RNA–Protein interactions for RNA: ENST00000527265.1

CLNS1A-208, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 620 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-208ENST00000527265 LRRC4CQ9HCJ2 640 aa5.46□□□□□ -1.54
CLNS1A-208ENST00000527265 SH2B1Q9NRF2 756 aaPredicted RBP5.46□□□□□ -1.54
CLNS1A-208ENST00000527265 PRKAG2Q9UGJ0 569 aa5.46□□□□□ -1.54
CLNS1A-208ENST00000527265 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.46□□□□□ -1.54
CLNS1A-208ENST00000527265 CARMIL2Q6F5E8 1435 aa5.46□□□□□ -1.54
CLNS1A-208ENST00000527265 TLDC2A0PJX2 215 aa5.45□□□□□ -1.54
CLNS1A-208ENST00000527265 RAB11FIP3O75154 756 aa5.45□□□□□ -1.54
CLNS1A-208ENST00000527265 EIF1AXP47813 144 aaKnown RBP5.45□□□□□ -1.54
CLNS1A-208ENST00000527265 CCDC144BQ3MJ40 725 aa5.45□□□□□ -1.54
CLNS1A-208ENST00000527265 FAM26DQ5JW98 314 aa5.45□□□□□ -1.54
CLNS1A-208ENST00000527265 TTC39BQ5VTQ0 682 aaPredicted RBP5.45□□□□□ -1.54
CLNS1A-208ENST00000527265 SLC7A3Q8WY07 619 aa5.45□□□□□ -1.54
CLNS1A-208ENST00000527265 PBX4Q9BYU1 374 aa5.45□□□□□ -1.54
CLNS1A-208ENST00000527265 SBNO2Q9Y2G9 1366 aa5.44□□□□□ -1.54
CLNS1A-208ENST00000527265 UBAP1LF5GYI3 381 aa5.44□□□□□ -1.54
CLNS1A-208ENST00000527265 ATP2B1P20020 1258 aa5.44□□□□□ -1.54
CLNS1A-208ENST00000527265 RAP1GAPP47736 663 aa5.44□□□□□ -1.54
CLNS1A-208ENST00000527265 AAMPQ13685 434 aa5.44□□□□□ -1.54
CLNS1A-208ENST00000527265 NCAPG2Q86XI2 1143 aa5.44□□□□□ -1.54
CLNS1A-208ENST00000527265 ETFBKMTQ8IXQ9 262 aa5.44□□□□□ -1.54
CLNS1A-208ENST00000527265 FAM9AQ8IZU1 332 aaPredicted RBP5.44□□□□□ -1.54
CLNS1A-208ENST00000527265 SLC43A3Q8NBI5 491 aa5.44□□□□□ -1.54
CLNS1A-208ENST00000527265 GPATCH3Q96I76 525 aa5.44□□□□□ -1.54
CLNS1A-208ENST00000527265 RC3H2Q9HBD1 1191 aaKnown RBP5.44□□□□□ -1.54
CLNS1A-208ENST00000527265 FAM13BQ9NYF5 915 aa5.44□□□□□ -1.54
CLNS1A-208ENST00000527265 ZC3H7BQ9UGR2 993 aaKnown RBP5.44□□□□□ -1.54
CLNS1A-208ENST00000527265 ZBTB39O15060 712 aa5.43□□□□□ -1.54
CLNS1A-208ENST00000527265 GTF2F1P35269 517 aaKnown RBP eCLIP5.43□□□□□ -1.54
CLNS1A-208ENST00000527265 EGFLAMQ63HQ2 1017 aa5.43□□□□□ -1.54
CLNS1A-208ENST00000527265 SDE2Q6IQ49 451 aa5.43□□□□□ -1.54
CLNS1A-208ENST00000527265 ALKBH2Q6NS38 261 aa5.43□□□□□ -1.54
CLNS1A-208ENST00000527265 ABTB2Q8N961 1025 aa5.43□□□□□ -1.54
CLNS1A-208ENST00000527265 TMEM87AQ8NBN3 555 aa5.43□□□□□ -1.54
CLNS1A-208ENST00000527265 SMG8Q8ND04 991 aaKnown RBP5.43□□□□□ -1.54
CLNS1A-208ENST00000527265 FBLIM1Q8WUP2 373 aa5.43□□□□□ -1.54
CLNS1A-208ENST00000527265 FAM161BQ96MY7 647 aa5.43□□□□□ -1.54
CLNS1A-208ENST00000527265 TGIF2Q9GZN2 237 aa5.43□□□□□ -1.54
CLNS1A-208ENST00000527265 PIF1Q9H611 641 aa5.43□□□□□ -1.54
CLNS1A-208ENST00000527265 CCSER2Q9H7U1 834 aa5.43□□□□□ -1.54
CLNS1A-208ENST00000527265 CAPN10Q9HC96 672 aa5.43□□□□□ -1.54
CLNS1A-208ENST00000527265 NLRP2Q9NX02 1062 aa5.43□□□□□ -1.54
CLNS1A-208ENST00000527265 FNDC3AQ9Y2H6 1198 aaKnown RBP5.43□□□□□ -1.54
CLNS1A-208ENST00000527265 TBX22Q9Y458 520 aa5.43□□□□□ -1.54
CLNS1A-208ENST00000527265 FAM170BA6NMN3 283 aa5.42□□□□□ -1.54
CLNS1A-208ENST00000527265 NDUFB5O43674 189 aa5.42□□□□□ -1.54
CLNS1A-208ENST00000527265 FZD6O60353 706 aa5.42□□□□□ -1.54
CLNS1A-208ENST00000527265 FANCCQ00597 558 aa5.42□□□□□ -1.54
CLNS1A-208ENST00000527265 C19orf57Q0VDD7 668 aa5.42□□□□□ -1.54
CLNS1A-208ENST00000527265 COL13A1Q5TAT6 717 aaPredicted RBP5.42□□□□□ -1.54
CLNS1A-208ENST00000527265 TMC7Q7Z402 723 aa5.42□□□□□ -1.54
CLNS1A-208ENST00000527265 ATCAYQ86WG3 371 aa5.42□□□□□ -1.54
CLNS1A-208ENST00000527265 BCL7CQ8WUZ0 217 aaPredicted RBP5.42□□□□□ -1.54
CLNS1A-208ENST00000527265 ARMC5Q96C12 935 aa5.42□□□□□ -1.54
CLNS1A-208ENST00000527265 MISP3Q96FF7 219 aa5.42□□□□□ -1.54
CLNS1A-208ENST00000527265 PPP1R16BQ96T49 567 aa5.42□□□□□ -1.54
CLNS1A-208ENST00000527265 SUGCTQ9HAC7 445 aa5.42□□□□□ -1.54
CLNS1A-208ENST00000527265 CCDC87Q9NVE4 849 aa5.42□□□□□ -1.54
CLNS1A-208ENST00000527265 LRRC10BA6NIK2 292 aa5.41□□□□□ -1.54
CLNS1A-208ENST00000527265 KIF4AO95239 1232 aa5.41□□□□□ -1.54
CLNS1A-208ENST00000527265 ADMP35318 185 aa5.41□□□□□ -1.54
CLNS1A-208ENST00000527265 BUD31P41223 144 aaPredicted RBP5.41□□□□□ -1.54
CLNS1A-208ENST00000527265 ZAP70P43403 619 aa5.41□□□□□ -1.54
CLNS1A-208ENST00000527265 FMR1Q06787 632 aaKnown RBP eCLIP5.41□□□□□ -1.54
CLNS1A-208ENST00000527265 KRTAP5-3Q6L8H2 238 aa5.41□□□□□ -1.54
CLNS1A-208ENST00000527265 SIAH1Q8IUQ4 282 aa5.41□□□□□ -1.54
CLNS1A-208ENST00000527265 NLGN1Q8N2Q7 840 aa5.41□□□□□ -1.54
CLNS1A-208ENST00000527265 PMFBP1Q8TBY8 1022 aa5.41□□□□□ -1.54
CLNS1A-208ENST00000527265 RNF34Q969K3 372 aa5.41□□□□□ -1.54
CLNS1A-208ENST00000527265 RBCK1Q9BYM8 510 aa5.41□□□□□ -1.54
CLNS1A-208ENST00000527265 ACBD3Q9H3P7 528 aa5.41□□□□□ -1.54
CLNS1A-208ENST00000527265 METTL5Q9NRN9 209 aaKnown RBP5.41□□□□□ -1.54
CLNS1A-208ENST00000527265 FAM53CQ9NYF3 392 aa5.41□□□□□ -1.54
CLNS1A-208ENST00000527265 TIAF1O95411 115 aa5.4□□□□□ -1.54
CLNS1A-208ENST00000527265 TNNI2P48788 182 aa5.4□□□□□ -1.54
CLNS1A-208ENST00000527265 XPCQ01831 940 aaPredicted RBP5.4□□□□□ -1.54
CLNS1A-208ENST00000527265 DNM1Q05193 864 aaKnown RBP5.4□□□□□ -1.54
CLNS1A-208ENST00000527265 MAP7Q14244 749 aa5.4□□□□□ -1.54
CLNS1A-208ENST00000527265 TRIP4Q15650 581 aaPredicted RBP5.4□□□□□ -1.54
CLNS1A-208ENST00000527265 ZNF574Q6ZN55 896 aaPredicted RBP5.4□□□□□ -1.54
CLNS1A-208ENST00000527265 LRRC56Q8IYG6 542 aaPredicted RBP5.4□□□□□ -1.54
CLNS1A-208ENST00000527265 SHISA5Q8N114 240 aa5.4□□□□□ -1.54
CLNS1A-208ENST00000527265 GLIS3Q8NEA6 775 aa5.4□□□□□ -1.54
CLNS1A-208ENST00000527265 TMC1Q8TDI8 760 aa5.4□□□□□ -1.54
CLNS1A-208ENST00000527265 POP1Q99575 1024 aaKnown RBP5.4□□□□□ -1.54
CLNS1A-208ENST00000527265 USP26Q9BXU7 913 aa5.4□□□□□ -1.54
CLNS1A-208ENST00000527265 TMPRSS13Q9BYE2 586 aa5.4□□□□□ -1.54
CLNS1A-208ENST00000527265 MRS2Q9HD23 443 aa5.4□□□□□ -1.54
CLNS1A-208ENST00000527265 PARP2Q9UGN5 583 aa5.4□□□□□ -1.54
CLNS1A-208ENST00000527265 RAPGEFL1Q9UHV5 662 aa5.4□□□□□ -1.54
CLNS1A-208ENST00000527265 TREHO43280 583 aa5.39□□□□□ -1.55
CLNS1A-208ENST00000527265 DNAJA1P31689 397 aaKnown RBP5.39□□□□□ -1.55
CLNS1A-208ENST00000527265 PTPROQ16827 1216 aa5.39□□□□□ -1.55
CLNS1A-208ENST00000527265 CDPF1Q6NVV7 123 aa5.39□□□□□ -1.55
CLNS1A-208ENST00000527265 ANKLE2Q86XL3 938 aa5.39□□□□□ -1.55
CLNS1A-208ENST00000527265 GPR152Q8TDT2 470 aa5.39□□□□□ -1.55
CLNS1A-208ENST00000527265 EDEM1Q92611 657 aa5.39□□□□□ -1.55
CLNS1A-208ENST00000527265 GMLQ99445 158 aa5.39□□□□□ -1.55
CLNS1A-208ENST00000527265 PSMD1Q99460 953 aa5.39□□□□□ -1.55
CLNS1A-208ENST00000527265 ZSWIM4Q9H7M6 989 aa5.39□□□□□ -1.55
CLNS1A-208ENST00000527265 RNF19AQ9NV58 838 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms