RNA–Protein interactions for RNA: ENST00000521693.1

LAMA4-217, Transcript of laminin subunit alpha 4, humanhuman

TSL 2

Gene LAMA4, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-217ENST00000521693 PDE3AQ14432 1141 aa7.47□□□□□ -1.21
LAMA4-217ENST00000521693 CYP27C1Q4G0S4 372 aa7.47□□□□□ -1.21
LAMA4-217ENST00000521693 LGR6Q9HBX8 967 aa7.47□□□□□ -1.21
LAMA4-217ENST00000521693 AOC2O75106 756 aa7.46□□□□□ -1.22
LAMA4-217ENST00000521693 ZNF792Q3KQV3 632 aa7.46□□□□□ -1.22
LAMA4-217ENST00000521693 ZNF574Q6ZN55 896 aaPredicted RBP7.46□□□□□ -1.22
LAMA4-217ENST00000521693 ANO2Q9NQ90 1003 aa7.46□□□□□ -1.22
LAMA4-217ENST00000521693 ZNF211Q13398 564 aaPredicted RBP7.45□□□□□ -1.22
LAMA4-217ENST00000521693 MISP3Q96FF7 219 aa7.45□□□□□ -1.22
LAMA4-217ENST00000521693 WDR18Q9BV38 432 aa7.45□□□□□ -1.22
LAMA4-217ENST00000521693 ZNF576Q9H609 170 aa7.45□□□□□ -1.22
LAMA4-217ENST00000521693 SYNGAP1Q96PV0 1343 aa7.45□□□□□ -1.22
LAMA4-217ENST00000521693 NEFLP07196 543 aa7.44□□□□□ -1.22
LAMA4-217ENST00000521693 KIAA0319Q5VV43 1072 aa7.44□□□□□ -1.22
LAMA4-217ENST00000521693 SPRED2Q7Z698 418 aa7.44□□□□□ -1.22
LAMA4-217ENST00000521693 EHD4Q9H223 541 aa7.44□□□□□ -1.22
LAMA4-217ENST00000521693 ITPKAP23677 461 aa7.43□□□□□ -1.22
LAMA4-217ENST00000521693 BNIP3Q12983 259 aa7.43□□□□□ -1.22
LAMA4-217ENST00000521693 AP3B2Q13367 1082 aa7.43□□□□□ -1.22
LAMA4-217ENST00000521693 ZNF648Q5T619 568 aaPredicted RBP7.43□□□□□ -1.22
LAMA4-217ENST00000521693 NETO1Q8TDF5 533 aa7.43□□□□□ -1.22
LAMA4-217ENST00000521693 BRPF3Q9ULD4 1205 aa7.43□□□□□ -1.22
LAMA4-217ENST00000521693 PPP1R9AQ9ULJ8 1098 aa7.43□□□□□ -1.22
LAMA4-217ENST00000521693 PPP1R15AO75807 674 aaPredicted RBP7.42□□□□□ -1.22
LAMA4-217ENST00000521693 USPL1Q5W0Q7 1092 aa7.42□□□□□ -1.22
LAMA4-217ENST00000521693 PHLDB3Q6NSJ2 640 aa7.42□□□□□ -1.22
LAMA4-217ENST00000521693 WFDC3Q8IUB2 231 aa7.42□□□□□ -1.22
LAMA4-217ENST00000521693 PIDD1Q9HB75 910 aa7.42□□□□□ -1.22
LAMA4-217ENST00000521693 FAM87AP0C7U9 286 aa7.41□□□□□ -1.22
LAMA4-217ENST00000521693 CDK5R2Q13319 367 aa7.41□□□□□ -1.22
LAMA4-217ENST00000521693 ATG4DQ86TL0 474 aaPredicted RBP7.41□□□□□ -1.22
LAMA4-217ENST00000521693 PLD6Q8N2A8 252 aaKnown RBP7.41□□□□□ -1.22
LAMA4-217ENST00000521693 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.41□□□□□ -1.22
LAMA4-217ENST00000521693 TMPRSS2O15393 492 aa7.4□□□□□ -1.22
LAMA4-217ENST00000521693 SLFN14P0C7P3 912 aa7.4□□□□□ -1.22
LAMA4-217ENST00000521693 CD8BP10966 210 aa7.4□□□□□ -1.22
LAMA4-217ENST00000521693 LIG1P18858 919 aa7.4□□□□□ -1.22
LAMA4-217ENST00000521693 FUT4P22083 530 aa7.4□□□□□ -1.22
LAMA4-217ENST00000521693 PTPN12Q05209 780 aaKnown RBP7.4□□□□□ -1.22
LAMA4-217ENST00000521693 FAM181AQ8N9Y4 354 aa7.4□□□□□ -1.22
LAMA4-217ENST00000521693 RETREG2Q8NC44 543 aa7.4□□□□□ -1.22
LAMA4-217ENST00000521693 ATXN3LQ9H3M9 355 aa7.4□□□□□ -1.22
LAMA4-217ENST00000521693 RC3H2Q9HBD1 1191 aaKnown RBP7.4□□□□□ -1.22
LAMA4-217ENST00000521693 NPHS2Q9NP85 383 aa7.4□□□□□ -1.22
LAMA4-217ENST00000521693 CRIM1Q9NZV1 1036 aa7.4□□□□□ -1.22
LAMA4-217ENST00000521693 CARMIL2Q6F5E8 1435 aa7.4□□□□□ -1.22
LAMA4-217ENST00000521693 CPNE3O75131 537 aaKnown RBP7.39□□□□□ -1.23
LAMA4-217ENST00000521693 FARP2O94887 1054 aaPredicted RBP7.39□□□□□ -1.23
LAMA4-217ENST00000521693 HNRNPUQ00839 825 aaKnown RBP eCLIP7.39□□□□□ -1.23
LAMA4-217ENST00000521693 ZNF124Q15973 351 aa7.39□□□□□ -1.23
LAMA4-217ENST00000521693 FANCD2OSQ96PS1 177 aa7.39□□□□□ -1.23
LAMA4-217ENST00000521693 TRAIPQ9BWF2 469 aa7.39□□□□□ -1.23
LAMA4-217ENST00000521693 VAV3Q9UKW4 847 aa7.39□□□□□ -1.23
LAMA4-217ENST00000521693 ICMTO60725 284 aa7.38□□□□□ -1.23
LAMA4-217ENST00000521693 ID3Q02535 119 aa7.38□□□□□ -1.23
LAMA4-217ENST00000521693 RPS26P11Q5JNZ5 115 aaPredicted RBP7.38□□□□□ -1.23
LAMA4-217ENST00000521693 ARHGAP27Q6ZUM4 889 aa7.38□□□□□ -1.23
LAMA4-217ENST00000521693 SMYD4Q8IYR2 804 aaPredicted RBP7.38□□□□□ -1.23
LAMA4-217ENST00000521693 GLIS3Q8NEA6 775 aa7.38□□□□□ -1.23
LAMA4-217ENST00000521693 FAM168AQ92567 244 aa7.38□□□□□ -1.23
LAMA4-217ENST00000521693 WDR89Q96FK6 387 aaPredicted RBP7.38□□□□□ -1.23
LAMA4-217ENST00000521693 ZC3H12CQ9C0D7 883 aaKnown RBP7.38□□□□□ -1.23
LAMA4-217ENST00000521693 CCDC86Q9H6F5 360 aaKnown RBP7.38□□□□□ -1.23
LAMA4-217ENST00000521693 EGFL7Q9UHF1 273 aa7.38□□□□□ -1.23
LAMA4-217ENST00000521693 ZBTB7CA1YPR0 619 aa7.37□□□□□ -1.23
LAMA4-217ENST00000521693 DBX1A6NMT0 343 aa7.37□□□□□ -1.23
LAMA4-217ENST00000521693 NDUFB5O43674 189 aa7.37□□□□□ -1.23
LAMA4-217ENST00000521693 RNASE1P07998 156 aaKnown RBP7.37□□□□□ -1.23
LAMA4-217ENST00000521693 PRKCQQ04759 706 aa7.37□□□□□ -1.23
LAMA4-217ENST00000521693 PDE3BQ13370 1112 aa7.37□□□□□ -1.23
LAMA4-217ENST00000521693 ORC1Q13415 861 aa7.37□□□□□ -1.23
LAMA4-217ENST00000521693 PKN1Q16512 942 aa7.37□□□□□ -1.23
LAMA4-217ENST00000521693 PI4K2BQ8TCG2 481 aa7.37□□□□□ -1.23
LAMA4-217ENST00000521693 ABCB6Q9NP58 842 aa7.37□□□□□ -1.23
LAMA4-217ENST00000521693 MBNL3Q9NUK0 354 aaKnown RBP7.37□□□□□ -1.23
LAMA4-217ENST00000521693 CARNS1A5YM72 827 aa7.36□□□□□ -1.23
LAMA4-217ENST00000521693 H3BRB1 525 aa7.36□□□□□ -1.23
LAMA4-217ENST00000521693 RNGTTO60942 597 aaKnown RBP7.36□□□□□ -1.23
LAMA4-217ENST00000521693 ZNF157P51786 506 aaPredicted RBP7.36□□□□□ -1.23
LAMA4-217ENST00000521693 IFI16Q16666 785 aaKnown RBP7.36□□□□□ -1.23
LAMA4-217ENST00000521693 PRPF40BQ6NWY9 871 aaKnown RBP7.36□□□□□ -1.23
LAMA4-217ENST00000521693 GLYCTKQ8IVS8 523 aa7.36□□□□□ -1.23
LAMA4-217ENST00000521693 TUT1Q9H6E5 874 aaKnown RBP7.36□□□□□ -1.23
LAMA4-217ENST00000521693 MKNK2Q9HBH9 465 aa7.36□□□□□ -1.23
LAMA4-217ENST00000521693 DISC1Q9NRI5 854 aa7.36□□□□□ -1.23
LAMA4-217ENST00000521693 ADAMTS6Q9UKP5 1117 aa7.36□□□□□ -1.23
LAMA4-217ENST00000521693 TMEM238LA0A1B0GVL6 79 aa7.35□□□□□ -1.23
LAMA4-217ENST00000521693 ZNF862O60290 1169 aa7.35□□□□□ -1.23
LAMA4-217ENST00000521693 GADD45BO75293 160 aaPredicted RBP7.35□□□□□ -1.23
LAMA4-217ENST00000521693 TTLL4Q14679 1199 aa7.35□□□□□ -1.23
LAMA4-217ENST00000521693 AOC3Q16853 763 aa7.35□□□□□ -1.23
LAMA4-217ENST00000521693 KIF4BQ2VIQ3 1234 aa7.35□□□□□ -1.23
LAMA4-217ENST00000521693 KSR1Q8IVT5 923 aa7.35□□□□□ -1.23
LAMA4-217ENST00000521693 TMEM40Q8WWA1 233 aa7.35□□□□□ -1.23
LAMA4-217ENST00000521693 HRASLS5Q96KN8 279 aa7.35□□□□□ -1.23
LAMA4-217ENST00000521693 KRT82Q9NSB4 513 aa7.35□□□□□ -1.23
LAMA4-217ENST00000521693 TRAK1Q9UPV9 953 aa7.35□□□□□ -1.23
LAMA4-217ENST00000521693 GSTP1P09211 210 aaKnown RBP7.34□□□□□ -1.23
LAMA4-217ENST00000521693 HCLS1P14317 486 aaPredicted RBP7.34□□□□□ -1.23
LAMA4-217ENST00000521693 CD96P40200 585 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms