RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 METAP2P50579 478 aaKnown RBP eCLIP13.51□□□□□ -0.25
LINC01001-201ENST00000526704 TRDNQ13061 729 aa13.51□□□□□ -0.25
LINC01001-201ENST00000526704 HLFQ16534 295 aa13.51□□□□□ -0.25
LINC01001-201ENST00000526704 ARMCX5Q6P1M9 558 aa13.51□□□□□ -0.25
LINC01001-201ENST00000526704 GIGYF2Q6Y7W6 1299 aaKnown RBP13.51□□□□□ -0.25
LINC01001-201ENST00000526704 LDHAL6AQ6ZMR3 332 aa13.51□□□□□ -0.25
LINC01001-201ENST00000526704 NLRP10Q86W26 655 aa13.51□□□□□ -0.25
LINC01001-201ENST00000526704 VPS37DQ86XT2 251 aa13.51□□□□□ -0.25
LINC01001-201ENST00000526704 ALG1Q9BT22 464 aa13.51□□□□□ -0.25
LINC01001-201ENST00000526704 KAT6BQ8WYB5 2073 aa13.51□□□□□ -0.25
LINC01001-201ENST00000526704 GPTP24298 496 aa13.51□□□□□ -0.25
LINC01001-201ENST00000526704 CDC27P30260 824 aa13.51□□□□□ -0.25
LINC01001-201ENST00000526704 CTSWP56202 376 aa13.51□□□□□ -0.25
LINC01001-201ENST00000526704 APOA5Q6Q788 366 aa13.51□□□□□ -0.25
LINC01001-201ENST00000526704 TMC6Q7Z403 805 aa13.51□□□□□ -0.25
LINC01001-201ENST00000526704 ZNF532Q9HCE3 1301 aa13.5□□□□□ -0.25
LINC01001-201ENST00000526704 DMTNQ08495 405 aa13.5□□□□□ -0.25
LINC01001-201ENST00000526704 KRT40Q6A162 431 aa13.5□□□□□ -0.25
LINC01001-201ENST00000526704 CCDC150Q8NCX0 1101 aa13.5□□□□□ -0.25
LINC01001-201ENST00000526704 STRN4Q9NRL3 753 aa13.5□□□□□ -0.25
LINC01001-201ENST00000526704 HPSEQ9Y251 543 aa13.5□□□□□ -0.25
LINC01001-201ENST00000526704 SOS2Q07890 1332 aaPredicted RBP13.5□□□□□ -0.25
LINC01001-201ENST00000526704 TCRBV5S4A2TA0A5A2 114 aa13.5□□□□□ -0.25
LINC01001-201ENST00000526704 B4E1Z4 1266 aa13.5□□□□□ -0.25
LINC01001-201ENST00000526704 PTPAQ15257 358 aa13.5□□□□□ -0.25
LINC01001-201ENST00000526704 TTF1Q15361 905 aaPredicted RBP13.5□□□□□ -0.25
LINC01001-201ENST00000526704 UBE3CQ15386 1083 aa13.5□□□□□ -0.25
LINC01001-201ENST00000526704 PIGBQ92521 554 aa13.5□□□□□ -0.25
LINC01001-201ENST00000526704 PHKBQ93100 1093 aa13.5□□□□□ -0.25
LINC01001-201ENST00000526704 TIGD1Q96MW7 591 aa13.5□□□□□ -0.25
LINC01001-201ENST00000526704 HSD3B7Q9H2F3 369 aa13.5□□□□□ -0.25
LINC01001-201ENST00000526704 CNNM1Q9NRU3 951 aa13.5□□□□□ -0.25
LINC01001-201ENST00000526704 CGNQ9P2M7 1197 aaKnown RBP13.5□□□□□ -0.25
LINC01001-201ENST00000526704 WWC3Q9ULE0 1092 aa13.5□□□□□ -0.25
LINC01001-201ENST00000526704 ANKRD18BA2A2Z9 1011 aa13.49□□□□□ -0.25
LINC01001-201ENST00000526704 IDH1O75874 414 aaKnown RBP13.49□□□□□ -0.25
LINC01001-201ENST00000526704 CDKL5O76039 1030 aa13.49□□□□□ -0.25
LINC01001-201ENST00000526704 PDE6AP16499 860 aa13.49□□□□□ -0.25
LINC01001-201ENST00000526704 ARID4AP29374 1257 aaPredicted RBP13.49□□□□□ -0.25
LINC01001-201ENST00000526704 E4F1Q66K89 784 aaPredicted RBP13.49□□□□□ -0.25
LINC01001-201ENST00000526704 SHC4Q6S5L8 630 aa13.49□□□□□ -0.25
LINC01001-201ENST00000526704 MICU3Q86XE3 530 aa13.49□□□□□ -0.25
LINC01001-201ENST00000526704 MAP3K14Q99558 947 aa13.49□□□□□ -0.25
LINC01001-201ENST00000526704 TEX13AQ9BXU3 409 aaPredicted RBP13.49□□□□□ -0.25
LINC01001-201ENST00000526704 TUBE1Q9UJT0 475 aa13.49□□□□□ -0.25
LINC01001-201ENST00000526704 ZNF215Q9UL58 517 aaPredicted RBP13.49□□□□□ -0.25
LINC01001-201ENST00000526704 SLIT2O94813 1529 aa13.49□□□□□ -0.25
LINC01001-201ENST00000526704 RANBP6O60518 1105 aaKnown RBP13.49□□□□□ -0.25
LINC01001-201ENST00000526704 PPP6R2O75170 966 aa13.49□□□□□ -0.25
LINC01001-201ENST00000526704 SYKP43405 635 aa13.49□□□□□ -0.25
LINC01001-201ENST00000526704 PHKA1P46020 1223 aa13.49□□□□□ -0.25
LINC01001-201ENST00000526704 NTRK3Q16288 839 aa13.49□□□□□ -0.25
LINC01001-201ENST00000526704 FEZ1Q99689 392 aa13.49□□□□□ -0.25
LINC01001-201ENST00000526704 LY9Q9HBG7 655 aa13.49□□□□□ -0.25
LINC01001-201ENST00000526704 PHLPP1O60346 1717 aa13.49□□□□□ -0.25
LINC01001-201ENST00000526704 PLCH1Q4KWH8 1693 aa13.49□□□□□ -0.25
LINC01001-201ENST00000526704 FAM237AA0A1B0GTK4 181 aa13.48□□□□□ -0.25
LINC01001-201ENST00000526704 IKBKBO14920 756 aa13.48□□□□□ -0.25
LINC01001-201ENST00000526704 APPP05067 770 aa13.48□□□□□ -0.25
LINC01001-201ENST00000526704 TPM4P67936 248 aa13.48□□□□□ -0.25
LINC01001-201ENST00000526704 UTP14CQ5TAP6 766 aaKnown RBP13.48□□□□□ -0.25
LINC01001-201ENST00000526704 CCDC102BQ68D86 513 aa13.48□□□□□ -0.25
LINC01001-201ENST00000526704 IGDCC4Q8TDY8 1250 aa13.48□□□□□ -0.25
LINC01001-201ENST00000526704 UBN2Q6ZU65 1347 aa13.48□□□□□ -0.25
LINC01001-201ENST00000526704 PDE8BO95263 885 aa13.48□□□□□ -0.25
LINC01001-201ENST00000526704 STARD3NLO95772 234 aa13.48□□□□□ -0.25
LINC01001-201ENST00000526704 LMOD1P29536 600 aaPredicted RBP13.48□□□□□ -0.25
LINC01001-201ENST00000526704 FANCCQ00597 558 aa13.48□□□□□ -0.25
LINC01001-201ENST00000526704 RESP18Q5W5W9 173 aa13.48□□□□□ -0.25
LINC01001-201ENST00000526704 ISM2Q6H9L7 571 aa13.48□□□□□ -0.25
LINC01001-201ENST00000526704 TMEM87BQ96K49 555 aa13.48□□□□□ -0.25
LINC01001-201ENST00000526704 PPP1R13BQ96KQ4 1090 aa13.48□□□□□ -0.25
LINC01001-201ENST00000526704 BCL11BQ9C0K0 894 aaPredicted RBP13.48□□□□□ -0.25
LINC01001-201ENST00000526704 EPB41L4AQ9HCS5 686 aaPredicted RBP13.48□□□□□ -0.25
LINC01001-201ENST00000526704 FAM217BQ9NTX9 383 aaPredicted RBP13.48□□□□□ -0.25
LINC01001-201ENST00000526704 IRS4O14654 1257 aaPredicted RBP13.47□□□□□ -0.25
LINC01001-201ENST00000526704 ZBTB43O43298 467 aa13.47□□□□□ -0.25
LINC01001-201ENST00000526704 ATP1A3P13637 1013 aa13.47□□□□□ -0.25
LINC01001-201ENST00000526704 SFPQP23246 707 aaKnown RBP eCLIP13.47□□□□□ -0.25
LINC01001-201ENST00000526704 MYH2Q9UKX2 1941 aa13.47□□□□□ -0.25
LINC01001-201ENST00000526704 GOLGA8AA7E2F4 631 aa13.47□□□□□ -0.25
LINC01001-201ENST00000526704 UBE2Q2LH0YL09 131 aa13.47□□□□□ -0.25
LINC01001-201ENST00000526704 KIF2AO00139 706 aaPredicted RBP13.47□□□□□ -0.25
LINC01001-201ENST00000526704 KCNJ6P48051 423 aa13.47□□□□□ -0.25
LINC01001-201ENST00000526704 PNOCQ13519 176 aa13.47□□□□□ -0.25
LINC01001-201ENST00000526704 SGMS1Q86VZ5 419 aa13.47□□□□□ -0.25
LINC01001-201ENST00000526704 KIF18AQ8NI77 898 aa13.47□□□□□ -0.25
LINC01001-201ENST00000526704 CLIC6Q96NY7 704 aa13.47□□□□□ -0.25
LINC01001-201ENST00000526704 STRBPQ96SI9 672 aaKnown RBP13.47□□□□□ -0.25
LINC01001-201ENST00000526704 MYL10Q9BUA6 226 aa13.47□□□□□ -0.25
LINC01001-201ENST00000526704 INCENPQ9NQS7 918 aa13.47□□□□□ -0.25
LINC01001-201ENST00000526704 WNK3Q9BYP7 1800 aa13.47□□□□□ -0.25
LINC01001-201ENST00000526704 CPLX2Q6PUV4 134 aaKnown RBP13.46□□□□□ -0.25
LINC01001-201ENST00000526704 JMYQ8N9B5 988 aa13.46□□□□□ -0.25
LINC01001-201ENST00000526704 OGFRQ9NZT2 677 aa13.46□□□□□ -0.25
LINC01001-201ENST00000526704 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.46□□□□□ -0.25
LINC01001-201ENST00000526704 TAOK2Q9UL54 1235 aa13.46□□□□□ -0.25
LINC01001-201ENST00000526704 TACC3Q9Y6A5 838 aa13.46□□□□□ -0.25
LINC01001-201ENST00000526704 V9GYY5 206 aaPredicted RBP13.46□□□□□ -0.25
LINC01001-201ENST00000526704 STK36Q9NRP7 1315 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms