RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 FAM177BA6PVY3 158 aa9.7□□□□□ -0.86
CSTF3-208ENST00000528865 IRS4O14654 1257 aaPredicted RBP9.7□□□□□ -0.86
CSTF3-208ENST00000528865 CUTAO60888 179 aa9.7□□□□□ -0.86
CSTF3-208ENST00000528865 CYP19A1P11511 503 aaPredicted RBP9.7□□□□□ -0.86
CSTF3-208ENST00000528865 PDE6AP16499 860 aa9.7□□□□□ -0.86
CSTF3-208ENST00000528865 CDC27P30260 824 aa9.7□□□□□ -0.86
CSTF3-208ENST00000528865 METAP2P50579 478 aaKnown RBP eCLIP9.7□□□□□ -0.86
CSTF3-208ENST00000528865 EVA1CP58658 441 aa9.7□□□□□ -0.86
CSTF3-208ENST00000528865 TPM4P67936 248 aa9.7□□□□□ -0.86
CSTF3-208ENST00000528865 DPCR1Q3MIW9 517 aa9.7□□□□□ -0.86
CSTF3-208ENST00000528865 PPP4R3BQ5MIZ7 849 aa9.7□□□□□ -0.86
CSTF3-208ENST00000528865 SLC9C2Q5TAH2 1124 aa9.7□□□□□ -0.86
CSTF3-208ENST00000528865 UTP14CQ5TAP6 766 aaKnown RBP9.7□□□□□ -0.86
CSTF3-208ENST00000528865 RESP18Q5W5W9 173 aa9.7□□□□□ -0.86
CSTF3-208ENST00000528865 CCDC102BQ68D86 513 aa9.7□□□□□ -0.86
CSTF3-208ENST00000528865 PI16Q6UXB8 463 aa9.7□□□□□ -0.86
CSTF3-208ENST00000528865 ZNF34Q8IZ26 560 aa9.7□□□□□ -0.86
CSTF3-208ENST00000528865 LPIN2Q92539 896 aa9.7□□□□□ -0.86
CSTF3-208ENST00000528865 C16orf45Q96MC5 204 aaPredicted RBP9.7□□□□□ -0.86
CSTF3-208ENST00000528865 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.7□□□□□ -0.86
CSTF3-208ENST00000528865 SLAIN2Q9P270 581 aa9.7□□□□□ -0.86
CSTF3-208ENST00000528865 TBC1D2BQ9UPU7 963 aa9.7□□□□□ -0.86
CSTF3-208ENST00000528865 MORC2Q9Y6X9 1032 aaPredicted RBP9.7□□□□□ -0.86
CSTF3-208ENST00000528865 MROH5Q6ZUA9 1318 aa9.7□□□□□ -0.86
CSTF3-208ENST00000528865 ZNF532Q9HCE3 1301 aa9.7□□□□□ -0.86
CSTF3-208ENST00000528865 TOGARAM1Q9Y4F4 1720 aa9.7□□□□□ -0.86
CSTF3-208ENST00000528865 USP27XA6NNY8 438 aa9.69□□□□□ -0.86
CSTF3-208ENST00000528865 PPFIA3O75145 1194 aa9.69□□□□□ -0.86
CSTF3-208ENST00000528865 ADRA2BP18089 450 aa9.69□□□□□ -0.86
CSTF3-208ENST00000528865 SYKP43405 635 aa9.69□□□□□ -0.86
CSTF3-208ENST00000528865 RCAN1P53805 252 aa9.69□□□□□ -0.86
CSTF3-208ENST00000528865 ARMCX5Q6P1M9 558 aa9.69□□□□□ -0.86
CSTF3-208ENST00000528865 APOA5Q6Q788 366 aa9.69□□□□□ -0.86
CSTF3-208ENST00000528865 SHC4Q6S5L8 630 aa9.69□□□□□ -0.86
CSTF3-208ENST00000528865 FILIP1Q7Z7B0 1213 aa9.69□□□□□ -0.86
CSTF3-208ENST00000528865 IFNL3Q8IZI9 196 aa9.69□□□□□ -0.86
CSTF3-208ENST00000528865 SYNE4Q8N205 404 aa9.69□□□□□ -0.86
CSTF3-208ENST00000528865 SLC4A9Q96Q91 983 aa9.69□□□□□ -0.86
CSTF3-208ENST00000528865 XPO4Q9C0E2 1151 aaKnown RBP9.69□□□□□ -0.86
CSTF3-208ENST00000528865 HSD3B7Q9H2F3 369 aa9.69□□□□□ -0.86
CSTF3-208ENST00000528865 LY9Q9HBG7 655 aa9.69□□□□□ -0.86
CSTF3-208ENST00000528865 CNNM1Q9NRU3 951 aa9.69□□□□□ -0.86
CSTF3-208ENST00000528865 GJB4Q9NTQ9 266 aa9.69□□□□□ -0.86
CSTF3-208ENST00000528865 PRDM4Q9UKN5 801 aa9.69□□□□□ -0.86
CSTF3-208ENST00000528865 MYH7P12883 1935 aa9.68□□□□□ -0.86
CSTF3-208ENST00000528865 XIRP1Q702N8 1843 aaKnown RBP9.68□□□□□ -0.86
CSTF3-208ENST00000528865 DISP2A7MBM2 1401 aa9.68□□□□□ -0.86
CSTF3-208ENST00000528865 ZBTB43O43298 467 aa9.68□□□□□ -0.86
CSTF3-208ENST00000528865 FMNL1O95466 1100 aaPredicted RBP9.68□□□□□ -0.86
CSTF3-208ENST00000528865 IFNAR1P17181 557 aa9.68□□□□□ -0.86
CSTF3-208ENST00000528865 IL6STP40189 918 aaPredicted RBP9.68□□□□□ -0.86
CSTF3-208ENST00000528865 IARSP41252 1262 aaKnown RBP9.68□□□□□ -0.86
CSTF3-208ENST00000528865 PHKA1P46020 1223 aa9.68□□□□□ -0.86
CSTF3-208ENST00000528865 FANCCQ00597 558 aa9.68□□□□□ -0.86
CSTF3-208ENST00000528865 PUM3Q15397 648 aaKnown RBP9.68□□□□□ -0.86
CSTF3-208ENST00000528865 ZRSR1Q15695 479 aaKnown RBP9.68□□□□□ -0.86
CSTF3-208ENST00000528865 E4F1Q66K89 784 aaPredicted RBP9.68□□□□□ -0.86
CSTF3-208ENST00000528865 VPS37DQ86XT2 251 aa9.68□□□□□ -0.86
CSTF3-208ENST00000528865 WASF1Q92558 559 aa9.68□□□□□ -0.86
CSTF3-208ENST00000528865 ERCC4Q92889 916 aaPredicted RBP9.68□□□□□ -0.86
CSTF3-208ENST00000528865 ERO1AQ96HE7 468 aa9.68□□□□□ -0.86
CSTF3-208ENST00000528865 AIFM3Q96NN9 605 aa9.68□□□□□ -0.86
CSTF3-208ENST00000528865 CCDC85AQ96PX6 553 aaPredicted RBP9.68□□□□□ -0.86
CSTF3-208ENST00000528865 GTPBP4Q9BZE4 634 aaKnown RBP9.68□□□□□ -0.86
CSTF3-208ENST00000528865 L2HGDHQ9H9P8 463 aa9.68□□□□□ -0.86
CSTF3-208ENST00000528865 OGFRQ9NZT2 677 aa9.68□□□□□ -0.86
CSTF3-208ENST00000528865 IFNKQ9P0W0 207 aa9.68□□□□□ -0.86
CSTF3-208ENST00000528865 CGNQ9P2M7 1197 aaKnown RBP9.68□□□□□ -0.86
CSTF3-208ENST00000528865 WWC3Q9ULE0 1092 aa9.68□□□□□ -0.86
CSTF3-208ENST00000528865 DENND2AQ9ULE3 1009 aa9.68□□□□□ -0.86
CSTF3-208ENST00000528865 TACC3Q9Y6A5 838 aa9.68□□□□□ -0.86
CSTF3-208ENST00000528865 LRP6O75581 1613 aa9.67□□□□□ -0.86
CSTF3-208ENST00000528865 BCL9O00512 1426 aa9.67□□□□□ -0.86
CSTF3-208ENST00000528865 PNPLA7Q6ZV29 1317 aa9.67□□□□□ -0.86
CSTF3-208ENST00000528865 B4E1Z4 1266 aa9.67□□□□□ -0.86
CSTF3-208ENST00000528865 CBFA2T2O43439 604 aa9.67□□□□□ -0.86
CSTF3-208ENST00000528865 RANBP6O60518 1105 aaKnown RBP9.67□□□□□ -0.86
CSTF3-208ENST00000528865 ZSCAN20P17040 1043 aaPredicted RBP9.67□□□□□ -0.86
CSTF3-208ENST00000528865 GNAT2P19087 354 aa9.67□□□□□ -0.86
CSTF3-208ENST00000528865 GPTP24298 496 aa9.67□□□□□ -0.86
CSTF3-208ENST00000528865 MDM2Q00987 491 aaPredicted RBP9.67□□□□□ -0.86
CSTF3-208ENST00000528865 SSRP1Q08945 709 aaKnown RBP9.67□□□□□ -0.86
CSTF3-208ENST00000528865 CCDC93Q567U6 631 aa9.67□□□□□ -0.86
CSTF3-208ENST00000528865 KRBA2Q6ZNG9 492 aa9.67□□□□□ -0.86
CSTF3-208ENST00000528865 RAB11FIP4Q86YS3 637 aa9.67□□□□□ -0.86
CSTF3-208ENST00000528865 ZNF579Q8NAF0 562 aaKnown RBP9.67□□□□□ -0.86
CSTF3-208ENST00000528865 KIF18AQ8NI77 898 aa9.67□□□□□ -0.86
CSTF3-208ENST00000528865 STAG1Q8WVM7 1258 aa9.67□□□□□ -0.86
CSTF3-208ENST00000528865 NOL10Q9BSC4 688 aaKnown RBP9.67□□□□□ -0.86
CSTF3-208ENST00000528865 KRT23Q9C075 422 aa9.67□□□□□ -0.86
CSTF3-208ENST00000528865 TMX1Q9H3N1 280 aa9.67□□□□□ -0.86
CSTF3-208ENST00000528865 CNNM2Q9H8M5 875 aa9.67□□□□□ -0.86
CSTF3-208ENST00000528865 SENP2Q9HC62 589 aa9.67□□□□□ -0.86
CSTF3-208ENST00000528865 EPB41L4AQ9HCS5 686 aaPredicted RBP9.67□□□□□ -0.86
CSTF3-208ENST00000528865 STRN4Q9NRL3 753 aa9.67□□□□□ -0.86
CSTF3-208ENST00000528865 FAM53CQ9NYF3 392 aa9.67□□□□□ -0.86
CSTF3-208ENST00000528865 ZSWIM5Q9P217 1185 aa9.67□□□□□ -0.86
CSTF3-208ENST00000528865 TRMT112Q9UI30 125 aaKnown RBP9.67□□□□□ -0.86
CSTF3-208ENST00000528865 LRP5O75197 1615 aa9.67□□□□□ -0.86
CSTF3-208ENST00000528865 RTL9Q8NET4 1388 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms