RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 GNL3LQ9NVN8 582 aaKnown RBP20.42■□□□□ 0.86
LTBP3-210ENST00000528516 ERLIN1O75477 346 aa20.42■□□□□ 0.86
LTBP3-210ENST00000528516 FANCCQ00597 558 aa20.41■□□□□ 0.86
LTBP3-210ENST00000528516 LONRF2Q1L5Z9 754 aa20.41■□□□□ 0.86
LTBP3-210ENST00000528516 MICALL1Q8N3F8 863 aa20.41■□□□□ 0.86
LTBP3-210ENST00000528516 SPTLC2O15270 562 aa20.41■□□□□ 0.86
LTBP3-210ENST00000528516 ZBTB43O43298 467 aa20.41■□□□□ 0.86
LTBP3-210ENST00000528516 TAF5LO75529 589 aa20.41■□□□□ 0.86
LTBP3-210ENST00000528516 TEX2Q8IWB9 1127 aa20.41■□□□□ 0.86
LTBP3-210ENST00000528516 PLIN2Q99541 437 aa20.41■□□□□ 0.86
LTBP3-210ENST00000528516 OSBPL5Q9H0X9 879 aaPredicted RBP20.41■□□□□ 0.86
LTBP3-210ENST00000528516 NPHP4O75161 1426 aaPredicted RBP20.41■□□□□ 0.86
LTBP3-210ENST00000528516 SSRP1Q08945 709 aaKnown RBP20.4■□□□□ 0.86
LTBP3-210ENST00000528516 RESTQ13127 1097 aa20.4■□□□□ 0.86
LTBP3-210ENST00000528516 NECTIN1Q15223 517 aa20.4■□□□□ 0.86
LTBP3-210ENST00000528516 KIF4BQ2VIQ3 1234 aa20.4■□□□□ 0.86
LTBP3-210ENST00000528516 ATP8B1O43520 1251 aa20.4■□□□□ 0.86
LTBP3-210ENST00000528516 TXLNAP40222 546 aa20.4■□□□□ 0.86
LTBP3-210ENST00000528516 COL9A3Q14050 684 aaPredicted RBP20.4■□□□□ 0.86
LTBP3-210ENST00000528516 AXDND1Q5T1B0 1012 aaPredicted RBP20.4■□□□□ 0.86
LTBP3-210ENST00000528516 PHLPP2Q6ZVD8 1323 aa20.4■□□□□ 0.86
LTBP3-210ENST00000528516 IL15P40933 162 aaPredicted RBP20.4■□□□□ 0.86
LTBP3-210ENST00000528516 STAMQ92783 540 aa20.4■□□□□ 0.86
LTBP3-210ENST00000528516 CBFA2T2O43439 604 aa20.39■□□□□ 0.86
LTBP3-210ENST00000528516 MFSD6Q6ZSS7 791 aa20.39■□□□□ 0.86
LTBP3-210ENST00000528516 LRRC24Q50LG9 513 aa20.39■□□□□ 0.85
LTBP3-210ENST00000528516 CDK5RAP3Q96JB5 506 aa20.39■□□□□ 0.85
LTBP3-210ENST00000528516 C19orf44Q9H6X5 657 aa20.39■□□□□ 0.85
LTBP3-210ENST00000528516 AATKQ6ZMQ8 1374 aa20.39■□□□□ 0.85
LTBP3-210ENST00000528516 RHOXF2BP0C7M4 288 aa20.38■□□□□ 0.85
LTBP3-210ENST00000528516 NOP2P46087 812 aaKnown RBP20.38■□□□□ 0.85
LTBP3-210ENST00000528516 EIF5P55010 431 aaKnown RBP20.38■□□□□ 0.85
LTBP3-210ENST00000528516 PI16Q6UXB8 463 aa20.38■□□□□ 0.85
LTBP3-210ENST00000528516 RHOXF2Q9BQY4 288 aa20.38■□□□□ 0.85
LTBP3-210ENST00000528516 CCDC93Q567U6 631 aa20.38■□□□□ 0.85
LTBP3-210ENST00000528516 CCDC102BQ68D86 513 aa20.38■□□□□ 0.85
LTBP3-210ENST00000528516 ZNF219Q9P2Y4 722 aaPredicted RBP20.38■□□□□ 0.85
LTBP3-210ENST00000528516 MAGEC2Q9UBF1 373 aaPredicted RBP20.38■□□□□ 0.85
LTBP3-210ENST00000528516 STX8Q9UNK0 236 aa20.38■□□□□ 0.85
LTBP3-210ENST00000528516 MKNK2Q9HBH9 465 aa20.38■□□□□ 0.85
LTBP3-210ENST00000528516 CEP170BQ9Y4F5 1589 aaPredicted RBP20.38■□□□□ 0.85
LTBP3-210ENST00000528516 MNAT1P51948 309 aa20.37■□□□□ 0.85
LTBP3-210ENST00000528516 NBPF11Q86T75 865 aa20.37■□□□□ 0.85
LTBP3-210ENST00000528516 METTL22Q9BUU2 404 aaPredicted RBP20.37■□□□□ 0.85
LTBP3-210ENST00000528516 PUS3Q9BZE2 481 aaKnown RBP20.37■□□□□ 0.85
LTBP3-210ENST00000528516 GPHNQ9NQX3 736 aaPredicted RBP20.37■□□□□ 0.85
LTBP3-210ENST00000528516 GJB4Q9NTQ9 266 aa20.37■□□□□ 0.85
LTBP3-210ENST00000528516 FAN1Q9Y2M0 1017 aa20.37■□□□□ 0.85
LTBP3-210ENST00000528516 TAF6LQ9Y6J9 622 aa20.37■□□□□ 0.85
LTBP3-210ENST00000528516 EIF3CLB5ME19 914 aaKnown RBP20.37■□□□□ 0.85
LTBP3-210ENST00000528516 RNF113AO15541 343 aaKnown RBP20.37■□□□□ 0.85
LTBP3-210ENST00000528516 ATP1A3P13637 1013 aa20.37■□□□□ 0.85
LTBP3-210ENST00000528516 PPM1EQ8WY54 764 aa20.37■□□□□ 0.85
LTBP3-210ENST00000528516 IL17RAQ96F46 866 aa20.37■□□□□ 0.85
LTBP3-210ENST00000528516 EIF3CQ99613 913 aaKnown RBP20.37■□□□□ 0.85
LTBP3-210ENST00000528516 ACBD3Q9H3P7 528 aa20.37■□□□□ 0.85
LTBP3-210ENST00000528516 MAPK8IP1Q9UQF2 711 aa20.37■□□□□ 0.85
LTBP3-210ENST00000528516 CENPHQ9H3R5 247 aa20.37■□□□□ 0.85
LTBP3-210ENST00000528516 SLC4A4Q9Y6R1 1079 aa20.37■□□□□ 0.85
LTBP3-210ENST00000528516 NEURL1BA8MQ27 555 aa20.36■□□□□ 0.85
LTBP3-210ENST00000528516 EXOC5O00471 708 aa20.36■□□□□ 0.85
LTBP3-210ENST00000528516 ERCC3P19447 782 aa20.36■□□□□ 0.85
LTBP3-210ENST00000528516 NLRP5P59047 1200 aa20.36■□□□□ 0.85
LTBP3-210ENST00000528516 CYP7A1P22680 504 aa20.36■□□□□ 0.85
LTBP3-210ENST00000528516 WWC2Q6AWC2 1192 aa20.36■□□□□ 0.85
LTBP3-210ENST00000528516 MAGEB6Q8N7X4 407 aa20.36■□□□□ 0.85
LTBP3-210ENST00000528516 DHX58Q96C10 678 aa20.36■□□□□ 0.85
LTBP3-210ENST00000528516 LZTFL1Q9NQ48 299 aa20.36■□□□□ 0.85
LTBP3-210ENST00000528516 EPS15P42566 896 aa20.36■□□□□ 0.85
LTBP3-210ENST00000528516 TOB2Q14106 344 aaPredicted RBP20.36■□□□□ 0.85
LTBP3-210ENST00000528516 UIMC1Q96RL1 719 aa20.36■□□□□ 0.85
LTBP3-210ENST00000528516 KIAA1468Q9P260 1216 aa20.36■□□□□ 0.85
LTBP3-210ENST00000528516 DBNLQ9UJU6 430 aaKnown RBP20.36■□□□□ 0.85
LTBP3-210ENST00000528516 KRT18P05783 430 aaKnown RBP20.35■□□□□ 0.85
LTBP3-210ENST00000528516 MAGEA9P43362 315 aa20.35■□□□□ 0.85
LTBP3-210ENST00000528516 ZAP70P43403 619 aa20.35■□□□□ 0.85
LTBP3-210ENST00000528516 HDXQ7Z353 690 aa20.35■□□□□ 0.85
LTBP3-210ENST00000528516 ANKIB1Q9P2G1 1089 aa20.35■□□□□ 0.85
LTBP3-210ENST00000528516 PPP2R2CQ9Y2T4 447 aa20.35■□□□□ 0.85
LTBP3-210ENST00000528516 CDC42BPGQ6DT37 1551 aa20.35■□□□□ 0.85
LTBP3-210ENST00000528516 ARHGAP23Q9P227 1491 aa20.35■□□□□ 0.85
LTBP3-210ENST00000528516 DESI2Q9BSY9 194 aa20.35■□□□□ 0.85
LTBP3-210ENST00000528516 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.35■□□□□ 0.85
LTBP3-210ENST00000528516 MAP2P11137 1827 aaKnown RBP20.35■□□□□ 0.85
LTBP3-210ENST00000528516 H3BQF6 201 aa20.35■□□□□ 0.85
LTBP3-210ENST00000528516 CCDC70Q6NSX1 233 aa20.35■□□□□ 0.85
LTBP3-210ENST00000528516 MAP4K1Q92918 833 aa20.35■□□□□ 0.85
LTBP3-210ENST00000528516 SLC5A1P13866 664 aa20.34■□□□□ 0.85
LTBP3-210ENST00000528516 CHMP4BP1P59074 171 aa20.34■□□□□ 0.85
LTBP3-210ENST00000528516 FOXR1Q6PIV2 292 aa20.34■□□□□ 0.85
LTBP3-210ENST00000528516 DNAJC10Q8IXB1 793 aa20.34■□□□□ 0.85
LTBP3-210ENST00000528516 ADD1P35611 737 aaKnown RBP20.34■□□□□ 0.85
LTBP3-210ENST00000528516 NDUFA8P51970 172 aa20.34■□□□□ 0.85
LTBP3-210ENST00000528516 CTCFLQ8NI51 663 aaPredicted RBP20.34■□□□□ 0.85
LTBP3-210ENST00000528516 GEMIN8Q9NWZ8 242 aaKnown RBP20.34■□□□□ 0.85
LTBP3-210ENST00000528516 PARP3Q9Y6F1 533 aa20.34■□□□□ 0.85
LTBP3-210ENST00000528516 WDHD1O75717 1129 aaPredicted RBP20.34■□□□□ 0.85
LTBP3-210ENST00000528516 IQCA1Q86XH1 822 aa20.34■□□□□ 0.85
LTBP3-210ENST00000528516 ZSCAN29Q8IWY8 852 aaPredicted RBP20.34■□□□□ 0.85
LTBP3-210ENST00000528516 WDR24Q96S15 920 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms