RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 CAPS2Q9BXY5 557 aa7.5□□□□□ -1.21
SDC2-208ENST00000523877 DNAI2Q9GZS0 605 aa7.5□□□□□ -1.21
SDC2-208ENST00000523877 OSBPL2Q9H1P3 480 aa7.5□□□□□ -1.21
SDC2-208ENST00000523877 DNAJC25Q9H1X3 360 aa7.5□□□□□ -1.21
SDC2-208ENST00000523877 VPS33BQ9H267 617 aa7.5□□□□□ -1.21
SDC2-208ENST00000523877 TOMM22Q9NS69 142 aa7.5□□□□□ -1.21
SDC2-208ENST00000523877 PDRG1Q9NUG6 133 aa7.5□□□□□ -1.21
SDC2-208ENST00000523877 UBAP1Q9NZ09 502 aa7.5□□□□□ -1.21
SDC2-208ENST00000523877 ITGB1BP2Q9UKP3 347 aa7.5□□□□□ -1.21
SDC2-208ENST00000523877 PPP1R9AQ9ULJ8 1098 aa7.5□□□□□ -1.21
SDC2-208ENST00000523877 CGNL1Q0VF96 1302 aa7.5□□□□□ -1.21
SDC2-208ENST00000523877 KDRP35968 1356 aa7.49□□□□□ -1.21
SDC2-208ENST00000523877 TMEM88BA6NKF7 163 aa7.49□□□□□ -1.21
SDC2-208ENST00000523877 PRSS47A8MTI9 375 aa7.49□□□□□ -1.21
SDC2-208ENST00000523877 STXBP3O00186 592 aa7.49□□□□□ -1.21
SDC2-208ENST00000523877 KDM1AO60341 852 aa7.49□□□□□ -1.21
SDC2-208ENST00000523877 CLASP2O75122 1294 aaKnown RBP7.49□□□□□ -1.21
SDC2-208ENST00000523877 CYP11B2P19099 503 aa7.49□□□□□ -1.21
SDC2-208ENST00000523877 COPAP53621 1224 aa7.49□□□□□ -1.21
SDC2-208ENST00000523877 TPD52P55327 224 aaPredicted RBP7.49□□□□□ -1.21
SDC2-208ENST00000523877 AMPD3Q01432 767 aa7.49□□□□□ -1.21
SDC2-208ENST00000523877 RBL2Q08999 1139 aa7.49□□□□□ -1.21
SDC2-208ENST00000523877 DDX10Q13206 875 aaKnown RBP7.49□□□□□ -1.21
SDC2-208ENST00000523877 KIF22Q14807 665 aa7.49□□□□□ -1.21
SDC2-208ENST00000523877 CLPPQ16740 277 aaPredicted RBP7.49□□□□□ -1.21
SDC2-208ENST00000523877 GRAMD1BQ3KR37 738 aa7.49□□□□□ -1.21
SDC2-208ENST00000523877 WDR45BQ5MNZ6 344 aa7.49□□□□□ -1.21
SDC2-208ENST00000523877 OLFML1Q6UWY5 402 aa7.49□□□□□ -1.21
SDC2-208ENST00000523877 BEND5Q7L4P6 421 aa7.49□□□□□ -1.21
SDC2-208ENST00000523877 SRLQ86TD4 932 aa7.49□□□□□ -1.21
SDC2-208ENST00000523877 TMEM110Q86TL2 294 aa7.49□□□□□ -1.21
SDC2-208ENST00000523877 RSPH3Q86UC2 560 aa7.49□□□□□ -1.21
SDC2-208ENST00000523877 SAPCD2Q86UD0 394 aa7.49□□□□□ -1.21
SDC2-208ENST00000523877 IFNL3Q8IZI9 196 aa7.49□□□□□ -1.21
SDC2-208ENST00000523877 ATP11CQ8NB49 1132 aa7.49□□□□□ -1.21
SDC2-208ENST00000523877 BICD2Q8TD16 824 aa7.49□□□□□ -1.21
SDC2-208ENST00000523877 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.49□□□□□ -1.21
SDC2-208ENST00000523877 LRRC45Q96CN5 670 aa7.49□□□□□ -1.21
SDC2-208ENST00000523877 THOC1Q96FV9 657 aaKnown RBP7.49□□□□□ -1.21
SDC2-208ENST00000523877 GPR101Q96P66 508 aaPredicted RBP7.49□□□□□ -1.21
SDC2-208ENST00000523877 TINF2Q9BSI4 451 aa7.49□□□□□ -1.21
SDC2-208ENST00000523877 CCDC68Q9H2F9 335 aa7.49□□□□□ -1.21
SDC2-208ENST00000523877 VCX3BQ9H321 246 aa7.49□□□□□ -1.21
SDC2-208ENST00000523877 NRDE2Q9H7Z3 1164 aa7.49□□□□□ -1.21
SDC2-208ENST00000523877 SH3GLB2Q9NR46 395 aa7.49□□□□□ -1.21
SDC2-208ENST00000523877 DISC1Q9NRI5 854 aa7.49□□□□□ -1.21
SDC2-208ENST00000523877 VPS9D1Q9Y2B5 631 aa7.49□□□□□ -1.21
SDC2-208ENST00000523877 NOSIPQ9Y314 301 aaKnown RBP7.49□□□□□ -1.21
SDC2-208ENST00000523877 SNX5Q9Y5X3 404 aa7.49□□□□□ -1.21
SDC2-208ENST00000523877 C2orf81A6NN90 581 aa7.48□□□□□ -1.21
SDC2-208ENST00000523877 SCAMP3O14828 347 aaKnown RBP7.48□□□□□ -1.21
SDC2-208ENST00000523877 B3GALNT1O75752 331 aa7.48□□□□□ -1.21
SDC2-208ENST00000523877 FGFR1OPO95684 399 aaKnown RBP7.48□□□□□ -1.21
SDC2-208ENST00000523877 HSPA1AP0DMV8 641 aaKnown RBP7.48□□□□□ -1.21
SDC2-208ENST00000523877 HSPA1BP0DMV9 641 aaKnown RBP7.48□□□□□ -1.21
SDC2-208ENST00000523877 NCAM1P13591 858 aa7.48□□□□□ -1.21
SDC2-208ENST00000523877 KCNA6P17658 529 aa7.48□□□□□ -1.21
SDC2-208ENST00000523877 RASA2Q15283 850 aa7.48□□□□□ -1.21
SDC2-208ENST00000523877 SF3B3Q15393 1217 aaKnown RBP7.48□□□□□ -1.21
SDC2-208ENST00000523877 RABL6Q3YEC7 729 aaPredicted RBP7.48□□□□□ -1.21
SDC2-208ENST00000523877 HYIQ5T013 277 aa7.48□□□□□ -1.21
SDC2-208ENST00000523877 AKNAD1Q5T1N1 836 aa7.48□□□□□ -1.21
SDC2-208ENST00000523877 C10orf76Q5T2E6 689 aa7.48□□□□□ -1.21
SDC2-208ENST00000523877 ERCC6L2Q5T890 1561 aa7.48□□□□□ -1.21
SDC2-208ENST00000523877 DCLK2Q8N568 766 aa7.48□□□□□ -1.21
SDC2-208ENST00000523877 ANKK1Q8NFD2 765 aa7.48□□□□□ -1.21
SDC2-208ENST00000523877 KIAA1524Q8TCG1 905 aa7.48□□□□□ -1.21
SDC2-208ENST00000523877 ACMSDQ8TDX5 336 aa7.48□□□□□ -1.21
SDC2-208ENST00000523877 CHMP7Q8WUX9 453 aaPredicted RBP7.48□□□□□ -1.21
SDC2-208ENST00000523877 ZNF75CPQ92670 426 aaPredicted RBP7.48□□□□□ -1.21
SDC2-208ENST00000523877 PGBD4Q96DM1 585 aa7.48□□□□□ -1.21
SDC2-208ENST00000523877 RBM33Q96EV2 1170 aaKnown RBP7.48□□□□□ -1.21
SDC2-208ENST00000523877 SELENOOQ9BVL4 669 aa7.48□□□□□ -1.21
SDC2-208ENST00000523877 CHST12Q9NRB3 414 aa7.48□□□□□ -1.21
SDC2-208ENST00000523877 TUBA8Q9NY65 449 aaPredicted RBP7.48□□□□□ -1.21
SDC2-208ENST00000523877 PSD3Q9NYI0 1048 aa7.48□□□□□ -1.21
SDC2-208ENST00000523877 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.48□□□□□ -1.21
SDC2-208ENST00000523877 MUSKO15146 869 aa7.47□□□□□ -1.21
SDC2-208ENST00000523877 NEMFO60524 1076 aa7.47□□□□□ -1.21
SDC2-208ENST00000523877 REC8O95072 547 aa7.47□□□□□ -1.21
SDC2-208ENST00000523877 MCM5P33992 734 aa7.47□□□□□ -1.21
SDC2-208ENST00000523877 HSPA1LP34931 641 aa7.47□□□□□ -1.21
SDC2-208ENST00000523877 CA8P35219 290 aa7.47□□□□□ -1.21
SDC2-208ENST00000523877 TNNI2P48788 182 aa7.47□□□□□ -1.21
SDC2-208ENST00000523877 GPSM2P81274 684 aa7.47□□□□□ -1.21
SDC2-208ENST00000523877 PDE1CQ14123 709 aaPredicted RBP7.47□□□□□ -1.21
SDC2-208ENST00000523877 MFSD10Q14728 455 aa7.47□□□□□ -1.21
SDC2-208ENST00000523877 TNIP1Q15025 636 aa7.47□□□□□ -1.21
SDC2-208ENST00000523877 RCN1Q15293 331 aa7.47□□□□□ -1.21
SDC2-208ENST00000523877 NBPF8Q3BBV2 869 aa7.47□□□□□ -1.21
SDC2-208ENST00000523877 RASGRP2Q7LDG7 609 aa7.47□□□□□ -1.21
SDC2-208ENST00000523877 CCDC186Q7Z3E2 898 aa7.47□□□□□ -1.21
SDC2-208ENST00000523877 GBP7Q8N8V2 638 aaPredicted RBP7.47□□□□□ -1.21
SDC2-208ENST00000523877 GIMAP8Q8ND71 665 aaPredicted RBP7.47□□□□□ -1.21
SDC2-208ENST00000523877 SKA1Q96BD8 255 aa7.47□□□□□ -1.21
SDC2-208ENST00000523877 EPSTI1Q96J88 318 aa7.47□□□□□ -1.21
SDC2-208ENST00000523877 PRIMPOLQ96LW4 560 aa7.47□□□□□ -1.21
SDC2-208ENST00000523877 SERINC2Q96SA4 455 aa7.47□□□□□ -1.21
SDC2-208ENST00000523877 CCDC113Q9H0I3 377 aa7.47□□□□□ -1.21
SDC2-208ENST00000523877 ZNF700Q9H0M5 742 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms