RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 AFAP1L1Q8TED9 768 aa7.76□□□□□ -1.17
TGFBR3-209ENST00000532540 FSD1Q9BTV5 496 aa7.76□□□□□ -1.17
TGFBR3-209ENST00000532540 ADAM21Q9UKJ8 722 aa7.76□□□□□ -1.17
TGFBR3-209ENST00000532540 CYP46A1Q9Y6A2 500 aa7.76□□□□□ -1.17
TGFBR3-209ENST00000532540 PTPRCP08575 1304 aa7.76□□□□□ -1.17
TGFBR3-209ENST00000532540 NEURL1BA8MQ27 555 aa7.76□□□□□ -1.17
TGFBR3-209ENST00000532540 ECM2O94769 699 aaPredicted RBP7.76□□□□□ -1.17
TGFBR3-209ENST00000532540 CLSTN1O94985 981 aa7.76□□□□□ -1.17
TGFBR3-209ENST00000532540 GRM1Q13255 1194 aa7.76□□□□□ -1.17
TGFBR3-209ENST00000532540 KIF24Q5T7B8 1368 aa7.76□□□□□ -1.17
TGFBR3-209ENST00000532540 CCDC158Q5M9N0 1113 aa7.76□□□□□ -1.17
TGFBR3-209ENST00000532540 OTUD7AQ8TE49 926 aaPredicted RBP7.76□□□□□ -1.17
TGFBR3-209ENST00000532540 PUS3Q9BZE2 481 aaKnown RBP7.76□□□□□ -1.17
TGFBR3-209ENST00000532540 USP44Q9H0E7 712 aa7.76□□□□□ -1.17
TGFBR3-209ENST00000532540 KIAA1210Q9ULL0 1709 aa7.76□□□□□ -1.17
TGFBR3-209ENST00000532540 TUBBP07437 444 aa7.75□□□□□ -1.17
TGFBR3-209ENST00000532540 TOP1P11387 765 aaKnown RBP7.75□□□□□ -1.17
TGFBR3-209ENST00000532540 SDSP20132 328 aa7.75□□□□□ -1.17
TGFBR3-209ENST00000532540 ME1P48163 572 aa7.75□□□□□ -1.17
TGFBR3-209ENST00000532540 TUBB4BP68371 445 aa7.75□□□□□ -1.17
TGFBR3-209ENST00000532540 JPH2Q9BR39 696 aaPredicted RBP7.75□□□□□ -1.17
TGFBR3-209ENST00000532540 TFIP11Q9UBB9 837 aaKnown RBP7.75□□□□□ -1.17
TGFBR3-209ENST00000532540 A0A0G2JLW4 131 aa7.75□□□□□ -1.17
TGFBR3-209ENST00000532540 EFCAB8A8MWE9 144 aa7.75□□□□□ -1.17
TGFBR3-209ENST00000532540 SEC31AO94979 1220 aaKnown RBP7.75□□□□□ -1.17
TGFBR3-209ENST00000532540 ERCC3P19447 782 aa7.75□□□□□ -1.17
TGFBR3-209ENST00000532540 DDIT3P35638 169 aa7.75□□□□□ -1.17
TGFBR3-209ENST00000532540 ANAPC15P60006 121 aa7.75□□□□□ -1.17
TGFBR3-209ENST00000532540 CCDC152Q4G0S7 254 aa7.75□□□□□ -1.17
TGFBR3-209ENST00000532540 CACTINQ8WUQ7 758 aaKnown RBP7.75□□□□□ -1.17
TGFBR3-209ENST00000532540 ZNF396Q96N95 335 aaPredicted RBP7.75□□□□□ -1.17
TGFBR3-209ENST00000532540 GREM2Q9H772 168 aa7.75□□□□□ -1.17
TGFBR3-209ENST00000532540 SLC24A3Q9HC58 644 aa7.75□□□□□ -1.17
TGFBR3-209ENST00000532540 ZBTB40Q9NUA8 1239 aa7.75□□□□□ -1.17
TGFBR3-209ENST00000532540 OVOS2A0A0G2JMS6 1433 aa7.75□□□□□ -1.17
TGFBR3-209ENST00000532540 POLR1AO95602 1720 aaPredicted RBP7.75□□□□□ -1.17
TGFBR3-209ENST00000532540 CHD2O14647 1828 aaKnown RBP7.75□□□□□ -1.17
TGFBR3-209ENST00000532540 PPP1R12AO14974 1030 aaPredicted RBP7.75□□□□□ -1.17
TGFBR3-209ENST00000532540 PSMA5P28066 241 aa7.75□□□□□ -1.17
TGFBR3-209ENST00000532540 HSPA4P34932 840 aa7.75□□□□□ -1.17
TGFBR3-209ENST00000532540 B4GALNT4Q76KP1 1039 aa7.75□□□□□ -1.17
TGFBR3-209ENST00000532540 RPAP2Q8IXW5 612 aaPredicted RBP7.75□□□□□ -1.17
TGFBR3-209ENST00000532540 SCLT1Q96NL6 688 aa7.75□□□□□ -1.17
TGFBR3-209ENST00000532540 CEP89Q96ST8 783 aa7.75□□□□□ -1.17
TGFBR3-209ENST00000532540 TRIM6Q9C030 488 aaPredicted RBP7.75□□□□□ -1.17
TGFBR3-209ENST00000532540 NUCKS1Q9H1E3 243 aaKnown RBP7.75□□□□□ -1.17
TGFBR3-209ENST00000532540 LRP2BPQ9P2M1 347 aa7.75□□□□□ -1.17
TGFBR3-209ENST00000532540 NRBP1Q9UHY1 535 aa7.75□□□□□ -1.17
TGFBR3-209ENST00000532540 ODF2LQ9ULJ1 636 aa7.75□□□□□ -1.17
TGFBR3-209ENST00000532540 MAP3K15Q6ZN16 1313 aa7.75□□□□□ -1.17
TGFBR3-209ENST00000532540 ZNF521Q96K83 1311 aa7.75□□□□□ -1.17
TGFBR3-209ENST00000532540 KDRP35968 1356 aa7.74□□□□□ -1.17
TGFBR3-209ENST00000532540 ANKRD65E5RJM6 399 aa7.74□□□□□ -1.17
TGFBR3-209ENST00000532540 RPS6KA4O75676 772 aa7.74□□□□□ -1.17
TGFBR3-209ENST00000532540 IL6STP40189 918 aaPredicted RBP7.74□□□□□ -1.17
TGFBR3-209ENST00000532540 MMP14P50281 582 aa7.74□□□□□ -1.17
TGFBR3-209ENST00000532540 NFIXQ14938 502 aa7.74□□□□□ -1.17
TGFBR3-209ENST00000532540 ZKSCAN8Q15776 578 aaPredicted RBP7.74□□□□□ -1.17
TGFBR3-209ENST00000532540 LRRC8AQ8IWT6 810 aa7.74□□□□□ -1.17
TGFBR3-209ENST00000532540 NUP133Q8WUM0 1156 aa7.74□□□□□ -1.17
TGFBR3-209ENST00000532540 ZCCHC17Q9NP64 241 aaKnown RBP7.74□□□□□ -1.17
TGFBR3-209ENST00000532540 SH2B1Q9NRF2 756 aaPredicted RBP7.74□□□□□ -1.17
TGFBR3-209ENST00000532540 GJA3Q9Y6H8 435 aa7.74□□□□□ -1.17
TGFBR3-209ENST00000532540 CAPN7Q9Y6W3 813 aa7.74□□□□□ -1.17
TGFBR3-209ENST00000532540 TMCO5BA8MYB1 307 aa7.74□□□□□ -1.17
TGFBR3-209ENST00000532540 GJB2P29033 226 aa7.74□□□□□ -1.17
TGFBR3-209ENST00000532540 FOSBP53539 338 aa7.74□□□□□ -1.17
TGFBR3-209ENST00000532540 BRD3Q15059 726 aa7.74□□□□□ -1.17
TGFBR3-209ENST00000532540 GIGYF2Q6Y7W6 1299 aaKnown RBP7.74□□□□□ -1.17
TGFBR3-209ENST00000532540 COL23A1Q86Y22 540 aaPredicted RBP7.74□□□□□ -1.17
TGFBR3-209ENST00000532540 C2CD5Q86YS7 1000 aa7.74□□□□□ -1.17
TGFBR3-209ENST00000532540 N4BP2L2Q92802 583 aaPredicted RBP7.74□□□□□ -1.17
TGFBR3-209ENST00000532540 CCDC114Q96M63 670 aa7.74□□□□□ -1.17
TGFBR3-209ENST00000532540 SUDS3Q9H7L9 328 aaPredicted RBP7.74□□□□□ -1.17
TGFBR3-209ENST00000532540 INCENPQ9NQS7 918 aa7.74□□□□□ -1.17
TGFBR3-209ENST00000532540 HOOK1Q9UJC3 728 aaKnown RBP7.74□□□□□ -1.17
TGFBR3-209ENST00000532540 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.74□□□□□ -1.17
TGFBR3-209ENST00000532540 H0YIN7 160 aa7.74□□□□□ -1.17
TGFBR3-209ENST00000532540 KIF3CO14782 793 aa7.74□□□□□ -1.17
TGFBR3-209ENST00000532540 NAP1L1P55209 391 aaKnown RBP7.74□□□□□ -1.17
TGFBR3-209ENST00000532540 ETF1P62495 437 aaKnown RBP7.74□□□□□ -1.17
TGFBR3-209ENST00000532540 TFCP2Q12800 502 aa7.74□□□□□ -1.17
TGFBR3-209ENST00000532540 DOK7Q18PE1 504 aa7.74□□□□□ -1.17
TGFBR3-209ENST00000532540 LRRC24Q50LG9 513 aa7.74□□□□□ -1.17
TGFBR3-209ENST00000532540 EPHA10Q5JZY3 1008 aa7.74□□□□□ -1.17
TGFBR3-209ENST00000532540 ARHGAP27Q6ZUM4 889 aa7.74□□□□□ -1.17
TGFBR3-209ENST00000532540 TRMT2AQ8IZ69 625 aaKnown RBP7.74□□□□□ -1.17
TGFBR3-209ENST00000532540 CCDC148Q8NFR7 591 aa7.74□□□□□ -1.17
TGFBR3-209ENST00000532540 CTCFLQ8NI51 663 aaPredicted RBP7.74□□□□□ -1.17
TGFBR3-209ENST00000532540 FAM76AQ8TAV0 307 aa7.74□□□□□ -1.17
TGFBR3-209ENST00000532540 CABS1Q96KC9 395 aa7.74□□□□□ -1.17
TGFBR3-209ENST00000532540 CDC5LQ99459 802 aaKnown RBP7.74□□□□□ -1.17
TGFBR3-209ENST00000532540 MED4Q9NPJ6 270 aa7.74□□□□□ -1.17
TGFBR3-209ENST00000532540 EP400Q96L91 3159 aa7.74□□□□□ -1.17
TGFBR3-209ENST00000532540 ZBTB7BO15156 539 aaPredicted RBP7.73□□□□□ -1.17
TGFBR3-209ENST00000532540 IGKV5-2P06315 115 aa7.73□□□□□ -1.17
TGFBR3-209ENST00000532540 SYT1P21579 422 aa7.73□□□□□ -1.17
TGFBR3-209ENST00000532540 PEX19P40855 299 aa7.73□□□□□ -1.17
TGFBR3-209ENST00000532540 BEND3Q5T5X7 828 aa7.73□□□□□ -1.17
TGFBR3-209ENST00000532540 PPFIBP1Q86W92 1011 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms