RNA–Protein interactions for RNA: ENST00000529724.1

PPP1CA-206, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 2

Gene PPP1CA, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-206ENST00000529724 SYNGAP1Q96PV0 1343 aa13.56□□□□□ -0.24
PPP1CA-206ENST00000529724 TNPO2O14787 897 aaKnown RBP13.55□□□□□ -0.24
PPP1CA-206ENST00000529724 INPP5BP32019 993 aa13.55□□□□□ -0.24
PPP1CA-206ENST00000529724 USP38Q8NB14 1042 aa13.55□□□□□ -0.24
PPP1CA-206ENST00000529724 METTL22Q9BUU2 404 aaPredicted RBP13.55□□□□□ -0.24
PPP1CA-206ENST00000529724 OGDHLQ9ULD0 1010 aa13.55□□□□□ -0.24
PPP1CA-206ENST00000529724 TTF2Q9UNY4 1162 aaKnown RBP13.55□□□□□ -0.24
PPP1CA-206ENST00000529724 COL6A1P12109 1028 aa13.54□□□□□ -0.24
PPP1CA-206ENST00000529724 FOSL2P15408 326 aa13.54□□□□□ -0.24
PPP1CA-206ENST00000529724 CACNB3P54284 484 aa13.54□□□□□ -0.24
PPP1CA-206ENST00000529724 TRIM32Q13049 653 aa13.54□□□□□ -0.24
PPP1CA-206ENST00000529724 ZNF804AQ7Z570 1209 aa13.54□□□□□ -0.24
PPP1CA-206ENST00000529724 TAOK2Q9UL54 1235 aa13.54□□□□□ -0.24
PPP1CA-206ENST00000529724 TAF5LO75529 589 aa13.53□□□□□ -0.24
PPP1CA-206ENST00000529724 IGKV5-2P06315 115 aa13.53□□□□□ -0.24
PPP1CA-206ENST00000529724 ITGA6P23229 1130 aa13.53□□□□□ -0.24
PPP1CA-206ENST00000529724 CRKP46108 304 aa13.53□□□□□ -0.24
PPP1CA-206ENST00000529724 LRRC26Q2I0M4 334 aa13.53□□□□□ -0.24
PPP1CA-206ENST00000529724 HMGCRP04035 888 aa13.52□□□□□ -0.25
PPP1CA-206ENST00000529724 MFSD14BQ5SR56 506 aa13.52□□□□□ -0.25
PPP1CA-206ENST00000529724 MPHOSPH8Q99549 860 aa13.52□□□□□ -0.25
PPP1CA-206ENST00000529724 A0A1B0GUL6 1792 aa13.52□□□□□ -0.25
PPP1CA-206ENST00000529724 TMPOP42166 694 aaKnown RBP13.51□□□□□ -0.25
PPP1CA-206ENST00000529724 GRIK5Q16478 980 aa13.51□□□□□ -0.25
PPP1CA-206ENST00000529724 DUSP27Q5VZP5 1158 aa13.51□□□□□ -0.25
PPP1CA-206ENST00000529724 ZNF341Q9BYN7 854 aa13.51□□□□□ -0.25
PPP1CA-206ENST00000529724 HMX1Q9NP08 348 aaPredicted RBP13.51□□□□□ -0.25
PPP1CA-206ENST00000529724 ZNF112Q9UJU3 913 aa13.51□□□□□ -0.25
PPP1CA-206ENST00000529724 DNAH12Q6ZR08 3092 aa13.5□□□□□ -0.25
PPP1CA-206ENST00000529724 RPAP1Q9BWH6 1393 aaPredicted RBP13.5□□□□□ -0.25
PPP1CA-206ENST00000529724 CLSPNQ9HAW4 1339 aa13.5□□□□□ -0.25
PPP1CA-206ENST00000529724 LMOD3Q0VAK6 560 aa13.5□□□□□ -0.25
PPP1CA-206ENST00000529724 DCAF15Q66K64 600 aa13.5□□□□□ -0.25
PPP1CA-206ENST00000529724 MIGA2Q7L4E1 593 aa13.5□□□□□ -0.25
PPP1CA-206ENST00000529724 FAM83AQ86UY5 434 aa13.5□□□□□ -0.25
PPP1CA-206ENST00000529724 HOOK2Q96ED9 719 aa13.5□□□□□ -0.25
PPP1CA-206ENST00000529724 PNNQ9H307 717 aaKnown RBP13.5□□□□□ -0.25
PPP1CA-206ENST00000529724 LAS1LQ9Y4W2 734 aaKnown RBP13.5□□□□□ -0.25
PPP1CA-206ENST00000529724 MUC6Q6W4X9 2439 aa13.49□□□□□ -0.25
PPP1CA-206ENST00000529724 CXCL11O14625 94 aa13.49□□□□□ -0.25
PPP1CA-206ENST00000529724 NOL9Q5SY16 702 aaKnown RBP13.49□□□□□ -0.25
PPP1CA-206ENST00000529724 TDRD7Q8NHU6 1098 aaKnown RBP13.49□□□□□ -0.25
PPP1CA-206ENST00000529724 COA7Q96BR5 231 aa13.49□□□□□ -0.25
PPP1CA-206ENST00000529724 PLA2G12BQ9BX93 195 aa13.49□□□□□ -0.25
PPP1CA-206ENST00000529724 A0A0G2JLL6 359 aaPredicted RBP13.48□□□□□ -0.25
PPP1CA-206ENST00000529724 H7C1W4 665 aa13.48□□□□□ -0.25
PPP1CA-206ENST00000529724 CSF1RP07333 972 aa13.48□□□□□ -0.25
PPP1CA-206ENST00000529724 SMAD3P84022 425 aaKnown RBP13.48□□□□□ -0.25
PPP1CA-206ENST00000529724 SHHQ15465 462 aa13.48□□□□□ -0.25
PPP1CA-206ENST00000529724 C9orf50Q5SZB4 431 aa13.48□□□□□ -0.25
PPP1CA-206ENST00000529724 MAP3K21Q5TCX8 1036 aa13.48□□□□□ -0.25
PPP1CA-206ENST00000529724 FKBP1CQ5VVH2 108 aa13.48□□□□□ -0.25
PPP1CA-206ENST00000529724 UBE3BQ7Z3V4 1068 aa13.48□□□□□ -0.25
PPP1CA-206ENST00000529724 PRRT2Q7Z6L0 340 aaPredicted RBP13.48□□□□□ -0.25
PPP1CA-206ENST00000529724 LBHD1Q9BQE6 289 aaPredicted RBP13.48□□□□□ -0.25
PPP1CA-206ENST00000529724 GJD2Q9UKL4 321 aa13.48□□□□□ -0.25
PPP1CA-206ENST00000529724 MAP3K2Q9Y2U5 619 aa13.48□□□□□ -0.25
PPP1CA-206ENST00000529724 SLC45A1Q9Y2W3 748 aa13.48□□□□□ -0.25
PPP1CA-206ENST00000529724 ARIH1Q9Y4X5 557 aaPredicted RBP13.48□□□□□ -0.25
PPP1CA-206ENST00000529724 CWF19L2Q2TBE0 894 aaKnown RBP13.47□□□□□ -0.25
PPP1CA-206ENST00000529724 ADAMTS19Q8TE59 1207 aa13.47□□□□□ -0.25
PPP1CA-206ENST00000529724 TRIB2Q92519 343 aa13.47□□□□□ -0.25
PPP1CA-206ENST00000529724 LTBP2Q14767 1821 aa13.47□□□□□ -0.25
PPP1CA-206ENST00000529724 MAST2Q6P0Q8 1798 aa13.47□□□□□ -0.25
PPP1CA-206ENST00000529724 FASTKD5Q7L8L6 764 aaKnown RBP13.46□□□□□ -0.25
PPP1CA-206ENST00000529724 ANKRD13CQ8N6S4 541 aa13.46□□□□□ -0.25
PPP1CA-206ENST00000529724 TRIM35Q9UPQ4 493 aa13.46□□□□□ -0.25
PPP1CA-206ENST00000529724 NEURL1BA8MQ27 555 aa13.45□□□□□ -0.26
PPP1CA-206ENST00000529724 CASP7P55210 303 aa13.45□□□□□ -0.26
PPP1CA-206ENST00000529724 HDLBPQ00341 1268 aaKnown RBP13.45□□□□□ -0.26
PPP1CA-206ENST00000529724 FAM110CQ1W6H9 321 aa13.45□□□□□ -0.26
PPP1CA-206ENST00000529724 APOBEC3HQ6NTF7 200 aaKnown RBP13.45□□□□□ -0.26
PPP1CA-206ENST00000529724 SMCR8Q8TEV9 937 aaPredicted RBP13.45□□□□□ -0.26
PPP1CA-206ENST00000529724 SNX27Q96L92 541 aa13.45□□□□□ -0.26
PPP1CA-206ENST00000529724 ZDHHC15Q96MV8 337 aa13.45□□□□□ -0.26
PPP1CA-206ENST00000529724 PLXNB2O15031 1838 aa13.44□□□□□ -0.26
PPP1CA-206ENST00000529724 PI4KAP2A4QPH2 592 aa13.44□□□□□ -0.26
PPP1CA-206ENST00000529724 DDX58O95786 925 aaKnown RBP13.44□□□□□ -0.26
PPP1CA-206ENST00000529724 PRKAR2AP13861 404 aaKnown RBP13.44□□□□□ -0.26
PPP1CA-206ENST00000529724 GRIN2CQ14957 1233 aa13.44□□□□□ -0.26
PPP1CA-206ENST00000529724 LHX8Q68G74 356 aa13.44□□□□□ -0.26
PPP1CA-206ENST00000529724 GADL1Q6ZQY3 521 aa13.44□□□□□ -0.26
PPP1CA-206ENST00000529724 PI4KAP1Q8N8J0 262 aa13.44□□□□□ -0.26
PPP1CA-206ENST00000529724 ATXN2LQ8WWM7 1075 aaKnown RBP13.44□□□□□ -0.26
PPP1CA-206ENST00000529724 ASB2Q96Q27 587 aa13.44□□□□□ -0.26
PPP1CA-206ENST00000529724 UHRF1Q96T88 793 aaPredicted RBP13.44□□□□□ -0.26
PPP1CA-206ENST00000529724 TMOD2Q9NZR1 351 aa13.44□□□□□ -0.26
PPP1CA-206ENST00000529724 PTPRFP10586 1907 aa13.44□□□□□ -0.26
PPP1CA-206ENST00000529724 ANKRD18BA2A2Z9 1011 aa13.43□□□□□ -0.26
PPP1CA-206ENST00000529724 GYG1P46976 350 aa13.43□□□□□ -0.26
PPP1CA-206ENST00000529724 KSR2Q6VAB6 950 aa13.43□□□□□ -0.26
PPP1CA-206ENST00000529724 TEKT1Q969V4 418 aa13.43□□□□□ -0.26
PPP1CA-206ENST00000529724 FAM84BQ96KN1 310 aaPredicted RBP13.43□□□□□ -0.26
PPP1CA-206ENST00000529724 MBIPQ9NS73 344 aa13.43□□□□□ -0.26
PPP1CA-206ENST00000529724 AFG3L2Q9Y4W6 797 aa13.43□□□□□ -0.26
PPP1CA-206ENST00000529724 CACNA1AO00555 2505 aa13.42□□□□□ -0.26
PPP1CA-206ENST00000529724 NEUROD2Q15784 382 aa13.42□□□□□ -0.26
PPP1CA-206ENST00000529724 FAM151AQ8WW52 585 aa13.42□□□□□ -0.26
PPP1CA-206ENST00000529724 C1QTNF1Q9BXJ1 281 aa13.42□□□□□ -0.26
PPP1CA-206ENST00000529724 ZHX2Q9Y6X8 837 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms