RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 SUGCTQ9HAC7 445 aa9.91□□□□□ -0.82
CPNE3-206ENST00000523469 CYP4F12Q9HCS2 524 aa9.91□□□□□ -0.82
CPNE3-206ENST00000523469 LIG3P49916 1009 aa9.9□□□□□ -0.82
CPNE3-206ENST00000523469 MAP3K11Q16584 847 aa9.9□□□□□ -0.82
CPNE3-206ENST00000523469 MAP1SQ66K74 1059 aaPredicted RBP9.9□□□□□ -0.82
CPNE3-206ENST00000523469 FDX2Q6P4F2 183 aa9.9□□□□□ -0.82
CPNE3-206ENST00000523469 METTL5Q9NRN9 209 aaKnown RBP9.9□□□□□ -0.82
CPNE3-206ENST00000523469 SYNGAP1Q96PV0 1343 aa9.89□□□□□ -0.83
CPNE3-206ENST00000523469 TRIM37O94972 964 aa9.89□□□□□ -0.83
CPNE3-206ENST00000523469 RASIP1Q5U651 963 aa9.89□□□□□ -0.83
CPNE3-206ENST00000523469 AGMOQ6ZNB7 445 aa9.89□□□□□ -0.83
CPNE3-206ENST00000523469 DZIP1LQ8IYY4 767 aaKnown RBP9.89□□□□□ -0.83
CPNE3-206ENST00000523469 GRIN3AQ8TCU5 1115 aa9.89□□□□□ -0.83
CPNE3-206ENST00000523469 RSRP1Q9BUV0 290 aa9.89□□□□□ -0.83
CPNE3-206ENST00000523469 RAD18Q9NS91 495 aa9.89□□□□□ -0.83
CPNE3-206ENST00000523469 SCAMP3O14828 347 aaKnown RBP9.88□□□□□ -0.83
CPNE3-206ENST00000523469 AOC2O75106 756 aa9.88□□□□□ -0.83
CPNE3-206ENST00000523469 ZNF76P36508 570 aa9.88□□□□□ -0.83
CPNE3-206ENST00000523469 PWP1Q13610 501 aa9.88□□□□□ -0.83
CPNE3-206ENST00000523469 HS2ST1Q7LGA3 356 aa9.88□□□□□ -0.83
CPNE3-206ENST00000523469 CACNA2D2Q9NY47 1150 aa9.88□□□□□ -0.83
CPNE3-206ENST00000523469 ZNF862O60290 1169 aa9.87□□□□□ -0.83
CPNE3-206ENST00000523469 LIG1P18858 919 aa9.87□□□□□ -0.83
CPNE3-206ENST00000523469 LMNB1P20700 586 aa9.87□□□□□ -0.83
CPNE3-206ENST00000523469 KIF4BQ2VIQ3 1234 aa9.87□□□□□ -0.83
CPNE3-206ENST00000523469 ERMP1Q7Z2K6 904 aa9.87□□□□□ -0.83
CPNE3-206ENST00000523469 RELL1Q8IUW5 271 aa9.87□□□□□ -0.83
CPNE3-206ENST00000523469 C12orf50Q8NA57 414 aaPredicted RBP9.87□□□□□ -0.83
CPNE3-206ENST00000523469 MEGF10Q96KG7 1140 aa9.87□□□□□ -0.83
CPNE3-206ENST00000523469 WDR18Q9BV38 432 aa9.87□□□□□ -0.83
CPNE3-206ENST00000523469 SSBP4Q9BWG4 385 aaPredicted RBP9.87□□□□□ -0.83
CPNE3-206ENST00000523469 SART1O43290 800 aaKnown RBP9.86□□□□□ -0.83
CPNE3-206ENST00000523469 TIAF1O95411 115 aa9.86□□□□□ -0.83
CPNE3-206ENST00000523469 IGHA1P01876 353 aa9.86□□□□□ -0.83
CPNE3-206ENST00000523469 SLFN14P0C7P3 912 aa9.86□□□□□ -0.83
CPNE3-206ENST00000523469 FANCCQ00597 558 aa9.86□□□□□ -0.83
CPNE3-206ENST00000523469 UVSSAQ2YD98 709 aa9.86□□□□□ -0.83
CPNE3-206ENST00000523469 GPBAR1Q8TDU6 330 aa9.86□□□□□ -0.83
CPNE3-206ENST00000523469 ACSBG1Q96GR2 724 aa9.86□□□□□ -0.83
CPNE3-206ENST00000523469 UBL7Q96S82 380 aaPredicted RBP9.86□□□□□ -0.83
CPNE3-206ENST00000523469 GGT7Q9UJ14 662 aa9.86□□□□□ -0.83
CPNE3-206ENST00000523469 MSTNO14793 375 aa9.85□□□□□ -0.83
CPNE3-206ENST00000523469 SOX4Q06945 474 aaPredicted RBP9.85□□□□□ -0.83
CPNE3-206ENST00000523469 AKAP4Q5JQC9 854 aa9.85□□□□□ -0.83
CPNE3-206ENST00000523469 GPAT2Q6NUI2 795 aa9.85□□□□□ -0.83
CPNE3-206ENST00000523469 PHC3Q8NDX5 983 aa9.85□□□□□ -0.83
CPNE3-206ENST00000523469 RNF34Q969K3 372 aa9.85□□□□□ -0.83
CPNE3-206ENST00000523469 WDR89Q96FK6 387 aaPredicted RBP9.85□□□□□ -0.83
CPNE3-206ENST00000523469 FAM46AQ96IP4 442 aaKnown RBP9.85□□□□□ -0.83
CPNE3-206ENST00000523469 TMEM74Q96NL1 305 aa9.85□□□□□ -0.83
CPNE3-206ENST00000523469 SPOCK3Q9BQ16 436 aa9.85□□□□□ -0.83
CPNE3-206ENST00000523469 E9PSI1 815 aa9.84□□□□□ -0.83
CPNE3-206ENST00000523469 PROCP04070 461 aa9.84□□□□□ -0.83
CPNE3-206ENST00000523469 ADH5P11766 374 aa9.84□□□□□ -0.83
CPNE3-206ENST00000523469 GBP2P32456 591 aaPredicted RBP9.84□□□□□ -0.83
CPNE3-206ENST00000523469 PREPP48147 710 aa9.84□□□□□ -0.83
CPNE3-206ENST00000523469 MPRIPQ6WCQ1 1025 aa9.84□□□□□ -0.83
CPNE3-206ENST00000523469 TLR6Q9Y2C9 796 aa9.84□□□□□ -0.83
CPNE3-206ENST00000523469 DRD2P14416 443 aa9.83□□□□□ -0.84
CPNE3-206ENST00000523469 TFE3P19532 575 aaPredicted RBP9.83□□□□□ -0.84
CPNE3-206ENST00000523469 KBTBD4Q9NVX7 518 aa9.83□□□□□ -0.84
CPNE3-206ENST00000523469 ID3Q02535 119 aa9.82□□□□□ -0.84
CPNE3-206ENST00000523469 LMNB2Q03252 620 aa9.82□□□□□ -0.84
CPNE3-206ENST00000523469 TRIM42Q8IWZ5 723 aa9.82□□□□□ -0.84
CPNE3-206ENST00000523469 TP53INP1Q96A56 240 aa9.82□□□□□ -0.84
CPNE3-206ENST00000523469 RHOVQ96L33 236 aa9.82□□□□□ -0.84
CPNE3-206ENST00000523469 MIR1-1HGQ9H1L0 117 aa9.82□□□□□ -0.84
CPNE3-206ENST00000523469 COPRSQ9NQ92 184 aa9.82□□□□□ -0.84
CPNE3-206ENST00000523469 PCDHB5Q9Y5E4 795 aa9.82□□□□□ -0.84
CPNE3-206ENST00000523469 PCDHGC5Q9Y5F6 944 aa9.82□□□□□ -0.84
CPNE3-206ENST00000523469 F6X3S4 739 aa9.81□□□□□ -0.84
CPNE3-206ENST00000523469 GAS2O43903 313 aaKnown RBP9.81□□□□□ -0.84
CPNE3-206ENST00000523469 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.81□□□□□ -0.84
CPNE3-206ENST00000523469 CCDC84Q86UT8 332 aaPredicted RBP9.81□□□□□ -0.84
CPNE3-206ENST00000523469 C2CD4AQ8NCU7 369 aaPredicted RBP9.81□□□□□ -0.84
CPNE3-206ENST00000523469 UTP4Q969X6 686 aaKnown RBP9.81□□□□□ -0.84
CPNE3-206ENST00000523469 GAL3ST3Q96A11 431 aa9.81□□□□□ -0.84
CPNE3-206ENST00000523469 MYRFLQ96LU7 910 aa9.81□□□□□ -0.84
CPNE3-206ENST00000523469 TPSG1Q9NRR2 321 aa9.81□□□□□ -0.84
CPNE3-206ENST00000523469 PPP1R9AQ9ULJ8 1098 aa9.81□□□□□ -0.84
CPNE3-206ENST00000523469 AP4E1Q9UPM8 1137 aa9.81□□□□□ -0.84
CPNE3-206ENST00000523469 HIF3AQ9Y2N7 669 aa9.81□□□□□ -0.84
CPNE3-206ENST00000523469 MINDY4BA8MYZ0 360 aa9.8□□□□□ -0.84
CPNE3-206ENST00000523469 TMPRSS2O15393 492 aa9.8□□□□□ -0.84
CPNE3-206ENST00000523469 PTPN11Q06124 597 aaPredicted RBP9.8□□□□□ -0.84
CPNE3-206ENST00000523469 CAMK2GQ13555 558 aaPredicted RBP9.8□□□□□ -0.84
CPNE3-206ENST00000523469 SEPT6Q14141 434 aa9.8□□□□□ -0.84
CPNE3-206ENST00000523469 ZC3H12AQ5D1E8 599 aaKnown RBP9.8□□□□□ -0.84
CPNE3-206ENST00000523469 DIEXFQ68CQ4 756 aaKnown RBP9.8□□□□□ -0.84
CPNE3-206ENST00000523469 ARMC10Q8N2F6 343 aa9.8□□□□□ -0.84
CPNE3-206ENST00000523469 CRIM1Q9NZV1 1036 aa9.8□□□□□ -0.84
CPNE3-206ENST00000523469 PCDHA4Q9UN74 947 aa9.8□□□□□ -0.84
CPNE3-206ENST00000523469 PF4P02776 101 aa9.79□□□□□ -0.84
CPNE3-206ENST00000523469 DOC2BQ14184 412 aa9.79□□□□□ -0.84
CPNE3-206ENST00000523469 DYMQ7RTS9 669 aa9.79□□□□□ -0.84
CPNE3-206ENST00000523469 GSX1Q9H4S2 264 aaPredicted RBP9.79□□□□□ -0.84
CPNE3-206ENST00000523469 ACTL7BQ9Y614 415 aa9.79□□□□□ -0.84
CPNE3-206ENST00000523469 DHX15O43143 795 aaKnown RBP9.78□□□□□ -0.84
CPNE3-206ENST00000523469 USP11P51784 963 aa9.78□□□□□ -0.84
CPNE3-206ENST00000523469 ERVK-24P63145 666 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms