RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 ASPAP45381 313 aa8.42□□□□□ -1.06
CSDE1-210ENST00000525878 CYP27A1Q02318 531 aa8.42□□□□□ -1.06
CSDE1-210ENST00000525878 FAAP100Q0VG06 881 aa8.42□□□□□ -1.06
CSDE1-210ENST00000525878 COL19A1Q14993 1142 aa8.42□□□□□ -1.06
CSDE1-210ENST00000525878 ZNF765Q7L2R6 523 aa8.42□□□□□ -1.06
CSDE1-210ENST00000525878 ALKBH8Q96BT7 664 aaKnown RBP8.42□□□□□ -1.06
CSDE1-210ENST00000525878 FBXL18Q96ME1 805 aa8.42□□□□□ -1.06
CSDE1-210ENST00000525878 NIF3L1Q9GZT8 377 aa8.42□□□□□ -1.06
CSDE1-210ENST00000525878 PPP1R9AQ9ULJ8 1098 aa8.42□□□□□ -1.06
CSDE1-210ENST00000525878 AP4E1Q9UPM8 1137 aa8.42□□□□□ -1.06
CSDE1-210ENST00000525878 DYNC1LI2O43237 492 aaPredicted RBP8.41□□□□□ -1.06
CSDE1-210ENST00000525878 GRM2Q14416 872 aa8.41□□□□□ -1.06
CSDE1-210ENST00000525878 DUSP27Q5VZP5 1158 aa8.41□□□□□ -1.06
CSDE1-210ENST00000525878 RBCK1Q9BYM8 510 aa8.41□□□□□ -1.06
CSDE1-210ENST00000525878 ZC3H7BQ9UGR2 993 aaKnown RBP8.41□□□□□ -1.06
CSDE1-210ENST00000525878 TMPRSS2O15393 492 aa8.4□□□□□ -1.06
CSDE1-210ENST00000525878 OGFOD3Q6PK18 319 aa8.4□□□□□ -1.06
CSDE1-210ENST00000525878 DMRTB1Q96MA1 342 aa8.4□□□□□ -1.06
CSDE1-210ENST00000525878 CSRNP1Q96S65 589 aa8.4□□□□□ -1.06
CSDE1-210ENST00000525878 TRAK1Q9UPV9 953 aa8.4□□□□□ -1.06
CSDE1-210ENST00000525878 PDE3AQ14432 1141 aa8.39□□□□□ -1.07
CSDE1-210ENST00000525878 WDR89Q96FK6 387 aaPredicted RBP8.39□□□□□ -1.07
CSDE1-210ENST00000525878 CCDC86Q9H6F5 360 aaKnown RBP8.39□□□□□ -1.07
CSDE1-210ENST00000525878 CRIM1Q9NZV1 1036 aa8.39□□□□□ -1.07
CSDE1-210ENST00000525878 EPS8L3Q8TE67 593 aaKnown RBP8.38□□□□□ -1.07
CSDE1-210ENST00000525878 PAK6Q9NQU5 681 aaPredicted RBP8.38□□□□□ -1.07
CSDE1-210ENST00000525878 PCDHGC5Q9Y5F6 944 aa8.38□□□□□ -1.07
CSDE1-210ENST00000525878 BTBD11A6QL63 1104 aa8.37□□□□□ -1.07
CSDE1-210ENST00000525878 ZNF862O60290 1169 aa8.37□□□□□ -1.07
CSDE1-210ENST00000525878 GADD45BO75293 160 aaPredicted RBP8.37□□□□□ -1.07
CSDE1-210ENST00000525878 LIG1P18858 919 aa8.37□□□□□ -1.07
CSDE1-210ENST00000525878 TP53INP2Q8IXH6 220 aa8.37□□□□□ -1.07
CSDE1-210ENST00000525878 RETREG2Q8NC44 543 aa8.37□□□□□ -1.07
CSDE1-210ENST00000525878 KRT82Q9NSB4 513 aa8.37□□□□□ -1.07
CSDE1-210ENST00000525878 DAGLAQ9Y4D2 1042 aa8.37□□□□□ -1.07
CSDE1-210ENST00000525878 ITGB5P18084 799 aa8.36□□□□□ -1.07
CSDE1-210ENST00000525878 KIF4BQ2VIQ3 1234 aa8.36□□□□□ -1.07
CSDE1-210ENST00000525878 WFDC3Q8IUB2 231 aa8.36□□□□□ -1.07
CSDE1-210ENST00000525878 TMC1Q8TDI8 760 aa8.36□□□□□ -1.07
CSDE1-210ENST00000525878 FANCD2OSQ96PS1 177 aa8.36□□□□□ -1.07
CSDE1-210ENST00000525878 LRRC4CQ9HCJ2 640 aa8.36□□□□□ -1.07
CSDE1-210ENST00000525878 GSTP1P09211 210 aaKnown RBP8.35□□□□□ -1.07
CSDE1-210ENST00000525878 YBX3P16989 372 aaKnown RBP eCLIP8.35□□□□□ -1.076e-16■■□□□ 11.8
CSDE1-210ENST00000525878 ZNF157P51786 506 aaPredicted RBP8.35□□□□□ -1.07
CSDE1-210ENST00000525878 ID3Q02535 119 aa8.35□□□□□ -1.07
CSDE1-210ENST00000525878 PDZD3Q86UT5 571 aa8.35□□□□□ -1.07
CSDE1-210ENST00000525878 AGBL5Q8NDL9 886 aa8.35□□□□□ -1.07
CSDE1-210ENST00000525878 CCER1Q8TC90 406 aaPredicted RBP8.35□□□□□ -1.07
CSDE1-210ENST00000525878 SOWAHDA6NJG2 315 aa8.34□□□□□ -1.07
CSDE1-210ENST00000525878 SLFN14P0C7P3 912 aa8.34□□□□□ -1.07
CSDE1-210ENST00000525878 FLCNQ8NFG4 579 aa8.34□□□□□ -1.07
CSDE1-210ENST00000525878 BCL7CQ8WUZ0 217 aaPredicted RBP8.34□□□□□ -1.07
CSDE1-210ENST00000525878 ATXN3LQ9H3M9 355 aa8.34□□□□□ -1.07
CSDE1-210ENST00000525878 DISC1Q9NRI5 854 aa8.34□□□□□ -1.07
CSDE1-210ENST00000525878 PDE4CQ08493 712 aa8.33□□□□□ -1.08
CSDE1-210ENST00000525878 PI16Q6UXB8 463 aa8.33□□□□□ -1.08
CSDE1-210ENST00000525878 DTHD1Q6ZMT9 781 aa8.33□□□□□ -1.08
CSDE1-210ENST00000525878 TMC7Q7Z402 723 aa8.33□□□□□ -1.08
CSDE1-210ENST00000525878 ZC3H12CQ9C0D7 883 aaKnown RBP8.33□□□□□ -1.08
CSDE1-210ENST00000525878 LGR6Q9HBX8 967 aa8.33□□□□□ -1.08
CSDE1-210ENST00000525878 TMEM39AQ9NV64 488 aa8.33□□□□□ -1.08
CSDE1-210ENST00000525878 XRCC5P13010 732 aaKnown RBP8.32□□□□□ -1.08
CSDE1-210ENST00000525878 FCGRTP55899 365 aa8.32□□□□□ -1.08
CSDE1-210ENST00000525878 DSC3Q14574 896 aa8.32□□□□□ -1.08
CSDE1-210ENST00000525878 CYP27C1Q4G0S4 372 aa8.32□□□□□ -1.08
CSDE1-210ENST00000525878 GNEQ9Y223 722 aaKnown RBP8.32□□□□□ -1.08
CSDE1-210ENST00000525878 CDK5R2Q13319 367 aa8.31□□□□□ -1.08
CSDE1-210ENST00000525878 SMYD4Q8IYR2 804 aaPredicted RBP8.31□□□□□ -1.08
CSDE1-210ENST00000525878 BCO2Q9BYV7 579 aa8.31□□□□□ -1.08
CSDE1-210ENST00000525878 SLC5A6Q9Y289 635 aa8.31□□□□□ -1.08
CSDE1-210ENST00000525878 JUNBP17275 347 aaPredicted RBP8.3□□□□□ -1.08
CSDE1-210ENST00000525878 PPP2R3AQ06190 1150 aa8.3□□□□□ -1.08
CSDE1-210ENST00000525878 SPRED2Q7Z698 418 aa8.3□□□□□ -1.08
CSDE1-210ENST00000525878 STK11IPQ8N1F8 1099 aa8.3□□□□□ -1.08
CSDE1-210ENST00000525878 STK35Q8TDR2 534 aa8.3□□□□□ -1.08
CSDE1-210ENST00000525878 PIDD1Q9HB75 910 aa8.3□□□□□ -1.08
CSDE1-210ENST00000525878 NLRP2Q9NX02 1062 aa8.3□□□□□ -1.08
CSDE1-210ENST00000525878 CACNA2D2Q9NY47 1150 aa8.3□□□□□ -1.08
CSDE1-210ENST00000525878 KRTAP4-8A0A0G2JLE6 195 aa8.29□□□□□ -1.08
CSDE1-210ENST00000525878 FAM87AP0C7U9 286 aa8.29□□□□□ -1.08
CSDE1-210ENST00000525878 TTLL4Q14679 1199 aa8.29□□□□□ -1.08
CSDE1-210ENST00000525878 ZC3H12AQ5D1E8 599 aaKnown RBP8.29□□□□□ -1.08
CSDE1-210ENST00000525878 ZNF574Q6ZN55 896 aaPredicted RBP8.29□□□□□ -1.08
CSDE1-210ENST00000525878 MISP3Q96FF7 219 aa8.29□□□□□ -1.08
CSDE1-210ENST00000525878 ASIC4Q96FT7 647 aa8.29□□□□□ -1.08
CSDE1-210ENST00000525878 PPP4R2Q9NY27 417 aa8.29□□□□□ -1.08
CSDE1-210ENST00000525878 GPN3Q9UHW5 284 aaPredicted RBP8.29□□□□□ -1.08
CSDE1-210ENST00000525878 DCTN4Q9UJW0 460 aa8.29□□□□□ -1.08
CSDE1-210ENST00000525878 NEFMP07197 916 aa8.28□□□□□ -1.08
CSDE1-210ENST00000525878 HNRNPUQ00839 825 aaKnown RBP eCLIP8.28□□□□□ -1.08
CSDE1-210ENST00000525878 OGFOD2Q6N063 350 aa8.28□□□□□ -1.08
CSDE1-210ENST00000525878 SULF2Q8IWU5 870 aa8.28□□□□□ -1.08
CSDE1-210ENST00000525878 C3orf58Q8NDZ4 430 aa8.28□□□□□ -1.08
CSDE1-210ENST00000525878 ARID3AQ99856 593 aa8.28□□□□□ -1.08
CSDE1-210ENST00000525878 MKNK2Q9HBH9 465 aa8.28□□□□□ -1.08
CSDE1-210ENST00000525878 U3KQE9 123 aa8.28□□□□□ -1.08
CSDE1-210ENST00000525878 TREHO43280 583 aa8.27□□□□□ -1.09
CSDE1-210ENST00000525878 HCLS1P14317 486 aaPredicted RBP8.27□□□□□ -1.09
CSDE1-210ENST00000525878 ARNTP27540 789 aa8.27□□□□□ -1.09
CSDE1-210ENST00000525878 ZNF252P-AS1Q0IIN9 211 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms