RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 CYP7A1P22680 504 aa25.84■■□□□ 1.73
CAPN1-220ENST00000530567 CDC42EP5Q6NZY7 148 aa25.84■■□□□ 1.73
CAPN1-220ENST00000530567 TMED8Q6PL24 325 aaPredicted RBP25.84■■□□□ 1.73
CAPN1-220ENST00000530567 SCAF8Q9UPN6 1271 aaKnown RBP25.84■■□□□ 1.73
CAPN1-220ENST00000530567 RFX7Q2KHR2 1363 aa25.84■■□□□ 1.73
CAPN1-220ENST00000530567 MYO1BO43795 1136 aa25.83■■□□□ 1.73
CAPN1-220ENST00000530567 GSPT1P15170 499 aaKnown RBP25.83■■□□□ 1.73
CAPN1-220ENST00000530567 CNTROBQ8N137 903 aa25.83■■□□□ 1.73
CAPN1-220ENST00000530567 GLIS2Q9BZE0 524 aaPredicted RBP25.83■■□□□ 1.73
CAPN1-220ENST00000530567 ZNF532Q9HCE3 1301 aa25.83■■□□□ 1.73
CAPN1-220ENST00000530567 ITGBL1O95965 494 aaPredicted RBP25.82■■□□□ 1.72
CAPN1-220ENST00000530567 RHBDL3P58872 404 aa25.82■■□□□ 1.72
CAPN1-220ENST00000530567 TTC22Q5TAA0 569 aa25.82■■□□□ 1.72
CAPN1-220ENST00000530567 DCPSQ96C86 337 aaKnown RBP25.82■■□□□ 1.72
CAPN1-220ENST00000530567 EVI5LQ96CN4 794 aa25.82■■□□□ 1.72
CAPN1-220ENST00000530567 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.82■■□□□ 1.721e-7■■■■□ 21.6
CAPN1-220ENST00000530567 ADM5C9JUS6 153 aa25.81■■□□□ 1.72
CAPN1-220ENST00000530567 CACNB3P54284 484 aa25.81■■□□□ 1.72
CAPN1-220ENST00000530567 KRT26Q7Z3Y9 468 aa25.81■■□□□ 1.72
CAPN1-220ENST00000530567 PPP4CP60510 307 aa25.8■■□□□ 1.72
CAPN1-220ENST00000530567 FSTL1Q12841 308 aa25.8■■□□□ 1.72
CAPN1-220ENST00000530567 UBE3CQ15386 1083 aa25.8■■□□□ 1.72
CAPN1-220ENST00000530567 DLK2Q6UY11 383 aa25.8■■□□□ 1.72
CAPN1-220ENST00000530567 APOBEC3FQ8IUX4 373 aaKnown RBP25.8■■□□□ 1.72
CAPN1-220ENST00000530567 VEZTQ9HBM0 779 aa25.8■■□□□ 1.72
CAPN1-220ENST00000530567 USP40Q9NVE5 1235 aa25.8■■□□□ 1.72
CAPN1-220ENST00000530567 AATFQ9NY61 560 aaKnown RBP eCLIP25.8■■□□□ 1.72
CAPN1-220ENST00000530567 CDC37L1Q7L3B6 337 aa25.8■■□□□ 1.72
CAPN1-220ENST00000530567 USP48Q86UV5 1035 aa25.8■■□□□ 1.72
CAPN1-220ENST00000530567 SULF1Q8IWU6 871 aa25.8■■□□□ 1.72
CAPN1-220ENST00000530567 MIGA1Q8NAN2 632 aa25.8■■□□□ 1.72
CAPN1-220ENST00000530567 FSD1Q9BTV5 496 aa25.8■■□□□ 1.72
CAPN1-220ENST00000530567 TRAF5O00463 557 aa25.79■■□□□ 1.72
CAPN1-220ENST00000530567 WDHD1O75717 1129 aaPredicted RBP25.79■■□□□ 1.72
CAPN1-220ENST00000530567 NFIAQ12857 509 aa25.79■■□□□ 1.72
CAPN1-220ENST00000530567 FKBP1CQ5VVH2 108 aa25.79■■□□□ 1.72
CAPN1-220ENST00000530567 ZSCAN25Q6NSZ9 544 aa25.79■■□□□ 1.72
CAPN1-220ENST00000530567 RIOK1Q9BRS2 568 aaKnown RBP25.79■■□□□ 1.72
CAPN1-220ENST00000530567 CNTNAP1P78357 1384 aa25.79■■□□□ 1.72
CAPN1-220ENST00000530567 CDK5RAP2Q96SN8 1893 aa25.78■■□□□ 1.72
CAPN1-220ENST00000530567 AK9Q5TCS8 1911 aa25.78■■□□□ 1.72
CAPN1-220ENST00000530567 PASKQ96RG2 1323 aa25.78■■□□□ 1.72
CAPN1-220ENST00000530567 DYNLL1P63167 89 aaKnown RBP25.78■■□□□ 1.72
CAPN1-220ENST00000530567 FMR1Q06787 632 aaKnown RBP eCLIP25.78■■□□□ 1.722e-6■■■■□ 25.8
CAPN1-220ENST00000530567 SH3RF3Q8TEJ3 882 aaPredicted RBP25.78■■□□□ 1.72
CAPN1-220ENST00000530567 TRIM6-TRIM34B2RNG4 842 aa25.77■■□□□ 1.72
CAPN1-220ENST00000530567 TCP10L2B9ZVM9 353 aa25.77■■□□□ 1.72
CAPN1-220ENST00000530567 RNF113AO15541 343 aaKnown RBP25.77■■□□□ 1.72
CAPN1-220ENST00000530567 FOCADQ5VW36 1801 aa25.76■■□□□ 1.71
CAPN1-220ENST00000530567 BAG3O95817 575 aa25.76■■□□□ 1.71
CAPN1-220ENST00000530567 ZFYP08048 801 aaPredicted RBP25.76■■□□□ 1.71
CAPN1-220ENST00000530567 RILPL2Q969X0 211 aa25.76■■□□□ 1.71
CAPN1-220ENST00000530567 IDI2Q9BXS1 227 aa25.76■■□□□ 1.71
CAPN1-220ENST00000530567 DEFB129Q9H1M3 183 aa25.76■■□□□ 1.71
CAPN1-220ENST00000530567 TMOD2Q9NZR1 351 aa25.76■■□□□ 1.71
CAPN1-220ENST00000530567 FAM198AQ9UFP1 575 aa25.76■■□□□ 1.71
CAPN1-220ENST00000530567 SDSP20132 328 aa25.75■■□□□ 1.71
CAPN1-220ENST00000530567 RGS3P49796 1198 aa25.75■■□□□ 1.71
CAPN1-220ENST00000530567 RASA3Q14644 834 aa25.75■■□□□ 1.71
CAPN1-220ENST00000530567 APPBP2Q92624 585 aa25.75■■□□□ 1.71
CAPN1-220ENST00000530567 NOL10Q9BSC4 688 aaKnown RBP25.75■■□□□ 1.71
CAPN1-220ENST00000530567 PUS7LQ9H0K6 701 aaKnown RBP25.75■■□□□ 1.71
CAPN1-220ENST00000530567 DDX4Q9NQI0 724 aaKnown RBP25.75■■□□□ 1.71
CAPN1-220ENST00000530567 MAGEB6P1A0A0J9YX57 407 aa25.74■■□□□ 1.71
CAPN1-220ENST00000530567 PLCG2P16885 1265 aa25.74■■□□□ 1.71
CAPN1-220ENST00000530567 TNFAIP1Q13829 316 aa25.74■■□□□ 1.71
CAPN1-220ENST00000530567 FAM83AQ86UY5 434 aa25.74■■□□□ 1.71
CAPN1-220ENST00000530567 OSBP2Q969R2 916 aa25.74■■□□□ 1.71
CAPN1-220ENST00000530567 LRRFIP1Q32MZ4 808 aaKnown RBP25.73■■□□□ 1.71
CAPN1-220ENST00000530567 ZMYM1Q5SVZ6 1142 aa25.73■■□□□ 1.71
CAPN1-220ENST00000530567 PRAMEF18Q5VWM3 479 aa25.73■■□□□ 1.71
CAPN1-220ENST00000530567 TICAM2Q86XR7 235 aa25.73■■□□□ 1.71
CAPN1-220ENST00000530567 CDAN1Q8IWY9 1227 aa25.73■■□□□ 1.71
CAPN1-220ENST00000530567 TEX11Q8IYF3 940 aa25.73■■□□□ 1.71
CAPN1-220ENST00000530567 LCORLQ8N3X6 602 aa25.73■■□□□ 1.71
CAPN1-220ENST00000530567 CDCA5Q96FF9 252 aa25.73■■□□□ 1.71
CAPN1-220ENST00000530567 PPP2R3BQ9Y5P8 575 aa25.73■■□□□ 1.71
CAPN1-220ENST00000530567 TRPM7Q96QT4 1865 aa25.72■■□□□ 1.71
CAPN1-220ENST00000530567 MBD4O95243 580 aa25.72■■□□□ 1.71
CAPN1-220ENST00000530567 CERS3Q8IU89 383 aa25.72■■□□□ 1.71
CAPN1-220ENST00000530567 ZFPM1Q8IX07 1006 aa25.72■■□□□ 1.71
CAPN1-220ENST00000530567 TEPSINQ96N21 525 aa25.72■■□□□ 1.71
CAPN1-220ENST00000530567 TMEM39BQ9GZU3 492 aa25.72■■□□□ 1.71
CAPN1-220ENST00000530567 SSC5DA1L4H1 1573 aa25.72■■□□□ 1.71
CAPN1-220ENST00000530567 NPM3O75607 178 aaKnown RBP25.71■■□□□ 1.71
CAPN1-220ENST00000530567 ARMT1Q9H993 441 aa25.71■■□□□ 1.71
CAPN1-220ENST00000530567 RPAP1Q9BWH6 1393 aaPredicted RBP25.71■■□□□ 1.71
CAPN1-220ENST00000530567 M0R2C6 588 aa25.71■■□□□ 1.71
CAPN1-220ENST00000530567 TNNI2P48788 182 aa25.71■■□□□ 1.71
CAPN1-220ENST00000530567 TCP10Q12799 353 aa25.71■■□□□ 1.71
CAPN1-220ENST00000530567 FAM151AQ8WW52 585 aa25.71■■□□□ 1.71
CAPN1-220ENST00000530567 SEC62Q99442 399 aaKnown RBP25.71■■□□□ 1.71
CAPN1-220ENST00000530567 DDX60LQ5H9U9 1706 aaKnown RBP25.7■■□□□ 1.7
CAPN1-220ENST00000530567 ENTPD3O75355 529 aa25.7■■□□□ 1.7
CAPN1-220ENST00000530567 C1QTNF8P60827 252 aa25.7■■□□□ 1.7
CAPN1-220ENST00000530567 PICALMQ13492 652 aa25.7■■□□□ 1.7
CAPN1-220ENST00000530567 FLT1P17948 1338 aa25.69■■□□□ 1.7
CAPN1-220ENST00000530567 SH3BP5LQ7L8J4 393 aa25.69■■□□□ 1.7
CAPN1-220ENST00000530567 TGFBRAP1Q8WUH2 860 aa25.69■■□□□ 1.7
CAPN1-220ENST00000530567 FAM227BQ96M60 508 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms