RNA–Protein interactions for RNA: ENST00000529133.5

CAPN1-217, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-217ENST00000529133 CWC27Q6UX04 472 aaKnown RBP13.79□□□□□ -0.2
CAPN1-217ENST00000529133 LCORLQ8N3X6 602 aa13.79□□□□□ -0.2
CAPN1-217ENST00000529133 ZNF526Q8TF50 670 aaPredicted RBP13.79□□□□□ -0.2
CAPN1-217ENST00000529133 NOL10Q9BSC4 688 aaKnown RBP13.79□□□□□ -0.2
CAPN1-217ENST00000529133 HELLSQ9NRZ9 838 aa13.79□□□□□ -0.2
CAPN1-217ENST00000529133 AATFQ9NY61 560 aaKnown RBP eCLIP13.79□□□□□ -0.26e-6■■■■■ 54.7
CAPN1-217ENST00000529133 MYH7P12883 1935 aa13.79□□□□□ -0.2
CAPN1-217ENST00000529133 AK9Q5TCS8 1911 aa13.78□□□□□ -0.2
CAPN1-217ENST00000529133 WNT10BO00744 389 aa13.78□□□□□ -0.2
CAPN1-217ENST00000529133 BAG3O95817 575 aa13.78□□□□□ -0.2
CAPN1-217ENST00000529133 RHBDL3P58872 404 aa13.78□□□□□ -0.2
CAPN1-217ENST00000529133 NBPF9Q3BBW0 867 aa13.78□□□□□ -0.2
CAPN1-217ENST00000529133 CDC42EP5Q6NZY7 148 aa13.78□□□□□ -0.2
CAPN1-217ENST00000529133 CCDC129Q6ZRS4 1044 aa13.78□□□□□ -0.2
CAPN1-217ENST00000529133 SH3RF3Q8TEJ3 882 aaPredicted RBP13.78□□□□□ -0.2
CAPN1-217ENST00000529133 IL25Q9H293 177 aa13.78□□□□□ -0.2
CAPN1-217ENST00000529133 TAF1DQ9H5J8 278 aaPredicted RBP13.78□□□□□ -0.2
CAPN1-217ENST00000529133 ARMT1Q9H993 441 aa13.78□□□□□ -0.2
CAPN1-217ENST00000529133 RAD50Q92878 1312 aa13.78□□□□□ -0.2
CAPN1-217ENST00000529133 GPAA1O43292 621 aa13.77□□□□□ -0.21
CAPN1-217ENST00000529133 ASTN2O75129 1339 aaPredicted RBP13.77□□□□□ -0.21
CAPN1-217ENST00000529133 SCN4AP35499 1836 aa13.77□□□□□ -0.21
CAPN1-217ENST00000529133 HIRAP54198 1017 aaPredicted RBP13.77□□□□□ -0.21
CAPN1-217ENST00000529133 GOLGB1Q14789 3259 aaKnown RBP13.77□□□□□ -0.21
CAPN1-217ENST00000529133 SPDYE2Q495Y8 402 aa13.77□□□□□ -0.21
CAPN1-217ENST00000529133 MCMDC2Q4G0Z9 681 aa13.77□□□□□ -0.21
CAPN1-217ENST00000529133 CASC1Q6TDU7 716 aa13.77□□□□□ -0.21
CAPN1-217ENST00000529133 ZNF589Q86UQ0 364 aaPredicted RBP13.77□□□□□ -0.21
CAPN1-217ENST00000529133 RUFY2Q8WXA3 655 aa13.77□□□□□ -0.21
CAPN1-217ENST00000529133 AIDAQ96BJ3 306 aa13.77□□□□□ -0.21
CAPN1-217ENST00000529133 STRBPQ96SI9 672 aaKnown RBP13.77□□□□□ -0.21
CAPN1-217ENST00000529133 TDRD3Q9H7E2 651 aaKnown RBP13.77□□□□□ -0.21
CAPN1-217ENST00000529133 RRAGCQ9HB90 399 aa13.77□□□□□ -0.21
CAPN1-217ENST00000529133 NMRK2Q9NPI5 230 aa13.77□□□□□ -0.21
CAPN1-217ENST00000529133 USP40Q9NVE5 1235 aa13.77□□□□□ -0.21
CAPN1-217ENST00000529133 MYH2Q9UKX2 1941 aa13.76□□□□□ -0.21
CAPN1-217ENST00000529133 CCDC171Q6TFL3 1326 aa13.76□□□□□ -0.21
CAPN1-217ENST00000529133 CLRN2A0PK11 232 aa13.76□□□□□ -0.21
CAPN1-217ENST00000529133 VEGFAP15692 232 aaPredicted RBP13.76□□□□□ -0.21
CAPN1-217ENST00000529133 PLCG2P16885 1265 aa13.76□□□□□ -0.21
CAPN1-217ENST00000529133 USP50Q70EL3 339 aaPredicted RBP13.76□□□□□ -0.21
CAPN1-217ENST00000529133 CERS3Q8IU89 383 aa13.76□□□□□ -0.21
CAPN1-217ENST00000529133 TEX11Q8IYF3 940 aa13.76□□□□□ -0.21
CAPN1-217ENST00000529133 ESYT1Q9BSJ8 1104 aa13.76□□□□□ -0.21
CAPN1-217ENST00000529133 ZNF70Q9UC06 446 aaPredicted RBP13.76□□□□□ -0.21
CAPN1-217ENST00000529133 SGSM2O43147 1006 aa13.75□□□□□ -0.21
CAPN1-217ENST00000529133 MYO1BO43795 1136 aa13.75□□□□□ -0.21
CAPN1-217ENST00000529133 WDHD1O75717 1129 aaPredicted RBP13.75□□□□□ -0.21
CAPN1-217ENST00000529133 CACNB3P54284 484 aa13.75□□□□□ -0.21
CAPN1-217ENST00000529133 CRNKL1Q9BZJ0 848 aaKnown RBP13.75□□□□□ -0.21
CAPN1-217ENST00000529133 PRKAB2O43741 272 aa13.74□□□□□ -0.21
CAPN1-217ENST00000529133 NFIAQ12857 509 aa13.74□□□□□ -0.21
CAPN1-217ENST00000529133 EAPPQ56P03 285 aaPredicted RBP13.74□□□□□ -0.21
CAPN1-217ENST00000529133 ANGEL2Q5VTE6 544 aaKnown RBP13.74□□□□□ -0.21
CAPN1-217ENST00000529133 PNMA8AQ86V59 439 aaPredicted RBP13.74□□□□□ -0.21
CAPN1-217ENST00000529133 VEZTQ9HBM0 779 aa13.74□□□□□ -0.21
CAPN1-217ENST00000529133 GGA3Q9NZ52 723 aa13.74□□□□□ -0.21
CAPN1-217ENST00000529133 TMOD2Q9NZR1 351 aa13.74□□□□□ -0.21
CAPN1-217ENST00000529133 SLC4A4Q9Y6R1 1079 aa13.74□□□□□ -0.21
CAPN1-217ENST00000529133 FOXP2O15409 715 aa13.73□□□□□ -0.21
CAPN1-217ENST00000529133 GNAT2P19087 354 aa13.73□□□□□ -0.21
CAPN1-217ENST00000529133 YY1P25490 414 aa13.73□□□□□ -0.21
CAPN1-217ENST00000529133 MFAP1P55081 439 aaKnown RBP13.73□□□□□ -0.21
CAPN1-217ENST00000529133 C8orf34Q49A92 452 aa13.73□□□□□ -0.21
CAPN1-217ENST00000529133 VPS53Q5VIR6 699 aa13.73□□□□□ -0.21
CAPN1-217ENST00000529133 TGFBRAP1Q8WUH2 860 aa13.73□□□□□ -0.21
CAPN1-217ENST00000529133 SDR42E1Q8WUS8 393 aa13.73□□□□□ -0.21
CAPN1-217ENST00000529133 IDI2Q9BXS1 227 aa13.73□□□□□ -0.21
CAPN1-217ENST00000529133 GPBP1L1Q9HC44 474 aaPredicted RBP13.73□□□□□ -0.21
CAPN1-217ENST00000529133 FAM198AQ9UFP1 575 aa13.73□□□□□ -0.21
CAPN1-217ENST00000529133 CNTNAP1P78357 1384 aa13.72□□□□□ -0.21
CAPN1-217ENST00000529133 FLT1P17948 1338 aa13.72□□□□□ -0.21
CAPN1-217ENST00000529133 PITPNM2Q9BZ72 1349 aa13.72□□□□□ -0.21
CAPN1-217ENST00000529133 GSG1L2A8MUP6 293 aa13.72□□□□□ -0.21
CAPN1-217ENST00000529133 TCP10L2B9ZVM9 353 aa13.72□□□□□ -0.21
CAPN1-217ENST00000529133 POTEIP0CG38 1075 aa13.72□□□□□ -0.21
CAPN1-217ENST00000529133 POTEJP0CG39 1038 aa13.72□□□□□ -0.21
CAPN1-217ENST00000529133 USP5P45974 858 aa13.72□□□□□ -0.21
CAPN1-217ENST00000529133 PICALMQ13492 652 aa13.72□□□□□ -0.21
CAPN1-217ENST00000529133 FKBP1CQ5VVH2 108 aa13.72□□□□□ -0.21
CAPN1-217ENST00000529133 APOBEC3FQ8IUX4 373 aaKnown RBP13.72□□□□□ -0.21
CAPN1-217ENST00000529133 MAPKAPK5Q8IW41 473 aa13.72□□□□□ -0.21
CAPN1-217ENST00000529133 ZC3H15Q8WU90 426 aaKnown RBP13.72□□□□□ -0.21
CAPN1-217ENST00000529133 EPB41L4AQ9HCS5 686 aaPredicted RBP13.72□□□□□ -0.21
CAPN1-217ENST00000529133 DDX4Q9NQI0 724 aaKnown RBP13.72□□□□□ -0.21
CAPN1-217ENST00000529133 PGAP2Q9UHJ9 254 aa13.72□□□□□ -0.21
CAPN1-217ENST00000529133 RPAP1Q9BWH6 1393 aaPredicted RBP13.71□□□□□ -0.21
CAPN1-217ENST00000529133 ENTPD3O75355 529 aa13.71□□□□□ -0.21
CAPN1-217ENST00000529133 NPM3O75607 178 aaKnown RBP13.71□□□□□ -0.21
CAPN1-217ENST00000529133 HSPD1P10809 573 aaKnown RBP13.71□□□□□ -0.21
CAPN1-217ENST00000529133 DCP1AQ9NPI6 582 aaPredicted RBP13.71□□□□□ -0.21
CAPN1-217ENST00000529133 ATP8A2Q9NTI2 1148 aa13.71□□□□□ -0.21
CAPN1-217ENST00000529133 MKRN1Q9UHC7 482 aaKnown RBP13.71□□□□□ -0.21
CAPN1-217ENST00000529133 SCAF8Q9UPN6 1271 aaKnown RBP13.71□□□□□ -0.21
CAPN1-217ENST00000529133 ECM29Q5VYK3 1845 aa13.71□□□□□ -0.22
CAPN1-217ENST00000529133 DDX60LQ5H9U9 1706 aaKnown RBP13.7□□□□□ -0.22
CAPN1-217ENST00000529133 COL2A1P02458 1487 aaPredicted RBP13.7□□□□□ -0.22
CAPN1-217ENST00000529133 PATL2C9JE40 543 aaKnown RBP13.7□□□□□ -0.22
CAPN1-217ENST00000529133 APPP05067 770 aa13.7□□□□□ -0.22
CAPN1-217ENST00000529133 PTH1RQ03431 593 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms