RNA–Protein interactions for RNA: ENST00000527551.1

USH1C-206, Transcript of USH1 protein network component harmonin, humanhuman

TSL 2

Gene USH1C, Length 371 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-206ENST00000527551 PLCG2P16885 1265 aa15.51■□□□□ 0.07
USH1C-206ENST00000527551 PDE1AP54750 535 aa15.51■□□□□ 0.07
USH1C-206ENST00000527551 LRRFIP1Q32MZ4 808 aaKnown RBP15.51■□□□□ 0.07
USH1C-206ENST00000527551 ZSCAN25Q6NSZ9 544 aa15.51■□□□□ 0.07
USH1C-206ENST00000527551 CENPQQ7L2Z9 268 aaPredicted RBP15.51■□□□□ 0.07
USH1C-206ENST00000527551 FAM83AQ86UY5 434 aa15.51■□□□□ 0.07
USH1C-206ENST00000527551 PI4K2BQ8TCG2 481 aa15.51■□□□□ 0.07
USH1C-206ENST00000527551 ZNF384Q8TF68 577 aa15.51■□□□□ 0.07
USH1C-206ENST00000527551 OSBPL3Q9H4L5 887 aa15.51■□□□□ 0.07
USH1C-206ENST00000527551 ANTXR1Q9H6X2 564 aa15.51■□□□□ 0.07
USH1C-206ENST00000527551 PCDHAC2Q9Y5I4 1007 aa15.51■□□□□ 0.07
USH1C-206ENST00000527551 FOCADQ5VW36 1801 aa15.5■□□□□ 0.07
USH1C-206ENST00000527551 CLRN2A0PK11 232 aa15.5■□□□□ 0.07
USH1C-206ENST00000527551 NPM3O75607 178 aaKnown RBP15.5■□□□□ 0.07
USH1C-206ENST00000527551 BTDP43251 543 aa15.5■□□□□ 0.07
USH1C-206ENST00000527551 PPP4CP60510 307 aa15.5■□□□□ 0.07
USH1C-206ENST00000527551 DEFB129Q9H1M3 183 aa15.5■□□□□ 0.07
USH1C-206ENST00000527551 VEZTQ9HBM0 779 aa15.5■□□□□ 0.07
USH1C-206ENST00000527551 RPAP1Q9BWH6 1393 aaPredicted RBP15.49■□□□□ 0.07
USH1C-206ENST00000527551 CDK5RAP2Q96SN8 1893 aa15.49■□□□□ 0.07
USH1C-206ENST00000527551 TMEM88BA6NKF7 163 aa15.49■□□□□ 0.07
USH1C-206ENST00000527551 ADM5C9JUS6 153 aa15.49■□□□□ 0.07
USH1C-206ENST00000527551 NF2P35240 595 aa15.49■□□□□ 0.07
USH1C-206ENST00000527551 FKBP1BP68106 108 aa15.49■□□□□ 0.07
USH1C-206ENST00000527551 CDC42EP5Q6NZY7 148 aa15.49■□□□□ 0.07
USH1C-206ENST00000527551 KBTBD3Q8NAB2 608 aa15.49■□□□□ 0.07
USH1C-206ENST00000527551 OTUD7AQ8TE49 926 aaPredicted RBP15.49■□□□□ 0.07
USH1C-206ENST00000527551 CDCA5Q96FF9 252 aa15.49■□□□□ 0.07
USH1C-206ENST00000527551 IDI2Q9BXS1 227 aa15.49■□□□□ 0.07
USH1C-206ENST00000527551 CREBZFQ9NS37 354 aa15.49■□□□□ 0.07
USH1C-206ENST00000527551 USP40Q9NVE5 1235 aa15.49■□□□□ 0.07
USH1C-206ENST00000527551 NDUFB9Q9Y6M9 179 aa15.49■□□□□ 0.07
USH1C-206ENST00000527551 TRAF5O00463 557 aa15.48■□□□□ 0.07
USH1C-206ENST00000527551 ZFYP08048 801 aaPredicted RBP15.48■□□□□ 0.07
USH1C-206ENST00000527551 CYP7A1P22680 504 aa15.48■□□□□ 0.07
USH1C-206ENST00000527551 SUPT20HL1Q3ZLR7 823 aa15.48■□□□□ 0.07
USH1C-206ENST00000527551 SLC9C2Q5TAH2 1124 aa15.48■□□□□ 0.07
USH1C-206ENST00000527551 MAGEB6Q8N7X4 407 aa15.48■□□□□ 0.07
USH1C-206ENST00000527551 HOOK2Q96ED9 719 aa15.48■□□□□ 0.07
USH1C-206ENST00000527551 CCDC136Q96JN2 1154 aa15.48■□□□□ 0.07
USH1C-206ENST00000527551 PAPPA2Q9BXP8 1791 aa15.48■□□□□ 0.07
USH1C-206ENST00000527551 AK9Q5TCS8 1911 aa15.48■□□□□ 0.07
USH1C-206ENST00000527551 RFX7Q2KHR2 1363 aa15.48■□□□□ 0.07
USH1C-206ENST00000527551 ENTPD3O75355 529 aa15.47■□□□□ 0.07
USH1C-206ENST00000527551 PDE6AP16499 860 aa15.47■□□□□ 0.07
USH1C-206ENST00000527551 ADD2P35612 726 aa15.47■□□□□ 0.07
USH1C-206ENST00000527551 RASA3Q14644 834 aa15.47■□□□□ 0.07
USH1C-206ENST00000527551 UBE3CQ15386 1083 aa15.47■□□□□ 0.07
USH1C-206ENST00000527551 PLEKHM2Q8IWE5 1019 aa15.47■□□□□ 0.07
USH1C-206ENST00000527551 FAM151AQ8WW52 585 aa15.47■□□□□ 0.07
USH1C-206ENST00000527551 COL2A1P02458 1487 aaPredicted RBP15.46■□□□□ 0.07
USH1C-206ENST00000527551 CELF2O95319 508 aaKnown RBP15.46■□□□□ 0.07
USH1C-206ENST00000527551 RHBDL3P58872 404 aa15.46■□□□□ 0.07
USH1C-206ENST00000527551 CST9Q5W186 159 aa15.46■□□□□ 0.07
USH1C-206ENST00000527551 TSHZ3Q63HK5 1081 aa15.46■□□□□ 0.07
USH1C-206ENST00000527551 C2orf69Q8N8R5 385 aa15.46■□□□□ 0.07
USH1C-206ENST00000527551 EVI5LQ96CN4 794 aa15.46■□□□□ 0.07
USH1C-206ENST00000527551 EDC3Q96F86 508 aaKnown RBP15.46■□□□□ 0.07
USH1C-206ENST00000527551 TCRBV5S4A2TA0A5A2 114 aa15.45■□□□□ 0.06
USH1C-206ENST00000527551 UNCXA6NJT0 531 aa15.45■□□□□ 0.06
USH1C-206ENST00000527551 TCP10L2B9ZVM9 353 aa15.45■□□□□ 0.06
USH1C-206ENST00000527551 ADGRA1Q86SQ6 560 aa15.45■□□□□ 0.06
USH1C-206ENST00000527551 HHIPL1Q96JK4 782 aa15.45■□□□□ 0.06
USH1C-206ENST00000527551 PPP4R2Q9NY27 417 aa15.45■□□□□ 0.06
USH1C-206ENST00000527551 CNTNAP1P78357 1384 aa15.45■□□□□ 0.06
USH1C-206ENST00000527551 ZNF532Q9HCE3 1301 aa15.44■□□□□ 0.06
USH1C-206ENST00000527551 WDHD1O75717 1129 aaPredicted RBP15.44■□□□□ 0.06
USH1C-206ENST00000527551 CACNB3P54284 484 aa15.44■□□□□ 0.06
USH1C-206ENST00000527551 TEX11Q8IYF3 940 aa15.44■□□□□ 0.06
USH1C-206ENST00000527551 TEPSINQ96N21 525 aa15.44■□□□□ 0.06
USH1C-206ENST00000527551 GBA2Q9HCG7 927 aaPredicted RBP15.44■□□□□ 0.06
USH1C-206ENST00000527551 AATFQ9NY61 560 aaKnown RBP eCLIP15.44■□□□□ 0.06
USH1C-206ENST00000527551 FAM198AQ9UFP1 575 aa15.44■□□□□ 0.06
USH1C-206ENST00000527551 MAGEB6P1A0A0J9YX57 407 aa15.43■□□□□ 0.06
USH1C-206ENST00000527551 PPP1R12BO60237 982 aaPredicted RBP15.43■□□□□ 0.06
USH1C-206ENST00000527551 RGS3P49796 1198 aa15.43■□□□□ 0.06
USH1C-206ENST00000527551 ZNF408Q9H9D4 720 aa15.43■□□□□ 0.06
USH1C-206ENST00000527551 TLL2Q9Y6L7 1015 aa15.43■□□□□ 0.06
USH1C-206ENST00000527551 ATRNL1Q5VV63 1379 aa15.43■□□□□ 0.06
USH1C-206ENST00000527551 MYH1P12882 1939 aa15.43■□□□□ 0.06
USH1C-206ENST00000527551 RNF113AO15541 343 aaKnown RBP15.42■□□□□ 0.06
USH1C-206ENST00000527551 FMR1Q06787 632 aaKnown RBP eCLIP15.42■□□□□ 0.06
USH1C-206ENST00000527551 NFIAQ12857 509 aa15.42■□□□□ 0.06
USH1C-206ENST00000527551 ARMC9Q7Z3E5 817 aa15.42■□□□□ 0.06
USH1C-206ENST00000527551 SAPCD2Q86UD0 394 aa15.42■□□□□ 0.06
USH1C-206ENST00000527551 SH3RF3Q8TEJ3 882 aaPredicted RBP15.42■□□□□ 0.06
USH1C-206ENST00000527551 APPBP2Q92624 585 aa15.42■□□□□ 0.06
USH1C-206ENST00000527551 RIOK1Q9BRS2 568 aaKnown RBP15.42■□□□□ 0.06
USH1C-206ENST00000527551 FSD1Q9BTV5 496 aa15.42■□□□□ 0.06
USH1C-206ENST00000527551 TMEM39BQ9GZU3 492 aa15.42■□□□□ 0.06
USH1C-206ENST00000527551 SCAF8Q9UPN6 1271 aaKnown RBP15.42■□□□□ 0.06
USH1C-206ENST00000527551 SSC5DA1L4H1 1573 aa15.41■□□□□ 0.06
USH1C-206ENST00000527551 RASSF10A6NK89 507 aa15.41■□□□□ 0.06
USH1C-206ENST00000527551 PDE4AP27815 886 aa15.41■□□□□ 0.06
USH1C-206ENST00000527551 MAP3K11Q16584 847 aa15.41■□□□□ 0.06
USH1C-206ENST00000527551 NBPF12Q5TAG4 269 aaPredicted RBP15.41■□□□□ 0.06
USH1C-206ENST00000527551 PRAMEF18Q5VWM3 479 aa15.41■□□□□ 0.06
USH1C-206ENST00000527551 DCAF15Q66K64 600 aa15.41■□□□□ 0.06
USH1C-206ENST00000527551 DLK2Q6UY11 383 aa15.41■□□□□ 0.06
USH1C-206ENST00000527551 MIGA1Q8NAN2 632 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms