RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 RBM26Q5T8P6 1007 aaKnown RBP19.91■□□□□ 0.78
CAPN1-205ENST00000526954 PNMA8AQ86V59 439 aaPredicted RBP19.91■□□□□ 0.78
CAPN1-205ENST00000526954 OSBP2Q969R2 916 aa19.91■□□□□ 0.78
CAPN1-205ENST00000526954 RIOK1Q9BRS2 568 aaKnown RBP19.91■□□□□ 0.78
CAPN1-205ENST00000526954 NOL10Q9BSC4 688 aaKnown RBP19.91■□□□□ 0.78
CAPN1-205ENST00000526954 PUS7LQ9H0K6 701 aaKnown RBP19.91■□□□□ 0.78
CAPN1-205ENST00000526954 HELLSQ9NRZ9 838 aa19.91■□□□□ 0.78
CAPN1-205ENST00000526954 DIAPH3Q9NSV4 1193 aa19.91■□□□□ 0.78
CAPN1-205ENST00000526954 CDK5RAP2Q96SN8 1893 aa19.9■□□□□ 0.78
CAPN1-205ENST00000526954 MAGEB6P1A0A0J9YX57 407 aa19.9■□□□□ 0.78
CAPN1-205ENST00000526954 PLCG2P16885 1265 aa19.9■□□□□ 0.78
CAPN1-205ENST00000526954 NMIQ13287 307 aaPredicted RBP19.9■□□□□ 0.78
CAPN1-205ENST00000526954 NBPF9Q3BBW0 867 aa19.9■□□□□ 0.78
CAPN1-205ENST00000526954 NMRK2Q9NPI5 230 aa19.9■□□□□ 0.78
CAPN1-205ENST00000526954 AATFQ9NY61 560 aaKnown RBP eCLIP19.9■□□□□ 0.786e-6■■■■■ 54.7
CAPN1-205ENST00000526954 MYO1BO43795 1136 aa19.89■□□□□ 0.77
CAPN1-205ENST00000526954 CDC45O75419 566 aa19.89■□□□□ 0.77
CAPN1-205ENST00000526954 YY1P25490 414 aa19.89■□□□□ 0.77
CAPN1-205ENST00000526954 RHBDL3P58872 404 aa19.89■□□□□ 0.77
CAPN1-205ENST00000526954 SPDYE2Q495Y8 402 aa19.89■□□□□ 0.77
CAPN1-205ENST00000526954 FOCADQ5VW36 1801 aa19.89■□□□□ 0.77
CAPN1-205ENST00000526954 CDC42EP5Q6NZY7 148 aa19.89■□□□□ 0.77
CAPN1-205ENST00000526954 MIGA1Q8NAN2 632 aa19.89■□□□□ 0.77
CAPN1-205ENST00000526954 ZNF526Q8TF50 670 aaPredicted RBP19.89■□□□□ 0.77
CAPN1-205ENST00000526954 FAM227BQ96M60 508 aa19.89■□□□□ 0.77
CAPN1-205ENST00000526954 PGAP2Q9UHJ9 254 aa19.89■□□□□ 0.77
CAPN1-205ENST00000526954 A0A0D9SFI3 127 aa19.88■□□□□ 0.77
CAPN1-205ENST00000526954 DYNLL1P63167 89 aaKnown RBP19.88■□□□□ 0.77
CAPN1-205ENST00000526954 MCMDC2Q4G0Z9 681 aa19.88■□□□□ 0.77
CAPN1-205ENST00000526954 ZC3H15Q8WU90 426 aaKnown RBP19.88■□□□□ 0.77
CAPN1-205ENST00000526954 AIDAQ96BJ3 306 aa19.88■□□□□ 0.77
CAPN1-205ENST00000526954 SEC62Q99442 399 aaKnown RBP19.88■□□□□ 0.77
CAPN1-205ENST00000526954 TDRD3Q9H7E2 651 aaKnown RBP19.88■□□□□ 0.77
CAPN1-205ENST00000526954 GPBP1L1Q9HC44 474 aaPredicted RBP19.88■□□□□ 0.77
CAPN1-205ENST00000526954 USP40Q9NVE5 1235 aa19.88■□□□□ 0.77
CAPN1-205ENST00000526954 ZNF70Q9UC06 446 aaPredicted RBP19.88■□□□□ 0.77
CAPN1-205ENST00000526954 POLR2AP24928 1970 aaKnown RBP19.88■□□□□ 0.77
CAPN1-205ENST00000526954 M0R2C6 588 aa19.87■□□□□ 0.77
CAPN1-205ENST00000526954 MBD4O95243 580 aa19.87■□□□□ 0.77
CAPN1-205ENST00000526954 CWC27Q6UX04 472 aaKnown RBP19.87■□□□□ 0.77
CAPN1-205ENST00000526954 SH3RF3Q8TEJ3 882 aaPredicted RBP19.87■□□□□ 0.77
CAPN1-205ENST00000526954 RUFY2Q8WXA3 655 aa19.87■□□□□ 0.77
CAPN1-205ENST00000526954 STRBPQ96SI9 672 aaKnown RBP19.87■□□□□ 0.77
CAPN1-205ENST00000526954 RAD50Q92878 1312 aa19.86■□□□□ 0.77
CAPN1-205ENST00000526954 PITPNM2Q9BZ72 1349 aa19.86■□□□□ 0.77
CAPN1-205ENST00000526954 GPAA1O43292 621 aa19.86■□□□□ 0.77
CAPN1-205ENST00000526954 FKBP1CQ5VVH2 108 aa19.86■□□□□ 0.77
CAPN1-205ENST00000526954 LCORLQ8N3X6 602 aa19.86■□□□□ 0.77
CAPN1-205ENST00000526954 IDI2Q9BXS1 227 aa19.86■□□□□ 0.77
CAPN1-205ENST00000526954 ARMT1Q9H993 441 aa19.86■□□□□ 0.77
CAPN1-205ENST00000526954 ASTN2O75129 1339 aaPredicted RBP19.85■□□□□ 0.77
CAPN1-205ENST00000526954 NPM3O75607 178 aaKnown RBP19.85■□□□□ 0.77
CAPN1-205ENST00000526954 WDHD1O75717 1129 aaPredicted RBP19.85■□□□□ 0.77
CAPN1-205ENST00000526954 CASC1Q6TDU7 716 aa19.85■□□□□ 0.77
CAPN1-205ENST00000526954 TMOD2Q9NZR1 351 aa19.85■□□□□ 0.77
CAPN1-205ENST00000526954 CLRN2A0PK11 232 aa19.84■□□□□ 0.77
CAPN1-205ENST00000526954 GNAT2P19087 354 aa19.84■□□□□ 0.77
CAPN1-205ENST00000526954 MFAP1P55081 439 aaKnown RBP19.84■□□□□ 0.77
CAPN1-205ENST00000526954 EAPPQ56P03 285 aaPredicted RBP19.84■□□□□ 0.77
CAPN1-205ENST00000526954 TEX11Q8IYF3 940 aa19.84■□□□□ 0.77
CAPN1-205ENST00000526954 CRNKL1Q9BZJ0 848 aaKnown RBP19.84■□□□□ 0.77
CAPN1-205ENST00000526954 RPAP1Q9BWH6 1393 aaPredicted RBP19.83■□□□□ 0.77
CAPN1-205ENST00000526954 CCDC171Q6TFL3 1326 aa19.83■□□□□ 0.77
CAPN1-205ENST00000526954 SGSM2O43147 1006 aa19.83■□□□□ 0.77
CAPN1-205ENST00000526954 ANGEL2Q5VTE6 544 aaKnown RBP19.83■□□□□ 0.77
CAPN1-205ENST00000526954 CCDC129Q6ZRS4 1044 aa19.83■□□□□ 0.77
CAPN1-205ENST00000526954 ZNF589Q86UQ0 364 aaPredicted RBP19.83■□□□□ 0.77
CAPN1-205ENST00000526954 LDHDQ86WU2 507 aa19.83■□□□□ 0.77
CAPN1-205ENST00000526954 APOBEC3FQ8IUX4 373 aaKnown RBP19.83■□□□□ 0.77
CAPN1-205ENST00000526954 GGA3Q9NZ52 723 aa19.83■□□□□ 0.77
CAPN1-205ENST00000526954 TNFAIP1Q13829 316 aa19.82■□□□□ 0.76
CAPN1-205ENST00000526954 FAM83AQ86UY5 434 aa19.82■□□□□ 0.76
CAPN1-205ENST00000526954 ZNF784Q8NCA9 323 aaPredicted RBP19.82■□□□□ 0.76
CAPN1-205ENST00000526954 TGFBRAP1Q8WUH2 860 aa19.82■□□□□ 0.76
CAPN1-205ENST00000526954 DCPSQ96C86 337 aaKnown RBP19.82■□□□□ 0.76
CAPN1-205ENST00000526954 ESYT1Q9BSJ8 1104 aa19.82■□□□□ 0.76
CAPN1-205ENST00000526954 IL25Q9H293 177 aa19.82■□□□□ 0.76
CAPN1-205ENST00000526954 ATP8A2Q9NTI2 1148 aa19.82■□□□□ 0.76
CAPN1-205ENST00000526954 FAM198AQ9UFP1 575 aa19.82■□□□□ 0.76
CAPN1-205ENST00000526954 MKRN1Q9UHC7 482 aaKnown RBP19.82■□□□□ 0.76
CAPN1-205ENST00000526954 MYH1P12882 1939 aa19.81■□□□□ 0.76
CAPN1-205ENST00000526954 PATL2C9JE40 543 aaKnown RBP19.81■□□□□ 0.76
CAPN1-205ENST00000526954 KIF3CO14782 793 aa19.81■□□□□ 0.76
CAPN1-205ENST00000526954 PRKAB2O43741 272 aa19.81■□□□□ 0.76
CAPN1-205ENST00000526954 ENTPD3O75355 529 aa19.81■□□□□ 0.76
CAPN1-205ENST00000526954 CACNB3P54284 484 aa19.81■□□□□ 0.76
CAPN1-205ENST00000526954 NFIAQ12857 509 aa19.81■□□□□ 0.76
CAPN1-205ENST00000526954 GIMAP6Q6P9H5 292 aa19.81■□□□□ 0.76
CAPN1-205ENST00000526954 VEZTQ9HBM0 779 aa19.81■□□□□ 0.76
CAPN1-205ENST00000526954 SLC4A4Q9Y6R1 1079 aa19.81■□□□□ 0.76
CAPN1-205ENST00000526954 NAV1Q8NEY1 1877 aa19.8■□□□□ 0.76
CAPN1-205ENST00000526954 GSG1L2A8MUP6 293 aa19.8■□□□□ 0.76
CAPN1-205ENST00000526954 TCP10L2B9ZVM9 353 aa19.8■□□□□ 0.76
CAPN1-205ENST00000526954 POTEIP0CG38 1075 aa19.8■□□□□ 0.76
CAPN1-205ENST00000526954 POTEJP0CG39 1038 aa19.8■□□□□ 0.76
CAPN1-205ENST00000526954 USP5P45974 858 aa19.8■□□□□ 0.76
CAPN1-205ENST00000526954 DDX4Q9NQI0 724 aaKnown RBP19.8■□□□□ 0.76
CAPN1-205ENST00000526954 CNTNAP1P78357 1384 aa19.8■□□□□ 0.76
CAPN1-205ENST00000526954 BAZ2AQ9UIF9 1905 aaKnown RBP19.8■□□□□ 0.76
CAPN1-205ENST00000526954 DDX60LQ5H9U9 1706 aaKnown RBP19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms