RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 VEZTQ9HBM0 779 aa30.18■■■□□ 2.42
USP48-214ENST00000532737 STAP2Q9UGK3 403 aa30.18■■■□□ 2.42
USP48-214ENST00000532737 MROH7-TTC4A0A0A0MT08 1334 aa30.18■■■□□ 2.42
USP48-214ENST00000532737 POLR2AP24928 1970 aaKnown RBP30.17■■■□□ 2.42
USP48-214ENST00000532737 LDHCP07864 332 aa30.17■■■□□ 2.42
USP48-214ENST00000532737 IGSF3O75054 1194 aa30.16■■■□□ 2.42
USP48-214ENST00000532737 PDE1AP54750 535 aa30.16■■■□□ 2.42
USP48-214ENST00000532737 NAA16Q6N069 864 aaPredicted RBP30.16■■■□□ 2.42
USP48-214ENST00000532737 CDC42EP5Q6NZY7 148 aa30.16■■■□□ 2.42
USP48-214ENST00000532737 GPR75-ASB3A0A0A6YYF3 556 aa30.15■■■□□ 2.42
USP48-214ENST00000532737 VEGFBP49765 207 aa30.15■■■□□ 2.42
USP48-214ENST00000532737 CACNB3P54284 484 aa30.15■■■□□ 2.42
USP48-214ENST00000532737 MAP3K12Q12852 859 aa30.15■■■□□ 2.42
USP48-214ENST00000532737 ERC2O15083 957 aa30.14■■■□□ 2.42
USP48-214ENST00000532737 GLRX3O76003 335 aaKnown RBP30.14■■■□□ 2.42
USP48-214ENST00000532737 BTDP43251 543 aa30.14■■■□□ 2.42
USP48-214ENST00000532737 PRAMEF18Q5VWM3 479 aa30.14■■■□□ 2.42
USP48-214ENST00000532737 ADGRA1Q86SQ6 560 aa30.14■■■□□ 2.42
USP48-214ENST00000532737 DEFB129Q9H1M3 183 aa30.14■■■□□ 2.42
USP48-214ENST00000532737 USP40Q9NVE5 1235 aa30.14■■■□□ 2.42
USP48-214ENST00000532737 MAGEB6Q8N7X4 407 aa30.13■■■□□ 2.41
USP48-214ENST00000532737 CDCA5Q96FF9 252 aa30.13■■■□□ 2.41
USP48-214ENST00000532737 MYO5AQ9Y4I1 1855 aaKnown RBP30.12■■■□□ 2.41
USP48-214ENST00000532737 TCP10L2B9ZVM9 353 aa30.12■■■□□ 2.41
USP48-214ENST00000532737 CYP7A1P22680 504 aa30.12■■■□□ 2.41
USP48-214ENST00000532737 CST9Q5W186 159 aa30.12■■■□□ 2.41
USP48-214ENST00000532737 PLEKHM2Q8IWE5 1019 aa30.12■■■□□ 2.41
USP48-214ENST00000532737 MYH2Q9UKX2 1941 aa30.12■■■□□ 2.41
USP48-214ENST00000532737 FOXN1O15353 648 aa30.11■■■□□ 2.41
USP48-214ENST00000532737 CAPN15O75808 1086 aa30.11■■■□□ 2.41
USP48-214ENST00000532737 MAP4K4O95819 1239 aaPredicted RBP30.11■■■□□ 2.41
USP48-214ENST00000532737 RASA3Q14644 834 aa30.11■■■□□ 2.41
USP48-214ENST00000532737 TMOD2Q9NZR1 351 aa30.11■■■□□ 2.41
USP48-214ENST00000532737 RASSF10A6NK89 507 aa30.1■■■□□ 2.41
USP48-214ENST00000532737 PDE6AP16499 860 aa30.1■■■□□ 2.41
USP48-214ENST00000532737 PDE4AP27815 886 aa30.1■■■□□ 2.41
USP48-214ENST00000532737 RHBDL3P58872 404 aa30.1■■■□□ 2.41
USP48-214ENST00000532737 SLC9C2Q5TAH2 1124 aa30.1■■■□□ 2.41
USP48-214ENST00000532737 FKBP1CQ5VVH2 108 aa30.1■■■□□ 2.41
USP48-214ENST00000532737 ZNF408Q9H9D4 720 aa30.1■■■□□ 2.41
USP48-214ENST00000532737 ECM29Q5VYK3 1845 aa30.1■■■□□ 2.41
USP48-214ENST00000532737 CELF2O95319 508 aaKnown RBP30.09■■■□□ 2.41
USP48-214ENST00000532737 TNFAIP1Q13829 316 aa30.09■■■□□ 2.41
USP48-214ENST00000532737 THSD7BQ9C0I4 1608 aa30.08■■■□□ 2.41
USP48-214ENST00000532737 NFIAQ12857 509 aa30.08■■■□□ 2.41
USP48-214ENST00000532737 CENPQQ7L2Z9 268 aaPredicted RBP30.08■■■□□ 2.41
USP48-214ENST00000532737 CCDC136Q96JN2 1154 aa30.08■■■□□ 2.41
USP48-214ENST00000532737 PPP2R3BQ9Y5P8 575 aa30.08■■■□□ 2.41
USP48-214ENST00000532737 DOCK2Q92608 1830 aa30.08■■■□□ 2.41
USP48-214ENST00000532737 MAST2Q6P0Q8 1798 aa30.08■■■□□ 2.41
USP48-214ENST00000532737 PPP4CP60510 307 aa30.07■■■□□ 2.4
USP48-214ENST00000532737 TMED8Q6PL24 325 aaPredicted RBP30.07■■■□□ 2.4
USP48-214ENST00000532737 KBTBD3Q8NAB2 608 aa30.07■■■□□ 2.4
USP48-214ENST00000532737 AATFQ9NY61 560 aaKnown RBP eCLIP30.07■■■□□ 2.4
USP48-214ENST00000532737 ZNF532Q9HCE3 1301 aa30.06■■■□□ 2.4
USP48-214ENST00000532737 TCRBV5S4A2TA0A5A2 114 aa30.06■■■□□ 2.4
USP48-214ENST00000532737 CHGBP05060 677 aa30.06■■■□□ 2.4
USP48-214ENST00000532737 TNNI2P48788 182 aa30.06■■■□□ 2.4
USP48-214ENST00000532737 SLFNL1Q499Z3 407 aa30.06■■■□□ 2.4
USP48-214ENST00000532737 NOL10Q9BSC4 688 aaKnown RBP30.06■■■□□ 2.4
USP48-214ENST00000532737 OSBPL3Q9H4L5 887 aa30.06■■■□□ 2.4
USP48-214ENST00000532737 FAM198AQ9UFP1 575 aa30.06■■■□□ 2.4
USP48-214ENST00000532737 WDHD1O75717 1129 aaPredicted RBP30.05■■■□□ 2.4
USP48-214ENST00000532737 BAG3O95817 575 aa30.05■■■□□ 2.4
USP48-214ENST00000532737 ADD2P35612 726 aa30.05■■■□□ 2.4
USP48-214ENST00000532737 DYNLL1P63167 89 aaKnown RBP30.05■■■□□ 2.4
USP48-214ENST00000532737 DEFB115Q30KQ5 88 aa30.05■■■□□ 2.4
USP48-214ENST00000532737 ERICH6BQ5W0A0 696 aa30.05■■■□□ 2.4
USP48-214ENST00000532737 FAM83AQ86UY5 434 aa30.05■■■□□ 2.4
USP48-214ENST00000532737 MIGA1Q8NAN2 632 aa30.05■■■□□ 2.4
USP48-214ENST00000532737 SH3RF3Q8TEJ3 882 aaPredicted RBP30.05■■■□□ 2.4
USP48-214ENST00000532737 IDI2Q9BXS1 227 aa30.05■■■□□ 2.4
USP48-214ENST00000532737 DDX24Q9GZR7 859 aaKnown RBP eCLIP30.05■■■□□ 2.41e-8■■■□□ 16.4
USP48-214ENST00000532737 TMEM39BQ9GZU3 492 aa30.05■■■□□ 2.4
USP48-214ENST00000532737 CDAN1Q8IWY9 1227 aa30.04■■■□□ 2.4
USP48-214ENST00000532737 TEPSINQ96N21 525 aa30.04■■■□□ 2.4
USP48-214ENST00000532737 WBP1LQ9NX94 342 aa30.04■■■□□ 2.4
USP48-214ENST00000532737 RGS3P49796 1198 aa30.03■■■□□ 2.4
USP48-214ENST00000532737 TCP10Q12799 353 aa30.03■■■□□ 2.4
USP48-214ENST00000532737 NBPF12Q5TAG4 269 aaPredicted RBP30.03■■■□□ 2.4
USP48-214ENST00000532737 ZFPM1Q8IX07 1006 aa30.03■■■□□ 2.4
USP48-214ENST00000532737 RFX7Q2KHR2 1363 aa30.03■■■□□ 2.4
USP48-214ENST00000532737 TEX11Q8IYF3 940 aa30.02■■■□□ 2.4
USP48-214ENST00000532737 FAM151AQ8WW52 585 aa30.02■■■□□ 2.4
USP48-214ENST00000532737 DDX4Q9NQI0 724 aaKnown RBP30.02■■■□□ 2.4
USP48-214ENST00000532737 PRDM10Q9NQV6 1147 aa30.02■■■□□ 2.4
USP48-214ENST00000532737 UBE3CQ15386 1083 aa30.01■■■□□ 2.39
USP48-214ENST00000532737 ZSCAN25Q6NSZ9 544 aa30.01■■■□□ 2.39
USP48-214ENST00000532737 GBA2Q9HCG7 927 aaPredicted RBP30.01■■■□□ 2.39
USP48-214ENST00000532737 ABT1Q9ULW3 272 aaKnown RBP30.01■■■□□ 2.39
USP48-214ENST00000532737 WDR33Q9C0J8 1336 aaKnown RBP30■■■□□ 2.39
USP48-214ENST00000532737 ENTPD3O75355 529 aa30■■■□□ 2.39
USP48-214ENST00000532737 PLCG2P16885 1265 aa30■■■□□ 2.39
USP48-214ENST00000532737 CTCFP49711 727 aaPredicted RBP30■■■□□ 2.39
USP48-214ENST00000532737 AIDAQ96BJ3 306 aa30■■■□□ 2.39
USP48-214ENST00000532737 RIOK1Q9BRS2 568 aaKnown RBP30■■■□□ 2.39
USP48-214ENST00000532737 PPP4R2Q9NY27 417 aa30■■■□□ 2.39
USP48-214ENST00000532737 NF2P35240 595 aa29.99■■■□□ 2.39
USP48-214ENST00000532737 PICALMQ13492 652 aa29.99■■■□□ 2.39
USP48-214ENST00000532737 SUPT20HL1Q3ZLR7 823 aa29.99■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms