RNA–Protein interactions for RNA: ENST00000533145.5

HIF3A-215, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-215ENST00000533145 ZBTB12Q9Y330 459 aaPredicted RBP16.89■□□□□ 0.29
HIF3A-215ENST00000533145 DAGLAQ9Y4D2 1042 aa16.89■□□□□ 0.29
HIF3A-215ENST00000533145 FOCADQ5VW36 1801 aa16.89■□□□□ 0.29
HIF3A-215ENST00000533145 ECM29Q5VYK3 1845 aa16.89■□□□□ 0.29
HIF3A-215ENST00000533145 F8W031 263 aaPredicted RBP16.88■□□□□ 0.29
HIF3A-215ENST00000533145 FOXP2O15409 715 aa16.88■□□□□ 0.29
HIF3A-215ENST00000533145 USP17L8P0C7I0 530 aa16.88■□□□□ 0.29
HIF3A-215ENST00000533145 DYNLL1P63167 89 aaKnown RBP16.88■□□□□ 0.29
HIF3A-215ENST00000533145 GPC2Q8N158 579 aa16.88■□□□□ 0.29
HIF3A-215ENST00000533145 LCORLQ8N3X6 602 aa16.88■□□□□ 0.29
HIF3A-215ENST00000533145 NOL10Q9BSC4 688 aaKnown RBP16.88■□□□□ 0.29
HIF3A-215ENST00000533145 ARMT1Q9H993 441 aa16.88■□□□□ 0.29
HIF3A-215ENST00000533145 AATFQ9NY61 560 aaKnown RBP eCLIP16.88■□□□□ 0.29
HIF3A-215ENST00000533145 ZNF541Q9H0D2 1346 aa16.88■□□□□ 0.29
HIF3A-215ENST00000533145 BTDP43251 543 aa16.87■□□□□ 0.29
HIF3A-215ENST00000533145 RBM25P49756 843 aaKnown RBP16.87■□□□□ 0.29
HIF3A-215ENST00000533145 SCNN1DP51172 638 aa16.87■□□□□ 0.29
HIF3A-215ENST00000533145 RHBDL3P58872 404 aa16.87■□□□□ 0.29
HIF3A-215ENST00000533145 ZNF280AP59817 542 aaPredicted RBP16.87■□□□□ 0.29
HIF3A-215ENST00000533145 NECTIN1Q15223 517 aa16.87■□□□□ 0.29
HIF3A-215ENST00000533145 VPS53Q5VIR6 699 aa16.87■□□□□ 0.29
HIF3A-215ENST00000533145 APOBEC3HQ6NTF7 200 aaKnown RBP16.87■□□□□ 0.29
HIF3A-215ENST00000533145 GIMAP6Q6P9H5 292 aa16.87■□□□□ 0.29
HIF3A-215ENST00000533145 OGFOD1Q8N543 542 aa16.87■□□□□ 0.29
HIF3A-215ENST00000533145 U3KPZ7 1027 aaPredicted RBP16.87■□□□□ 0.29
HIF3A-215ENST00000533145 ZMYM6O95789 1325 aa16.87■□□□□ 0.29
HIF3A-215ENST00000533145 ADAMTSL1Q8N6G6 1762 aa16.87■□□□□ 0.29
HIF3A-215ENST00000533145 GSG1L2A8MUP6 293 aa16.86■□□□□ 0.29
HIF3A-215ENST00000533145 KCNB2Q92953 911 aa16.86■□□□□ 0.29
HIF3A-215ENST00000533145 IL17RAQ96F46 866 aa16.86■□□□□ 0.29
HIF3A-215ENST00000533145 TBC1D32Q96NH3 1257 aa16.86■□□□□ 0.29
HIF3A-215ENST00000533145 C22orf23Q9BZE7 217 aa16.86■□□□□ 0.29
HIF3A-215ENST00000533145 CRNKL1Q9BZJ0 848 aaKnown RBP16.86■□□□□ 0.29
HIF3A-215ENST00000533145 GOLGB1Q14789 3259 aaKnown RBP16.86■□□□□ 0.29
HIF3A-215ENST00000533145 HSPA4P34932 840 aa16.85■□□□□ 0.29
HIF3A-215ENST00000533145 CFAP100Q494V2 611 aa16.85■□□□□ 0.29
HIF3A-215ENST00000533145 ZBED3Q96IU2 234 aaPredicted RBP16.85■□□□□ 0.29
HIF3A-215ENST00000533145 ATP8A2Q9NTI2 1148 aa16.85■□□□□ 0.29
HIF3A-215ENST00000533145 RBM8AQ9Y5S9 174 aaKnown RBP16.85■□□□□ 0.29
HIF3A-215ENST00000533145 SLC4A4Q9Y6R1 1079 aa16.85■□□□□ 0.29
HIF3A-215ENST00000533145 FGAP02671 866 aa16.84■□□□□ 0.29
HIF3A-215ENST00000533145 GMPSP49915 693 aaPredicted RBP16.84■□□□□ 0.29
HIF3A-215ENST00000533145 DPY19L2Q6NUT2 758 aa16.84■□□□□ 0.29
HIF3A-215ENST00000533145 IFNL3Q8IZI9 196 aa16.84■□□□□ 0.29
HIF3A-215ENST00000533145 SH3RF3Q8TEJ3 882 aaPredicted RBP16.84■□□□□ 0.29
HIF3A-215ENST00000533145 MKRN1Q9UHC7 482 aaKnown RBP16.84■□□□□ 0.29
HIF3A-215ENST00000533145 CTNNA3Q9UI47 895 aa16.84■□□□□ 0.29
HIF3A-215ENST00000533145 CNOT7Q9UIV1 285 aaKnown RBP16.84■□□□□ 0.29
HIF3A-215ENST00000533145 GJA3Q9Y6H8 435 aa16.84■□□□□ 0.29
HIF3A-215ENST00000533145 BAZ2AQ9UIF9 1905 aaKnown RBP16.84■□□□□ 0.29
HIF3A-215ENST00000533145 PRKAB2O43741 272 aa16.83■□□□□ 0.28
HIF3A-215ENST00000533145 NPM3O75607 178 aaKnown RBP16.83■□□□□ 0.28
HIF3A-215ENST00000533145 MCCP23508 829 aa16.83■□□□□ 0.28
HIF3A-215ENST00000533145 ANAPC15P60006 121 aa16.83■□□□□ 0.28
HIF3A-215ENST00000533145 DLGAP5Q15398 846 aa16.83■□□□□ 0.28
HIF3A-215ENST00000533145 TSGA10IPQ3SY00 556 aa16.83■□□□□ 0.28
HIF3A-215ENST00000533145 CDC42EP5Q6NZY7 148 aa16.83■□□□□ 0.28
HIF3A-215ENST00000533145 PRMT6Q96LA8 375 aaPredicted RBP16.83■□□□□ 0.28
HIF3A-215ENST00000533145 NACAP1Q9BZK3 213 aa16.83■□□□□ 0.28
HIF3A-215ENST00000533145 EPB41L4AQ9HCS5 686 aaPredicted RBP16.83■□□□□ 0.28
HIF3A-215ENST00000533145 MYH1P12882 1939 aa16.82■□□□□ 0.28
HIF3A-215ENST00000533145 LAMA4Q16363 1823 aa16.82■□□□□ 0.28
HIF3A-215ENST00000533145 SPDYE2BA6NHP3 402 aa16.82■□□□□ 0.28
HIF3A-215ENST00000533145 APPP05067 770 aa16.82■□□□□ 0.28
HIF3A-215ENST00000533145 SPDYE6P0CI01 402 aa16.82■□□□□ 0.28
HIF3A-215ENST00000533145 RBM5P52756 815 aaKnown RBP eCLIP16.82■□□□□ 0.28
HIF3A-215ENST00000533145 SDR42E1Q8WUS8 393 aa16.82■□□□□ 0.28
HIF3A-215ENST00000533145 IDI2Q9BXS1 227 aa16.82■□□□□ 0.28
HIF3A-215ENST00000533145 MYOZ2Q9NPC6 264 aa16.82■□□□□ 0.28
HIF3A-215ENST00000533145 DCP1AQ9NPI6 582 aaPredicted RBP16.82■□□□□ 0.28
HIF3A-215ENST00000533145 USP40Q9NVE5 1235 aa16.82■□□□□ 0.28
HIF3A-215ENST00000533145 GPRC5DQ9NZD1 345 aa16.82■□□□□ 0.28
HIF3A-215ENST00000533145 GLTPD2A6NH11 291 aa16.81■□□□□ 0.28
HIF3A-215ENST00000533145 H7C1D1 291 aa16.81■□□□□ 0.28
HIF3A-215ENST00000533145 DDNO94850 711 aaPredicted RBP16.81■□□□□ 0.28
HIF3A-215ENST00000533145 SBK1Q52WX2 424 aa16.81■□□□□ 0.28
HIF3A-215ENST00000533145 RNF20Q5VTR2 975 aa16.81■□□□□ 0.28
HIF3A-215ENST00000533145 CREB3L3Q68CJ9 461 aa16.81■□□□□ 0.28
HIF3A-215ENST00000533145 MICALL2Q8IY33 904 aa16.81■□□□□ 0.28
HIF3A-215ENST00000533145 TEX11Q8IYF3 940 aa16.81■□□□□ 0.28
HIF3A-215ENST00000533145 L3MBTL3Q96JM7 780 aaPredicted RBP16.81■□□□□ 0.28
HIF3A-215ENST00000533145 NAPBQ9H115 298 aa16.81■□□□□ 0.28
HIF3A-215ENST00000533145 PCDHAC2Q9Y5I4 1007 aa16.81■□□□□ 0.28
HIF3A-215ENST00000533145 NAV1Q8NEY1 1877 aa16.8■□□□□ 0.28
HIF3A-215ENST00000533145 DDX60LQ5H9U9 1706 aaKnown RBP16.8■□□□□ 0.28
HIF3A-215ENST00000533145 SLC27A2O14975 620 aa16.8■□□□□ 0.28
HIF3A-215ENST00000533145 WDHD1O75717 1129 aaPredicted RBP16.8■□□□□ 0.28
HIF3A-215ENST00000533145 USP5P45974 858 aa16.8■□□□□ 0.28
HIF3A-215ENST00000533145 FKBP1CQ5VVH2 108 aa16.8■□□□□ 0.28
HIF3A-215ENST00000533145 TGFBRAP1Q8WUH2 860 aa16.8■□□□□ 0.28
HIF3A-215ENST00000533145 DDRGK1Q96HY6 314 aa16.8■□□□□ 0.28
HIF3A-215ENST00000533145 TSHZ2Q9NRE2 1034 aa16.8■□□□□ 0.28
HIF3A-215ENST00000533145 ANAPC4Q9UJX5 808 aa16.8■□□□□ 0.28
HIF3A-215ENST00000533145 SCN4AP35499 1836 aa16.8■□□□□ 0.28
HIF3A-215ENST00000533145 WNT10BO00744 389 aa16.79■□□□□ 0.28
HIF3A-215ENST00000533145 CYP21A2P08686 494 aa16.79■□□□□ 0.28
HIF3A-215ENST00000533145 IMMTQ16891 758 aaKnown RBP16.79■□□□□ 0.28
HIF3A-215ENST00000533145 IL27Q8NEV9 243 aa16.79■□□□□ 0.28
HIF3A-215ENST00000533145 KIF2CQ99661 725 aa16.79■□□□□ 0.28
HIF3A-215ENST00000533145 TDRD3Q9H7E2 651 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms