RNA–Protein interactions for RNA: ENST00000523091.5

CHMP7-210, Transcript of charged multivesicular body protein 7, humanhuman

TSL 1 (best)

Gene CHMP7, Length 2,672 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-210ENST00000523091 WDR19Q8NEZ3 1342 aa17.25■□□□□ 0.35
CHMP7-210ENST00000523091 UBE2Q2LH0YL09 131 aa17.25■□□□□ 0.35
CHMP7-210ENST00000523091 METAP2P50579 478 aaKnown RBP eCLIP17.25■□□□□ 0.35
CHMP7-210ENST00000523091 FSIP1Q8NA03 581 aa17.25■□□□□ 0.35
CHMP7-210ENST00000523091 LINC00116Q8NCU8 138 aa17.25■□□□□ 0.35
CHMP7-210ENST00000523091 IGDCC4Q8TDY8 1250 aa17.25■□□□□ 0.35
CHMP7-210ENST00000523091 CHMP4CQ96CF2 233 aa17.25■□□□□ 0.35
CHMP7-210ENST00000523091 GSG1L2A8MUP6 293 aa17.25■□□□□ 0.35
CHMP7-210ENST00000523091 PHLPP1O60346 1717 aa17.25■□□□□ 0.35
CHMP7-210ENST00000523091 A0A1B0GVL5 298 aa17.24■□□□□ 0.35
CHMP7-210ENST00000523091 ZSCAN20P17040 1043 aaPredicted RBP17.24■□□□□ 0.35
CHMP7-210ENST00000523091 ZNF165P49910 485 aa17.24■□□□□ 0.35
CHMP7-210ENST00000523091 KIAA2012Q0VF49 1180 aa17.24■□□□□ 0.35
CHMP7-210ENST00000523091 APOA5Q6Q788 366 aa17.24■□□□□ 0.35
CHMP7-210ENST00000523091 ENGASEQ8NFI3 743 aa17.24■□□□□ 0.35
CHMP7-210ENST00000523091 ZSWIM5Q9P217 1185 aa17.24■□□□□ 0.35
CHMP7-210ENST00000523091 ZMYM6O95789 1325 aa17.24■□□□□ 0.35
CHMP7-210ENST00000523091 GYG1P46976 350 aa17.24■□□□□ 0.35
CHMP7-210ENST00000523091 NFXL1Q6ZNB6 911 aa17.24■□□□□ 0.35
CHMP7-210ENST00000523091 CCDC73Q6ZRK6 1079 aa17.24■□□□□ 0.35
CHMP7-210ENST00000523091 LY9Q9HBG7 655 aa17.24■□□□□ 0.35
CHMP7-210ENST00000523091 RTEL1Q9NZ71 1219 aa17.24■□□□□ 0.35
CHMP7-210ENST00000523091 RRP12Q5JTH9 1297 aaKnown RBP17.24■□□□□ 0.35
CHMP7-210ENST00000523091 ATL3Q6DD88 541 aa17.24■□□□□ 0.35
CHMP7-210ENST00000523091 LINC00301Q8NCQ3 95 aa17.24■□□□□ 0.35
CHMP7-210ENST00000523091 ZKSCAN3Q9BRR0 538 aa17.24■□□□□ 0.35
CHMP7-210ENST00000523091 LRP2BPQ9P2M1 347 aa17.24■□□□□ 0.35
CHMP7-210ENST00000523091 ARAP2Q8WZ64 1704 aa17.23■□□□□ 0.35
CHMP7-210ENST00000523091 TAF1P21675 1872 aa17.23■□□□□ 0.35
CHMP7-210ENST00000523091 TMEM67Q5HYA8 995 aa17.23■□□□□ 0.35
CHMP7-210ENST00000523091 C11orf57Q6ZUT1 292 aaPredicted RBP17.23■□□□□ 0.35
CHMP7-210ENST00000523091 ADGRA1Q86SQ6 560 aa17.23■□□□□ 0.35
CHMP7-210ENST00000523091 SLC4A4Q9Y6R1 1079 aa17.23■□□□□ 0.35
CHMP7-210ENST00000523091 KIF23Q02241 960 aaPredicted RBP17.23■□□□□ 0.35
CHMP7-210ENST00000523091 ALX1Q15699 326 aa17.23■□□□□ 0.35
CHMP7-210ENST00000523091 MYSM1Q5VVJ2 828 aa17.23■□□□□ 0.35
CHMP7-210ENST00000523091 BARGINQ6ZT62 677 aa17.23■□□□□ 0.35
CHMP7-210ENST00000523091 FBXW7Q969H0 707 aa17.23■□□□□ 0.35
CHMP7-210ENST00000523091 ALG1Q9BT22 464 aa17.23■□□□□ 0.35
CHMP7-210ENST00000523091 KCNF1Q9H3M0 494 aa17.23■□□□□ 0.35
CHMP7-210ENST00000523091 ABCF2Q9UG63 623 aa17.23■□□□□ 0.35
CHMP7-210ENST00000523091 C4AP0C0L4 1744 aa17.22■□□□□ 0.35
CHMP7-210ENST00000523091 C4BP0C0L5 1744 aa17.22■□□□□ 0.35
CHMP7-210ENST00000523091 SMIM22K7EJ46 135 aa17.22■□□□□ 0.35
CHMP7-210ENST00000523091 FAM160A1Q05DH4 1040 aa17.22■□□□□ 0.35
CHMP7-210ENST00000523091 STK38Q15208 465 aa17.22■□□□□ 0.35
CHMP7-210ENST00000523091 TOMM22Q9NS69 142 aa17.22■□□□□ 0.35
CHMP7-210ENST00000523091 FAM217BQ9NTX9 383 aaPredicted RBP17.22■□□□□ 0.35
CHMP7-210ENST00000523091 KINO60870 393 aaKnown RBP17.22■□□□□ 0.35
CHMP7-210ENST00000523091 TDO2P48775 406 aa17.22■□□□□ 0.35
CHMP7-210ENST00000523091 NDUFA8P51970 172 aa17.22■□□□□ 0.35
CHMP7-210ENST00000523091 SF3A1Q15459 793 aaKnown RBP17.22■□□□□ 0.35
CHMP7-210ENST00000523091 IFIT3O14879 490 aaKnown RBP17.21■□□□□ 0.35
CHMP7-210ENST00000523091 ZBTB43O43298 467 aa17.21■□□□□ 0.35
CHMP7-210ENST00000523091 CCDC24Q8N4L8 307 aa17.21■□□□□ 0.35
CHMP7-210ENST00000523091 ZNF652Q9Y2D9 606 aa17.21■□□□□ 0.35
CHMP7-210ENST00000523091 RANBP6O60518 1105 aaKnown RBP17.21■□□□□ 0.35
CHMP7-210ENST00000523091 AKNAD1Q5T1N1 836 aa17.21■□□□□ 0.35
CHMP7-210ENST00000523091 SDR42E1Q8WUS8 393 aa17.21■□□□□ 0.35
CHMP7-210ENST00000523091 SMARCC1Q92922 1105 aaPredicted RBP17.21■□□□□ 0.35
CHMP7-210ENST00000523091 TMEM87BQ96K49 555 aa17.21■□□□□ 0.35
CHMP7-210ENST00000523091 GOLGA8AA7E2F4 631 aa17.2■□□□□ 0.34
CHMP7-210ENST00000523091 NTRK3Q16288 839 aa17.2■□□□□ 0.34
CHMP7-210ENST00000523091 ADALQ6DHV7 355 aa17.2■□□□□ 0.34
CHMP7-210ENST00000523091 FMR1NBQ8N0W7 255 aaPredicted RBP17.2■□□□□ 0.34
CHMP7-210ENST00000523091 TDRD7Q8NHU6 1098 aaKnown RBP17.2■□□□□ 0.34
CHMP7-210ENST00000523091 MRPS27Q92552 414 aaKnown RBP17.2■□□□□ 0.34
CHMP7-210ENST00000523091 RREB1Q92766 1687 aa17.2■□□□□ 0.34
CHMP7-210ENST00000523091 DOCK2Q92608 1830 aa17.2■□□□□ 0.34
CHMP7-210ENST00000523091 RTL9Q8NET4 1388 aa17.2■□□□□ 0.34
CHMP7-210ENST00000523091 SPTLC2O15270 562 aa17.2■□□□□ 0.34
CHMP7-210ENST00000523091 CYP7A1P22680 504 aa17.2■□□□□ 0.34
CHMP7-210ENST00000523091 MFSD6Q6ZSS7 791 aa17.2■□□□□ 0.34
CHMP7-210ENST00000523091 ANKRD18AQ8IVF6 992 aa17.2■□□□□ 0.34
CHMP7-210ENST00000523091 PIBF1Q8WXW3 757 aa17.2■□□□□ 0.34
CHMP7-210ENST00000523091 CDC5LQ99459 802 aaKnown RBP17.2■□□□□ 0.34
CHMP7-210ENST00000523091 TRIM5Q9C035 493 aa17.2■□□□□ 0.34
CHMP7-210ENST00000523091 NRBP1Q9UHY1 535 aa17.2■□□□□ 0.34
CHMP7-210ENST00000523091 PYCARDQ9ULZ3 195 aa17.2■□□□□ 0.34
CHMP7-210ENST00000523091 LTBP4Q8N2S1 1624 aa17.2■□□□□ 0.34
CHMP7-210ENST00000523091 MARCKSP29966 332 aaPredicted RBP17.19■□□□□ 0.34
CHMP7-210ENST00000523091 NOLC1Q14978 699 aaKnown RBP eCLIP17.19■□□□□ 0.34
CHMP7-210ENST00000523091 FAM182BQ5T319 152 aa17.19■□□□□ 0.34
CHMP7-210ENST00000523091 TBC1D9BQ66K14 1250 aa17.19■□□□□ 0.34
CHMP7-210ENST00000523091 KRT40Q6A162 431 aa17.19■□□□□ 0.34
CHMP7-210ENST00000523091 SYNE3Q6ZMZ3 975 aa17.19■□□□□ 0.34
CHMP7-210ENST00000523091 BRAPQ7Z569 592 aa17.19■□□□□ 0.34
CHMP7-210ENST00000523091 CELF1Q92879 486 aaKnown RBP17.19■□□□□ 0.34
CHMP7-210ENST00000523091 C8orf37Q96NL8 207 aa17.19■□□□□ 0.34
CHMP7-210ENST00000523091 POLR3EQ9NVU0 708 aa17.19■□□□□ 0.34
CHMP7-210ENST00000523091 BCL9LQ86UU0 1499 aa17.19■□□□□ 0.34
CHMP7-210ENST00000523091 PTGS1P23219 599 aa17.19■□□□□ 0.34
CHMP7-210ENST00000523091 IQCB1Q15051 598 aa17.19■□□□□ 0.34
CHMP7-210ENST00000523091 SGMS1Q86VZ5 419 aa17.19■□□□□ 0.34
CHMP7-210ENST00000523091 VPS37DQ86XT2 251 aa17.19■□□□□ 0.34
CHMP7-210ENST00000523091 SLC12A7Q9Y666 1083 aa17.19■□□□□ 0.34
CHMP7-210ENST00000523091 GTF2E1P29083 439 aaPredicted RBP17.18■□□□□ 0.34
CHMP7-210ENST00000523091 IARSP41252 1262 aaKnown RBP17.18■□□□□ 0.34
CHMP7-210ENST00000523091 ANO1Q5XXA6 986 aa17.18■□□□□ 0.34
CHMP7-210ENST00000523091 CMTR1Q8N1G2 835 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms