RNA–Protein interactions for RNA: ENST00000526009.5

CLNS1A-205, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 747 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-205ENST00000526009 LIMD1Q9UGP4 676 aa9.71□□□□□ -0.86
CLNS1A-205ENST00000526009 ZNF609O15014 1411 aa9.71□□□□□ -0.86
CLNS1A-205ENST00000526009 USP17L3A6NCW0 530 aa9.7□□□□□ -0.86
CLNS1A-205ENST00000526009 USP17L4A6NCW7 530 aa9.7□□□□□ -0.86
CLNS1A-205ENST00000526009 NF2P35240 595 aa9.7□□□□□ -0.86
CLNS1A-205ENST00000526009 CLK2P49760 499 aaKnown RBP9.7□□□□□ -0.86
CLNS1A-205ENST00000526009 NBPF9Q3BBW0 867 aa9.7□□□□□ -0.86
CLNS1A-205ENST00000526009 SH3D19Q5HYK7 790 aa9.7□□□□□ -0.86
CLNS1A-205ENST00000526009 USP17L1Q7RTZ2 530 aa9.7□□□□□ -0.86
CLNS1A-205ENST00000526009 PODNQ7Z5L7 613 aa9.7□□□□□ -0.86
CLNS1A-205ENST00000526009 PROCA1Q8NCQ7 364 aaPredicted RBP9.7□□□□□ -0.86
CLNS1A-205ENST00000526009 GMLQ99445 158 aa9.7□□□□□ -0.86
CLNS1A-205ENST00000526009 R3HDMLQ9H3Y0 253 aa9.7□□□□□ -0.86
CLNS1A-205ENST00000526009 SEC31BQ9NQW1 1179 aa9.7□□□□□ -0.86
CLNS1A-205ENST00000526009 CHPF2Q9P2E5 772 aa9.7□□□□□ -0.86
CLNS1A-205ENST00000526009 PCDHGC3Q9UN70 934 aa9.7□□□□□ -0.86
CLNS1A-205ENST00000526009 TRIM17Q9Y577 477 aa9.7□□□□□ -0.86
CLNS1A-205ENST00000526009 SPTLC1O15269 473 aa9.69□□□□□ -0.86
CLNS1A-205ENST00000526009 ALDH1A1P00352 501 aa9.69□□□□□ -0.86
CLNS1A-205ENST00000526009 HSP90B1P14625 803 aaKnown RBP9.69□□□□□ -0.86
CLNS1A-205ENST00000526009 TRIM28Q13263 835 aaKnown RBP9.69□□□□□ -0.86
CLNS1A-205ENST00000526009 SCN9AQ15858 1988 aa9.69□□□□□ -0.86
CLNS1A-205ENST00000526009 Q3C1V9 767 aa9.69□□□□□ -0.86
CLNS1A-205ENST00000526009 ARMC9Q7Z3E5 817 aa9.69□□□□□ -0.86
CLNS1A-205ENST00000526009 OGFOD1Q8N543 542 aa9.69□□□□□ -0.86
CLNS1A-205ENST00000526009 SYMPKQ92797 1274 aaKnown RBP9.69□□□□□ -0.86
CLNS1A-205ENST00000526009 PCMTD1Q96MG8 357 aaPredicted RBP9.69□□□□□ -0.86
CLNS1A-205ENST00000526009 PCDHB15Q9Y5E8 787 aa9.69□□□□□ -0.86
CLNS1A-205ENST00000526009 DDX60Q8IY21 1712 aaKnown RBP9.68□□□□□ -0.86
CLNS1A-205ENST00000526009 WNT10BO00744 389 aa9.68□□□□□ -0.86
CLNS1A-205ENST00000526009 FMNL1O95466 1100 aaPredicted RBP9.68□□□□□ -0.86
CLNS1A-205ENST00000526009 ATP2B4P23634 1241 aa9.68□□□□□ -0.86
CLNS1A-205ENST00000526009 INHBEP58166 350 aa9.68□□□□□ -0.86
CLNS1A-205ENST00000526009 PTPN12Q05209 780 aaKnown RBP9.68□□□□□ -0.86
CLNS1A-205ENST00000526009 LMOD3Q0VAK6 560 aa9.68□□□□□ -0.86
CLNS1A-205ENST00000526009 KRT24Q2M2I5 525 aa9.68□□□□□ -0.86
CLNS1A-205ENST00000526009 ZBTB38Q8NAP3 1195 aaPredicted RBP9.68□□□□□ -0.86
CLNS1A-205ENST00000526009 DBF4Q9UBU7 674 aaPredicted RBP9.68□□□□□ -0.86
CLNS1A-205ENST00000526009 HTTP42858 3142 aa9.67□□□□□ -0.86
CLNS1A-205ENST00000526009 XDHP47989 1333 aa9.67□□□□□ -0.86
CLNS1A-205ENST00000526009 CHL1O00533 1208 aa9.67□□□□□ -0.86
CLNS1A-205ENST00000526009 TLL1O43897 1013 aa9.67□□□□□ -0.86
CLNS1A-205ENST00000526009 FXR1P51114 621 aaKnown RBP eCLIP9.67□□□□□ -0.86
CLNS1A-205ENST00000526009 PRKG1Q13976 671 aa9.67□□□□□ -0.86
CLNS1A-205ENST00000526009 CCDC152Q4G0S7 254 aa9.67□□□□□ -0.86
CLNS1A-205ENST00000526009 HDGFL1Q5TGJ6 251 aa9.67□□□□□ -0.86
CLNS1A-205ENST00000526009 SPRYD7Q5W111 196 aa9.67□□□□□ -0.86
CLNS1A-205ENST00000526009 OTOP1Q7RTM1 612 aa9.67□□□□□ -0.86
CLNS1A-205ENST00000526009 SPSB2Q99619 263 aa9.67□□□□□ -0.86
CLNS1A-205ENST00000526009 PLA2G2EQ9NZK7 142 aa9.67□□□□□ -0.86
CLNS1A-205ENST00000526009 COL4A1P02462 1669 aa9.67□□□□□ -0.86
CLNS1A-205ENST00000526009 MANSC4A6NHS7 340 aaPredicted RBP9.66□□□□□ -0.86
CLNS1A-205ENST00000526009 GJA5P36382 358 aa9.66□□□□□ -0.86
CLNS1A-205ENST00000526009 TMPOP42166 694 aaKnown RBP9.66□□□□□ -0.86
CLNS1A-205ENST00000526009 MMP14P50281 582 aa9.66□□□□□ -0.86
CLNS1A-205ENST00000526009 LDLRAD1Q5T700 205 aa9.66□□□□□ -0.86
CLNS1A-205ENST00000526009 RNF19BQ6ZMZ0 732 aa9.66□□□□□ -0.86
CLNS1A-205ENST00000526009 ANKRD18AQ8IVF6 992 aa9.66□□□□□ -0.86
CLNS1A-205ENST00000526009 NKX2-3Q8TAU0 364 aa9.66□□□□□ -0.86
CLNS1A-205ENST00000526009 SLC10A4Q96EP9 437 aa9.66□□□□□ -0.86
CLNS1A-205ENST00000526009 HYPKQ9NX55 129 aa9.66□□□□□ -0.86
CLNS1A-205ENST00000526009 ANGEL1Q9UNK9 670 aaKnown RBP9.66□□□□□ -0.86
CLNS1A-205ENST00000526009 LAS1LQ9Y4W2 734 aaKnown RBP9.66□□□□□ -0.86
CLNS1A-205ENST00000526009 SZT2Q5T011 3432 aa9.65□□□□□ -0.86
CLNS1A-205ENST00000526009 MYO3BQ8WXR4 1341 aa9.65□□□□□ -0.86
CLNS1A-205ENST00000526009 PDE8AO60658 829 aa9.65□□□□□ -0.86
CLNS1A-205ENST00000526009 HOXB7P09629 217 aa9.65□□□□□ -0.86
CLNS1A-205ENST00000526009 EN2P19622 333 aaPredicted RBP9.65□□□□□ -0.86
CLNS1A-205ENST00000526009 DACT2Q5SW24 774 aa9.65□□□□□ -0.86
CLNS1A-205ENST00000526009 STRIP1Q5VSL9 837 aa9.65□□□□□ -0.86
CLNS1A-205ENST00000526009 BRICD5Q6PL45 260 aa9.65□□□□□ -0.86
CLNS1A-205ENST00000526009 APOBEC3FQ8IUX4 373 aaKnown RBP9.65□□□□□ -0.86
CLNS1A-205ENST00000526009 ERO1AQ96HE7 468 aa9.65□□□□□ -0.86
CLNS1A-205ENST00000526009 CCDC85AQ96PX6 553 aaPredicted RBP9.65□□□□□ -0.86
CLNS1A-205ENST00000526009 MXD3Q9BW11 206 aa9.65□□□□□ -0.86
CLNS1A-205ENST00000526009 GOPCQ9HD26 462 aa9.65□□□□□ -0.86
CLNS1A-205ENST00000526009 PTPN22Q9Y2R2 807 aa9.65□□□□□ -0.86
CLNS1A-205ENST00000526009 SASH1O94885 1247 aa9.64□□□□□ -0.87
CLNS1A-205ENST00000526009 MTMR2Q13614 643 aa9.64□□□□□ -0.87
CLNS1A-205ENST00000526009 CCDC191Q8NCU4 936 aa9.64□□□□□ -0.87
CLNS1A-205ENST00000526009 KIAA0100Q14667 2235 aaKnown RBP9.64□□□□□ -0.87
CLNS1A-205ENST00000526009 MED23Q9ULK4 1368 aa9.63□□□□□ -0.87
CLNS1A-205ENST00000526009 WTIPA6NIX2 430 aaPredicted RBP9.63□□□□□ -0.87
CLNS1A-205ENST00000526009 IGF2BP3O00425 579 aaKnown RBP eCLIP9.63□□□□□ -0.872e-6■■□□□ 11.4
CLNS1A-205ENST00000526009 PPP1R12BO60237 982 aaPredicted RBP9.63□□□□□ -0.87
CLNS1A-205ENST00000526009 PCCAP05165 728 aaPredicted RBP9.63□□□□□ -0.87
CLNS1A-205ENST00000526009 ZBTB48P10074 688 aaPredicted RBP9.63□□□□□ -0.87
CLNS1A-205ENST00000526009 QPCTQ16769 361 aa9.63□□□□□ -0.87
CLNS1A-205ENST00000526009 OTUD7BQ6GQQ9 843 aa9.63□□□□□ -0.87
CLNS1A-205ENST00000526009 JARID2Q92833 1246 aaPredicted RBP9.63□□□□□ -0.87
CLNS1A-205ENST00000526009 ARMC5Q96C12 935 aa9.63□□□□□ -0.87
CLNS1A-205ENST00000526009 THAP11Q96EK4 314 aa9.63□□□□□ -0.87
CLNS1A-205ENST00000526009 CDC5LQ99459 802 aaKnown RBP9.63□□□□□ -0.87
CLNS1A-205ENST00000526009 MYD88Q99836 296 aa9.63□□□□□ -0.87
CLNS1A-205ENST00000526009 USB1Q9BQ65 265 aaKnown RBP9.63□□□□□ -0.87
CLNS1A-205ENST00000526009 COA1Q9GZY4 146 aa9.63□□□□□ -0.87
CLNS1A-205ENST00000526009 EFCC1Q9HA90 598 aa9.63□□□□□ -0.87
CLNS1A-205ENST00000526009 FZD1Q9UP38 647 aa9.63□□□□□ -0.87
CLNS1A-205ENST00000526009 SALL2Q9Y467 1007 aaPredicted RBP9.63□□□□□ -0.87
CLNS1A-205ENST00000526009 ADH1BP00325 375 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms