RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 KRT23Q9C075 422 aa19.06■□□□□ 0.64
SNRNP35-204ENST00000527158 B4E1Z4 1266 aa19.05■□□□□ 0.64
SNRNP35-204ENST00000527158 ALDH1B1P30837 517 aa19.05■□□□□ 0.64
SNRNP35-204ENST00000527158 CCT2P78371 535 aaKnown RBP19.05■□□□□ 0.64
SNRNP35-204ENST00000527158 HMGN5P82970 282 aaKnown RBP19.05■□□□□ 0.64
SNRNP35-204ENST00000527158 CTDSPL2Q05D32 466 aa19.05■□□□□ 0.64
SNRNP35-204ENST00000527158 FAM184AQ8NB25 1140 aa19.05■□□□□ 0.64
SNRNP35-204ENST00000527158 FBXO41Q8TF61 875 aa19.05■□□□□ 0.64
SNRNP35-204ENST00000527158 SDR42E1Q8WUS8 393 aa19.05■□□□□ 0.64
SNRNP35-204ENST00000527158 CHAMP1Q96JM3 812 aa19.05■□□□□ 0.64
SNRNP35-204ENST00000527158 RNF41Q9H4P4 317 aaPredicted RBP19.05■□□□□ 0.64
SNRNP35-204ENST00000527158 KIF3AQ9Y496 699 aa19.05■□□□□ 0.64
SNRNP35-204ENST00000527158 CACNA1SQ13698 1873 aa19.05■□□□□ 0.64
SNRNP35-204ENST00000527158 JAK2O60674 1132 aa19.05■□□□□ 0.64
SNRNP35-204ENST00000527158 LDHBP07195 334 aaKnown RBP19.05■□□□□ 0.64
SNRNP35-204ENST00000527158 DYNLL1P63167 89 aaKnown RBP19.05■□□□□ 0.64
SNRNP35-204ENST00000527158 EZH2Q15910 746 aaKnown RBP19.05■□□□□ 0.64
SNRNP35-204ENST00000527158 FOXD4L6Q3SYB3 417 aaPredicted RBP19.05■□□□□ 0.64
SNRNP35-204ENST00000527158 FOXD4L3Q6VB84 417 aaPredicted RBP19.05■□□□□ 0.64
SNRNP35-204ENST00000527158 TBC1D16Q8TBP0 767 aa19.05■□□□□ 0.64
SNRNP35-204ENST00000527158 ANP32BQ92688 251 aaKnown RBP19.05■□□□□ 0.64
SNRNP35-204ENST00000527158 TMEM87BQ96K49 555 aa19.05■□□□□ 0.64
SNRNP35-204ENST00000527158 GPR101Q96P66 508 aaPredicted RBP19.05■□□□□ 0.64
SNRNP35-204ENST00000527158 GPHNQ9NQX3 736 aaPredicted RBP19.05■□□□□ 0.64
SNRNP35-204ENST00000527158 ANGEL1Q9UNK9 670 aaKnown RBP19.05■□□□□ 0.64
SNRNP35-204ENST00000527158 JAG2Q9Y219 1238 aa19.05■□□□□ 0.64
SNRNP35-204ENST00000527158 MYH13Q9UKX3 1938 aa19.04■□□□□ 0.64
SNRNP35-204ENST00000527158 KLF18A0A0U1RQI7 1052 aa19.04■□□□□ 0.64
SNRNP35-204ENST00000527158 C6orf229H3BNL8 230 aa19.04■□□□□ 0.64
SNRNP35-204ENST00000527158 DHX16O60231 1041 aaKnown RBP19.04■□□□□ 0.64
SNRNP35-204ENST00000527158 EN1Q05925 392 aaPredicted RBP19.04■□□□□ 0.64
SNRNP35-204ENST00000527158 SLC15A2Q16348 729 aa19.04■□□□□ 0.64
SNRNP35-204ENST00000527158 MSL1Q68DK7 614 aa19.04■□□□□ 0.64
SNRNP35-204ENST00000527158 SMARCC2Q8TAQ2 1214 aa19.04■□□□□ 0.64
SNRNP35-204ENST00000527158 STAG1Q8WVM7 1258 aa19.04■□□□□ 0.64
SNRNP35-204ENST00000527158 TRIM44Q96DX7 344 aaPredicted RBP19.04■□□□□ 0.64
SNRNP35-204ENST00000527158 CAMKK2Q96RR4 588 aa19.04■□□□□ 0.64
SNRNP35-204ENST00000527158 CD209Q9NNX6 404 aa19.04■□□□□ 0.64
SNRNP35-204ENST00000527158 STK32BQ9NY57 414 aa19.04■□□□□ 0.64
SNRNP35-204ENST00000527158 ATP6V0A2Q9Y487 856 aa19.04■□□□□ 0.64
SNRNP35-204ENST00000527158 NEDD4P46934 1319 aa19.04■□□□□ 0.64
SNRNP35-204ENST00000527158 GIMAP6Q6P9H5 292 aa19.03■□□□□ 0.64
SNRNP35-204ENST00000527158 CYB5R4Q7L1T6 521 aa19.03■□□□□ 0.64
SNRNP35-204ENST00000527158 TMX4Q9H1E5 349 aaPredicted RBP19.03■□□□□ 0.64
SNRNP35-204ENST00000527158 NRXN2Q9P2S2 1712 aa19.03■□□□□ 0.64
SNRNP35-204ENST00000527158 PPARAQ07869 468 aa19.03■□□□□ 0.64
SNRNP35-204ENST00000527158 NSUN7Q8NE18 718 aaKnown RBP19.03■□□□□ 0.64
SNRNP35-204ENST00000527158 DDX11Q96FC9 970 aa19.03■□□□□ 0.64
SNRNP35-204ENST00000527158 CRNKL1Q9BZJ0 848 aaKnown RBP19.03■□□□□ 0.64
SNRNP35-204ENST00000527158 POLLQ9UGP5 575 aa19.03■□□□□ 0.64
SNRNP35-204ENST00000527158 MINDY4BA8MYZ0 360 aa19.02■□□□□ 0.64
SNRNP35-204ENST00000527158 IL1R1P14778 569 aa19.02■□□□□ 0.64
SNRNP35-204ENST00000527158 NCLP19338 710 aaKnown RBP19.02■□□□□ 0.64
SNRNP35-204ENST00000527158 GSTO1P78417 241 aa19.02■□□□□ 0.64
SNRNP35-204ENST00000527158 CCDC173Q0VFZ6 552 aa19.02■□□□□ 0.64
SNRNP35-204ENST00000527158 MASTLQ96GX5 879 aa19.02■□□□□ 0.64
SNRNP35-204ENST00000527158 NCOA5Q9HCD5 579 aaKnown RBP19.02■□□□□ 0.64
SNRNP35-204ENST00000527158 TOMM22Q9NS69 142 aa19.02■□□□□ 0.64
SNRNP35-204ENST00000527158 AATFQ9NY61 560 aaKnown RBP eCLIP19.02■□□□□ 0.64
SNRNP35-204ENST00000527158 PTPDC1A2A3K4 754 aa19.02■□□□□ 0.63
SNRNP35-204ENST00000527158 GOLGA8BA8MQT2 603 aa19.02■□□□□ 0.63
SNRNP35-204ENST00000527158 SH2B2O14492 632 aaPredicted RBP19.02■□□□□ 0.63
SNRNP35-204ENST00000527158 ZNF445P59923 1031 aa19.02■□□□□ 0.63
SNRNP35-204ENST00000527158 INCENPQ9NQS7 918 aa19.02■□□□□ 0.63
SNRNP35-204ENST00000527158 ANAPC4Q9UJX5 808 aa19.02■□□□□ 0.63
SNRNP35-204ENST00000527158 KDM4AO75164 1064 aa19.01■□□□□ 0.63
SNRNP35-204ENST00000527158 ZSWIM5Q9P217 1185 aa19.01■□□□□ 0.63
SNRNP35-204ENST00000527158 H3BQV1 296 aa19■□□□□ 0.63
SNRNP35-204ENST00000527158 CTDNEP1O95476 244 aa19■□□□□ 0.63
SNRNP35-204ENST00000527158 SF3B2Q13435 895 aaKnown RBP19■□□□□ 0.63
SNRNP35-204ENST00000527158 RRP12Q5JTH9 1297 aaKnown RBP19■□□□□ 0.63
SNRNP35-204ENST00000527158 IFFO2Q5TF58 517 aa19■□□□□ 0.63
SNRNP35-204ENST00000527158 CDC37L1Q7L3B6 337 aa19■□□□□ 0.63
SNRNP35-204ENST00000527158 SART3Q15020 963 aaKnown RBP19■□□□□ 0.63
SNRNP35-204ENST00000527158 CSPP1Q1MSJ5 1256 aa19■□□□□ 0.63
SNRNP35-204ENST00000527158 TMEM67Q5HYA8 995 aa19■□□□□ 0.63
SNRNP35-204ENST00000527158 IGDCC4Q8TDY8 1250 aa19■□□□□ 0.63
SNRNP35-204ENST00000527158 ATP8A2Q9NTI2 1148 aa19■□□□□ 0.63
SNRNP35-204ENST00000527158 ANKRD31Q8N7Z5 1873 aa19■□□□□ 0.63
SNRNP35-204ENST00000527158 IFIT3O14879 490 aaKnown RBP18.99■□□□□ 0.63
SNRNP35-204ENST00000527158 MBD3O95983 291 aa18.99■□□□□ 0.63
SNRNP35-204ENST00000527158 LDHCP07864 332 aa18.99■□□□□ 0.63
SNRNP35-204ENST00000527158 NFXL1Q6ZNB6 911 aa18.99■□□□□ 0.63
SNRNP35-204ENST00000527158 TIAM2Q8IVF5 1701 aa18.99■□□□□ 0.63
SNRNP35-204ENST00000527158 ESPNB1AK53 854 aa18.99■□□□□ 0.63
SNRNP35-204ENST00000527158 CPLX1O14810 134 aa18.99■□□□□ 0.63
SNRNP35-204ENST00000527158 LIFRP42702 1097 aa18.99■□□□□ 0.63
SNRNP35-204ENST00000527158 USP48Q86UV5 1035 aa18.99■□□□□ 0.63
SNRNP35-204ENST00000527158 GAS2L3Q86XJ1 694 aa18.99■□□□□ 0.63
SNRNP35-204ENST00000527158 MPNDQ8N594 471 aa18.99■□□□□ 0.63
SNRNP35-204ENST00000527158 NOL10Q9BSC4 688 aaKnown RBP18.99■□□□□ 0.63
SNRNP35-204ENST00000527158 MTA3Q9BTC8 594 aa18.99■□□□□ 0.63
SNRNP35-204ENST00000527158 HPS5Q9UPZ3 1129 aa18.99■□□□□ 0.63
SNRNP35-204ENST00000527158 CNPY2Q9Y2B0 182 aa18.99■□□□□ 0.63
SNRNP35-204ENST00000527158 ERICH2A1L162 156 aa18.98■□□□□ 0.63
SNRNP35-204ENST00000527158 BAG3O95817 575 aa18.98■□□□□ 0.63
SNRNP35-204ENST00000527158 TMEM87AQ8NBN3 555 aa18.98■□□□□ 0.63
SNRNP35-204ENST00000527158 NKX2-3Q8TAU0 364 aa18.98■□□□□ 0.63
SNRNP35-204ENST00000527158 TBC1D22AQ8WUA7 517 aa18.98■□□□□ 0.63
SNRNP35-204ENST00000527158 ZNF622Q969S3 477 aaKnown RBP eCLIP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms