1 193 aa6.73□□□□□ -1.33
AP003555.2-202ENST00000533170 CRTC2Q53ET0 693 aaPredicted RBP6.73□□□□□ -1.33
AP003555.2-202ENST00000533170 CT47A1Q5JQC4 288 aaPredicted RBP6.73□□□□□ -1.33
AP003555.2-202ENST00000533170 JAKMIP3Q5VZ66 844 aa6.73□□□□□ -1.33
AP003555.2-202ENST00000533170 ZSCAN29Q8IWY8 852 aaPredicted RBP6.73□□□□□ -1.33
AP003555.2-202ENST00000533170 TEX9Q8N6V9 391 aa6.73□□□□□ -1.33
AP003555.2-202ENST00000533170 MAML1Q92585 1016 aa6.73□□□□□ -1.33
AP003555.2-202ENST00000533170 RSRC1Q96IZ7 334 aaKnown RBP6.73□□□□□ -1.33
AP003555.2-202ENST00000533170 GSDMAQ96QA5 445 aa6.73□□□□□ -1.33
AP003555.2-202ENST00000533170 IER2Q9BTL4 223 aa6.73□□□□□ -1.33
AP003555.2-202ENST00000533170 CCDC113Q9H0I3 377 aa6.73□□□□□ -1.33
AP003555.2-202ENST00000533170 CSRNP2Q9H175 543 aa6.73□□□□□ -1.33
AP003555.2-202ENST00000533170 SEPT10Q9P0V9 454 aa6.73□□□□□ -1.33
AP003555.2-202ENST00000533170 NOD1Q9Y239 953 aa6.73□□□□□ -1.33
AP003555.2-202ENST00000533170 SLC45A1Q9Y2W3 748 aa6.73□□□□□ -1.33
AP003555.2-202ENST00000533170 PRRT4C9JH25 899 aa6.72□□□□□ -1.33
AP003555.2-202ENST00000533170 ZBTB7BO15156 539 aaPredicted RBP6.72□□□□□ -1.33
AP003555.2-202ENST00000533170 MTRF1O75570 445 aaKnown RBP6.72□□□□□ -1.33
AP003555.2-202ENST00000533170 MYCP01106 439 aaPredicted RBP6.72□□□□□ -1.33
AP003555.2-202ENST00000533170 BMP1P13497 986 aa6.72□□□□□ -1.33
AP003555.2-202ENST00000533170 CCNCP24863 283 aa6.72□□□□□ -1.33
AP003555.2-202ENST00000533170 PRPHP41219 470 aa6.72□□□□□ -1.33
AP003555.2-202ENST00000533170 TSPAN7P41732 249 aa6.72□□□□□ -1.33
AP003555.2-202ENST00000533170 SCNN1DP51172 638 aa6.72□□□□□ -1.33
AP003555.2-202ENST00000533170 GTF2A1P52655 376 aaPredicted RBP6.72□□□□□ -1.33
AP003555.2-202ENST00000533170 GTF2IP78347 998 aa6.72□□□□□ -1.33
AP003555.2-202ENST00000533170 AMPD3Q01432 767 aa6.72□□□□□ -1.33
AP003555.2-202ENST00000533170 PTK7Q13308 1070 aa6.72□□□□□ -1.33
AP003555.2-202ENST00000533170 EAPPQ56P03 285 aaPredicted RBP6.72□□□□□ -1.33
AP003555.2-202ENST00000533170 DNAJC21Q5F1R6 531 aaKnown RBP6.72□□□□□ -1.33
AP003555.2-202ENST00000533170 C10orf62Q5T681 223 aaPredicted RBP6.72□□□□□ -1.33
AP003555.2-202ENST00000533170 AP1ARQ63HQ0 302 aa6.72□□□□□ -1.33
AP003555.2-202ENST00000533170 KANK3Q6NY19 840 aa6.72□□□□□ -1.33
AP003555.2-202ENST00000533170 TRIM46Q7Z4K8 759 aa6.72□□□□□ -1.33
AP003555.2-202ENST00000533170 ZNF354CQ86Y25 554 aa6.72□□□□□ -1.33
AP003555.2-202ENST00000533170 ARL10Q8N8L6 244 aa6.72□□□□□ -1.33
AP003555.2-202ENST00000533170 ZNF280CQ8ND82 737 aa6.72□□□□□ -1.33
AP003555.2-202ENST00000533170 USP6NLQ92738 828 aa6.72□□□□□ -1.33
AP003555.2-202ENST00000533170 JARID2Q92833 1246 aaPredicted RBP6.72□□□□□ -1.33
AP003555.2-202ENST00000533170 RNF34Q969K3 372 aa6.72□□□□□ -1.33
AP003555.2-202ENST00000533170 SKA1Q96BD8 255 aa6.72□□□□□ -1.33
AP003555.2-202ENST00000533170 NEK1Q96PY6 1258 aa6.72□□□□□ -1.33
AP003555.2-202ENST00000533170 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.72□□□□□ -1.33
AP003555.2-202ENST00000533170 RPAP3Q9H6T3 665 aaPredicted RBP6.72□□□□□ -1.33
AP003555.2-202ENST00000533170 LGR6Q9HBX8 967 aa6.72□□□□□ -1.33
AP003555.2-202ENST00000533170 RIC8AQ9NPQ8 531 aa6.72□□□□□ -1.33
AP003555.2-202ENST00000533170 KMT5AQ9NQR1 393 aa6.72□□□□□ -1.33
AP003555.2-202ENST00000533170 HOXC10Q9NYD6 342 aa6.72□□□□□ -1.33
AP003555.2-202ENST00000533170 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.72□□□□□ -1.33
AP003555.2-202ENST00000533170 PIK3R4Q99570 1358 aa6.71□□□□□ -1.33
AP003555.2-202ENST00000533170 FAM196BA6NMK8 535 aa6.71□□□□□ -1.34
AP003555.2-202ENST00000533170 ATP5J2-PTCD1G3V325 749 aa6.71□□□□□ -1.34
AP003555.2-202ENST00000533170 FOXN3O00409 490 aaPredicted RBP6.71□□□□□ -1.34
AP003555.2-202ENST00000533170 AXIN1O15169 862 aa6.71□□□□□ -1.34
AP003555.2-202ENST00000533170 EXOSC10Q01780 885 aaKnown RBP6.71□□□□□ -1.34
AP003555.2-202ENST00000533170 SIM2Q14190 667 aaPredicted RBP6.71□□□□□ -1.34
AP003555.2-202ENST00000533170 TOMM20Q15388 145 aa6.71□□□□□ -1.34
AP003555.2-202ENST00000533170 SF3B3Q15393 1217 aaKnown RBP6.71□□□□□ -1.34
AP003555.2-202ENST00000533170 PUM3Q15397 648 aaKnown RBP6.71□□□□□ -1.34
AP003555.2-202ENST00000533170 SYCP1Q15431 976 aa6.71□□□□□ -1.34
AP003555.2-202ENST00000533170 ACBD5Q5T8D3 534 aaPredicted RBP6.71□□□□□ -1.34
AP003555.2-202ENST00000533170 TAS1R3Q7RTX0 852 aa6.71□□□□□ -1.34
AP003555.2-202ENST00000533170 KIAA0825Q8IV33 1275 aa6.71□□□□□ -1.34
AP003555.2-202ENST00000533170 IFNL2Q8IZJ0 200 aa6.71□□□□□ -1.34
AP003555.2-202ENST00000533170 SIX5Q8N196 739 aa6.71□□□□□ -1.34
AP003555.2-202ENST00000533170 STAG2Q8N3U4 1231 aa6.71□□□□□ -1.34
AP003555.2-202ENST00000533170 TMEM87AQ8NBN3 555 aa6.71□□□□□ -1.34
AP003555.2-202ENST00000533170 RASSF8Q8NHQ8 419 aa6.71□□□□□ -1.34
AP003555.2-202ENST00000533170 AFAP1L1Q8TED9 768 aa6.71□□□□□ -1.34
AP003555.2-202ENST00000533170 TACO1Q9BSH4 297 aaKnown RBP6.71□□□□□ -1.34
AP003555.2-202ENST00000533170 METTL5Q9NRN9 209 aaKnown RBP6.71□□□□□ -1.34
AP003555.2-202ENST00000533170 TMOD4Q9NZQ9 345 aa6.71□□□□□ -1.34
AP003555.2-202ENST00000533170 RABL2AQ9UBK7 228 aaPredicted RBP6.71□□□□□ -1.34
AP003555.2-202ENST00000533170 CLIP2Q9UDT6 1046 aa6.71□□□□□ -1.34
AP003555.2-202ENST00000533170 PGAP2Q9UHJ9 254 aa6.71□□□□□ -1.34
AP003555.2-202ENST00000533170 DACH1Q9UI36 760 aa6.71□□□□□ -1.34
AP003555.2-202ENST00000533170 ATP6V0A2Q9Y487 856 aa6.71□□□□□ -1.34
AP003555.2-202ENST00000533170 CCDC180Q9P1Z9 1646 aa6.7□□□□□ -1.34
AP003555.2-202ENST00000533170 TMEM229AB2RXF0 380 aa6.7□□□□□ -1.34
AP003555.2-202ENST00000533170 USP17L15C9J2P7 530 aa6.7□□□□□ -1.34
AP003555.2-202ENST00000533170 USP17L10C9JJH3 530 aa6.7□□□□□ -1.34
AP003555.2-202ENST00000533170 USP17L13C9JLJ4 530 aa6.7□□□□□ -1.34
AP003555.2-202ENST00000533170 USP17L12C9JPN9 530 aa6.7□□□□□ -1.34
AP003555.2-202ENST00000533170 USP17L11C9JVI0 530 aa6.7□□□□□ -1.34
AP003555.2-202ENST00000533170 USP17L21D6R901 530 aa6.7□□□□□ -1.34
AP003555.2-202ENST00000533170 USP17L18D6R9N7 530 aa6.7□□□□□ -1.34
AP003555.2-202ENST00000533170 USP17L22D6RA61 530 aa6.7□□□□□ -1.34
AP003555.2-202ENST00000533170 USP17L17D6RBQ6 530 aa6.7□□□□□ -1.34
AP003555.2-202ENST00000533170 USP17L19D6RCP7 530 aa6.7□□□□□ -1.34
AP003555.2-202ENST00000533170 USP17L20D6RJB6 530 aa6.7□□□□□ -1.34
AP003555.2-202ENST00000533170 COBLO75128 1261 aa6.7□□□□□ -1.34
AP003555.2-202ENST00000533170 IFIT2P09913 472 aaKnown RBP6.7□□□□□ -1.34
AP003555.2-202ENST00000533170 TSPY4P0CV99 314 aa6.7□□□□□ -1.34
AP003555.2-202ENST00000533170 TSPY10P0CW01 314 aa6.7□□□□□ -1.34
AP003555.2-202ENST00000533170 ATF3P18847 181 aa6.7□□□□□ -1.34
AP003555.2-202ENST00000533170 RASA1P20936 1047 aa6.7□□□□□ -1.34
AP003555.2-202ENST00000533170 USP17L24Q0WX57 530 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms