RNA–Protein interactions for RNA: ENST00000532146.1

CELF1-216, Transcript of CUGBP Elav-like family member 1, humanhuman

TSL 3

Gene CELF1, Length 473 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF1-216ENST00000532146 ZKSCAN2Q63HK3 967 aa6.2□□□□□ -1.42
CELF1-216ENST00000532146 FRAT1Q92837 279 aaPredicted RBP6.2□□□□□ -1.42
CELF1-216ENST00000532146 VTI1AQ96AJ9 217 aa6.2□□□□□ -1.42
CELF1-216ENST00000532146 PSMG3-AS1Q96PY0 264 aa6.2□□□□□ -1.42
CELF1-216ENST00000532146 PNNQ9H307 717 aaKnown RBP6.2□□□□□ -1.42
CELF1-216ENST00000532146 USP35Q9P2H5 1018 aa6.2□□□□□ -1.42
CELF1-216ENST00000532146 PIK3R4Q99570 1358 aa6.19□□□□□ -1.42
CELF1-216ENST00000532146 TNFRSF10BO14763 440 aa6.19□□□□□ -1.42
CELF1-216ENST00000532146 U2SURPO15042 1029 aaKnown RBP6.19□□□□□ -1.42
CELF1-216ENST00000532146 MICAL2O94851 1124 aa6.19□□□□□ -1.42
CELF1-216ENST00000532146 DEKP35659 375 aaKnown RBP6.19□□□□□ -1.42
CELF1-216ENST00000532146 IDH3AP50213 366 aa6.19□□□□□ -1.42
CELF1-216ENST00000532146 KANK3Q6NY19 840 aa6.19□□□□□ -1.42
CELF1-216ENST00000532146 LINC00114Q6XXX2 140 aa6.19□□□□□ -1.42
CELF1-216ENST00000532146 IFT43Q96FT9 208 aa6.19□□□□□ -1.42
CELF1-216ENST00000532146 AVENQ9NQS1 362 aaPredicted RBP6.19□□□□□ -1.42
CELF1-216ENST00000532146 SMC4Q9NTJ3 1288 aa6.19□□□□□ -1.42
CELF1-216ENST00000532146 TNNQ9UQP3 1299 aa6.19□□□□□ -1.42
CELF1-216ENST00000532146 CACNA1FO60840 1977 aa6.18□□□□□ -1.42
CELF1-216ENST00000532146 TUBGCP6Q96RT7 1819 aa6.18□□□□□ -1.42
CELF1-216ENST00000532146 ADAM23O75077 832 aa6.18□□□□□ -1.42
CELF1-216ENST00000532146 SIN3BO75182 1162 aa6.18□□□□□ -1.42
CELF1-216ENST00000532146 EXOSC9Q06265 439 aaKnown RBP6.18□□□□□ -1.42
CELF1-216ENST00000532146 CHSY3Q70JA7 882 aa6.18□□□□□ -1.42
CELF1-216ENST00000532146 ETFBKMTQ8IXQ9 262 aa6.18□□□□□ -1.42
CELF1-216ENST00000532146 FTSJ3Q8IY81 847 aaKnown RBP6.18□□□□□ -1.42
CELF1-216ENST00000532146 DZIP1LQ8IYY4 767 aaKnown RBP6.18□□□□□ -1.42
CELF1-216ENST00000532146 TSR2Q969E8 191 aaKnown RBP6.18□□□□□ -1.42
CELF1-216ENST00000532146 SCARF2Q96GP6 870 aaPredicted RBP6.18□□□□□ -1.42
CELF1-216ENST00000532146 ARID3AQ99856 593 aa6.18□□□□□ -1.42
CELF1-216ENST00000532146 BCL2L13Q9BXK5 485 aa6.18□□□□□ -1.42
CELF1-216ENST00000532146 GSX2Q9BZM3 304 aa6.18□□□□□ -1.42
CELF1-216ENST00000532146 RRAGCQ9HB90 399 aa6.18□□□□□ -1.42
CELF1-216ENST00000532146 SEPT3Q9UH03 358 aa6.18□□□□□ -1.42
CELF1-216ENST00000532146 DDX19BQ9UMR2 479 aa6.18□□□□□ -1.42
CELF1-216ENST00000532146 USP19O94966 1318 aa6.18□□□□□ -1.42
CELF1-216ENST00000532146 LTN1O94822 1766 aa6.18□□□□□ -1.42
CELF1-216ENST00000532146 USP6P35125 1406 aa6.17□□□□□ -1.42
CELF1-216ENST00000532146 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.17□□□□□ -1.42
CELF1-216ENST00000532146 TRIM27P14373 513 aa6.17□□□□□ -1.42
CELF1-216ENST00000532146 AMPD1P23109 780 aa6.17□□□□□ -1.42
CELF1-216ENST00000532146 ATP2B4P23634 1241 aa6.17□□□□□ -1.42
CELF1-216ENST00000532146 HIF1AQ16665 826 aa6.17□□□□□ -1.42
CELF1-216ENST00000532146 ALDH1L2Q3SY69 923 aa6.17□□□□□ -1.42
CELF1-216ENST00000532146 BEND7Q8N7W2 519 aaPredicted RBP6.17□□□□□ -1.42
CELF1-216ENST00000532146 BHMTQ93088 406 aa6.17□□□□□ -1.42
CELF1-216ENST00000532146 ZNF428Q96B54 188 aa6.17□□□□□ -1.42
CELF1-216ENST00000532146 BCL11AQ9H165 835 aa6.17□□□□□ -1.42
CELF1-216ENST00000532146 RWDD1Q9H446 243 aaPredicted RBP6.17□□□□□ -1.42
CELF1-216ENST00000532146 SUV39H2Q9H5I1 410 aa6.17□□□□□ -1.42
CELF1-216ENST00000532146 POLKQ9UBT6 870 aa6.17□□□□□ -1.42
CELF1-216ENST00000532146 STARD13Q9Y3M8 1113 aa6.17□□□□□ -1.42
CELF1-216ENST00000532146 LAS1LQ9Y4W2 734 aaKnown RBP6.17□□□□□ -1.42
CELF1-216ENST00000532146 CEP170BQ9Y4F5 1589 aaPredicted RBP6.17□□□□□ -1.42
CELF1-216ENST00000532146 PHRF1Q9P1Y6 1649 aaKnown RBP6.17□□□□□ -1.42
CELF1-216ENST00000532146 ROBO2Q9HCK4 1378 aa6.17□□□□□ -1.42
CELF1-216ENST00000532146 ELOA3CA0A087WX78 387 aaPredicted RBP6.16□□□□□ -1.42
CELF1-216ENST00000532146 ELOA3DA6NLF2 546 aaPredicted RBP6.16□□□□□ -1.42
CELF1-216ENST00000532146 NEFMP07197 916 aa6.16□□□□□ -1.42
CELF1-216ENST00000532146 PRKAR2BP31323 418 aa6.16□□□□□ -1.42
CELF1-216ENST00000532146 DGKGP49619 791 aa6.16□□□□□ -1.42
CELF1-216ENST00000532146 RIPK4P57078 832 aa6.16□□□□□ -1.42
CELF1-216ENST00000532146 CALD1Q05682 793 aaKnown RBP6.16□□□□□ -1.42
CELF1-216ENST00000532146 HDAC1Q13547 482 aaPredicted RBP6.16□□□□□ -1.42
CELF1-216ENST00000532146 NFE2L2Q16236 605 aa6.16□□□□□ -1.42
CELF1-216ENST00000532146 ELOA3BQ3SY89 546 aa6.16□□□□□ -1.42
CELF1-216ENST00000532146 C16orf46Q6P387 395 aa6.16□□□□□ -1.42
CELF1-216ENST00000532146 ATF7IPQ6VMQ6 1270 aa6.16□□□□□ -1.42
CELF1-216ENST00000532146 WAPLQ7Z5K2 1190 aa6.16□□□□□ -1.42
CELF1-216ENST00000532146 TREML1Q86YW5 311 aa6.16□□□□□ -1.42
CELF1-216ENST00000532146 ELOA3Q8NG57 546 aa6.16□□□□□ -1.42
CELF1-216ENST00000532146 SSH1Q8WYL5 1049 aa6.16□□□□□ -1.42
CELF1-216ENST00000532146 COL26A1Q96A83 441 aa6.16□□□□□ -1.42
CELF1-216ENST00000532146 KRTAP9-2Q9BYQ4 174 aa6.16□□□□□ -1.42
CELF1-216ENST00000532146 ZFATQ9P243 1243 aa6.16□□□□□ -1.42
CELF1-216ENST00000532146 PRR36Q9H6K5 1346 aa6.16□□□□□ -1.42
CELF1-216ENST00000532146 SSH2Q76I76 1423 aa6.16□□□□□ -1.42
CELF1-216ENST00000532146 PTPRUQ92729 1446 aa6.16□□□□□ -1.42
CELF1-216ENST00000532146 CHD2O14647 1828 aaKnown RBP6.15□□□□□ -1.42
CELF1-216ENST00000532146 ADARB2-AS1A8MUL3 147 aa6.15□□□□□ -1.42
CELF1-216ENST00000532146 ZBTB39O15060 712 aa6.15□□□□□ -1.42
CELF1-216ENST00000532146 COL8A1P27658 744 aa6.15□□□□□ -1.42
CELF1-216ENST00000532146 IL13P35225 146 aa6.15□□□□□ -1.42
CELF1-216ENST00000532146 ARSDP51689 593 aa6.15□□□□□ -1.42
CELF1-216ENST00000532146 LMOD3Q0VAK6 560 aa6.15□□□□□ -1.42
CELF1-216ENST00000532146 PHLDB3Q6NSJ2 640 aa6.15□□□□□ -1.42
CELF1-216ENST00000532146 C8orf86Q6ZUL3 223 aa6.15□□□□□ -1.42
CELF1-216ENST00000532146 NME9Q86XW9 330 aa6.15□□□□□ -1.42
CELF1-216ENST00000532146 ITPRIPQ8IWB1 547 aa6.15□□□□□ -1.42
CELF1-216ENST00000532146 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.15□□□□□ -1.42
CELF1-216ENST00000532146 TNFRSF25Q93038 417 aa6.15□□□□□ -1.42
CELF1-216ENST00000532146 IFT57Q9NWB7 429 aa6.15□□□□□ -1.42
CELF1-216ENST00000532146 USP31Q70CQ4 1352 aa6.15□□□□□ -1.43
CELF1-216ENST00000532146 ANKARQ7Z5J8 1434 aa6.15□□□□□ -1.43
CELF1-216ENST00000532146 MSTNO14793 375 aa6.14□□□□□ -1.43
CELF1-216ENST00000532146 IPO8O15397 1037 aaKnown RBP6.14□□□□□ -1.43
CELF1-216ENST00000532146 ITGB2P05107 769 aa6.14□□□□□ -1.43
CELF1-216ENST00000532146 NFKB1P19838 968 aa6.14□□□□□ -1.43
CELF1-216ENST00000532146 TARSP26639 723 aaKnown RBP6.14□□□□□ -1.43
CELF1-216ENST00000532146 SSFA2P28290 1259 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms