RNA–Protein interactions for RNA: ENST00000521368.5

CTNNA1-226, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-226ENST00000521368 PDE1AP54750 535 aa16.74■□□□□ 0.27
CTNNA1-226ENST00000521368 TMOD2Q9NZR1 351 aa16.74■□□□□ 0.27
CTNNA1-226ENST00000521368 TRAF5O00463 557 aa16.73■□□□□ 0.27
CTNNA1-226ENST00000521368 TSHZ3Q63HK5 1081 aa16.73■□□□□ 0.27
CTNNA1-226ENST00000521368 CDC42EP5Q6NZY7 148 aa16.73■□□□□ 0.27
CTNNA1-226ENST00000521368 VEZTQ9HBM0 779 aa16.73■□□□□ 0.27
CTNNA1-226ENST00000521368 MYH7P12883 1935 aa16.72■□□□□ 0.27
CTNNA1-226ENST00000521368 BTDP43251 543 aa16.72■□□□□ 0.27
CTNNA1-226ENST00000521368 TNNI2P48788 182 aa16.72■□□□□ 0.27
CTNNA1-226ENST00000521368 CENPQQ7L2Z9 268 aaPredicted RBP16.72■□□□□ 0.27
CTNNA1-226ENST00000521368 FAM83AQ86UY5 434 aa16.72■□□□□ 0.27
CTNNA1-226ENST00000521368 CERS3Q8IU89 383 aa16.72■□□□□ 0.27
CTNNA1-226ENST00000521368 EDC3Q96F86 508 aaKnown RBP16.72■□□□□ 0.27
CTNNA1-226ENST00000521368 CDCA5Q96FF9 252 aa16.72■□□□□ 0.27
CTNNA1-226ENST00000521368 NOL10Q9BSC4 688 aaKnown RBP16.72■□□□□ 0.27
CTNNA1-226ENST00000521368 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.72■□□□□ 0.27
CTNNA1-226ENST00000521368 DEFB129Q9H1M3 183 aa16.72■□□□□ 0.27
CTNNA1-226ENST00000521368 OSBPL3Q9H4L5 887 aa16.72■□□□□ 0.27
CTNNA1-226ENST00000521368 RFX7Q2KHR2 1363 aa16.72■□□□□ 0.27
CTNNA1-226ENST00000521368 TMEM88BA6NKF7 163 aa16.71■□□□□ 0.27
CTNNA1-226ENST00000521368 BAG3O95817 575 aa16.71■□□□□ 0.27
CTNNA1-226ENST00000521368 PLCG2P16885 1265 aa16.71■□□□□ 0.27
CTNNA1-226ENST00000521368 PPP4CP60510 307 aa16.71■□□□□ 0.27
CTNNA1-226ENST00000521368 SLC9C2Q5TAH2 1124 aa16.71■□□□□ 0.27
CTNNA1-226ENST00000521368 MAGEB6Q8N7X4 407 aa16.71■□□□□ 0.27
CTNNA1-226ENST00000521368 IDI2Q9BXS1 227 aa16.71■□□□□ 0.27
CTNNA1-226ENST00000521368 CREBZFQ9NS37 354 aa16.71■□□□□ 0.27
CTNNA1-226ENST00000521368 USP40Q9NVE5 1235 aa16.71■□□□□ 0.27
CTNNA1-226ENST00000521368 RPAP1Q9BWH6 1393 aaPredicted RBP16.71■□□□□ 0.27
CTNNA1-226ENST00000521368 CNTNAP1P78357 1384 aa16.7■□□□□ 0.26
CTNNA1-226ENST00000521368 PDE6AP16499 860 aa16.7■□□□□ 0.26
CTNNA1-226ENST00000521368 CYP7A1P22680 504 aa16.7■□□□□ 0.26
CTNNA1-226ENST00000521368 RHBDL3P58872 404 aa16.7■□□□□ 0.26
CTNNA1-226ENST00000521368 FMR1Q06787 632 aaKnown RBP eCLIP16.7■□□□□ 0.264e-7■■■■□ 25.4
CTNNA1-226ENST00000521368 RASA3Q14644 834 aa16.7■□□□□ 0.26
CTNNA1-226ENST00000521368 CST9Q5W186 159 aa16.7■□□□□ 0.26
CTNNA1-226ENST00000521368 ZSCAN25Q6NSZ9 544 aa16.7■□□□□ 0.26
CTNNA1-226ENST00000521368 ADGRA1Q86SQ6 560 aa16.7■□□□□ 0.26
CTNNA1-226ENST00000521368 PLEKHM2Q8IWE5 1019 aa16.7■□□□□ 0.26
CTNNA1-226ENST00000521368 KBTBD3Q8NAB2 608 aa16.7■□□□□ 0.26
CTNNA1-226ENST00000521368 SCAF8Q9UPN6 1271 aaKnown RBP16.7■□□□□ 0.26
CTNNA1-226ENST00000521368 TCRBV5S4A2TA0A5A2 114 aa16.69■□□□□ 0.26
CTNNA1-226ENST00000521368 TCP10L2B9ZVM9 353 aa16.69■□□□□ 0.26
CTNNA1-226ENST00000521368 NPM3O75607 178 aaKnown RBP16.69■□□□□ 0.26
CTNNA1-226ENST00000521368 CELF2O95319 508 aaKnown RBP16.69■□□□□ 0.26
CTNNA1-226ENST00000521368 CCDC136Q96JN2 1154 aa16.69■□□□□ 0.26
CTNNA1-226ENST00000521368 PAPPA2Q9BXP8 1791 aa16.69■□□□□ 0.26
CTNNA1-226ENST00000521368 FOCADQ5VW36 1801 aa16.68■□□□□ 0.26
CTNNA1-226ENST00000521368 ENTPD3O75355 529 aa16.68■□□□□ 0.26
CTNNA1-226ENST00000521368 WDHD1O75717 1129 aaPredicted RBP16.68■□□□□ 0.26
CTNNA1-226ENST00000521368 NF2P35240 595 aa16.68■□□□□ 0.26
CTNNA1-226ENST00000521368 ADD2P35612 726 aa16.68■□□□□ 0.26
CTNNA1-226ENST00000521368 CACNB3P54284 484 aa16.68■□□□□ 0.26
CTNNA1-226ENST00000521368 FKBP1BP68106 108 aa16.68■□□□□ 0.26
CTNNA1-226ENST00000521368 UBE3CQ15386 1083 aa16.68■□□□□ 0.26
CTNNA1-226ENST00000521368 LRRFIP1Q32MZ4 808 aaKnown RBP16.68■□□□□ 0.26
CTNNA1-226ENST00000521368 SUPT20HL1Q3ZLR7 823 aa16.68■□□□□ 0.26
CTNNA1-226ENST00000521368 DLK2Q6UY11 383 aa16.68■□□□□ 0.26
CTNNA1-226ENST00000521368 TICAM2Q86XR7 235 aa16.68■□□□□ 0.26
CTNNA1-226ENST00000521368 FAM151AQ8WW52 585 aa16.68■□□□□ 0.26
CTNNA1-226ENST00000521368 AATFQ9NY61 560 aaKnown RBP eCLIP16.68■□□□□ 0.26
CTNNA1-226ENST00000521368 ZNF532Q9HCE3 1301 aa16.68■□□□□ 0.26
CTNNA1-226ENST00000521368 COL2A1P02458 1487 aaPredicted RBP16.67■□□□□ 0.26
CTNNA1-226ENST00000521368 ZFYP08048 801 aaPredicted RBP16.67■□□□□ 0.26
CTNNA1-226ENST00000521368 PDE4AP27815 886 aa16.67■□□□□ 0.26
CTNNA1-226ENST00000521368 NFIAQ12857 509 aa16.67■□□□□ 0.26
CTNNA1-226ENST00000521368 EVI5LQ96CN4 794 aa16.67■□□□□ 0.26
CTNNA1-226ENST00000521368 TEPSINQ96N21 525 aa16.67■□□□□ 0.26
CTNNA1-226ENST00000521368 ZNF408Q9H9D4 720 aa16.67■□□□□ 0.26
CTNNA1-226ENST00000521368 FAM198AQ9UFP1 575 aa16.67■□□□□ 0.26
CTNNA1-226ENST00000521368 CDK5RAP2Q96SN8 1893 aa16.67■□□□□ 0.26
CTNNA1-226ENST00000521368 SSC5DA1L4H1 1573 aa16.66■□□□□ 0.26
CTNNA1-226ENST00000521368 PRAMEF18Q5VWM3 479 aa16.66■□□□□ 0.26
CTNNA1-226ENST00000521368 TEX11Q8IYF3 940 aa16.66■□□□□ 0.26
CTNNA1-226ENST00000521368 C2orf69Q8N8R5 385 aa16.66■□□□□ 0.26
CTNNA1-226ENST00000521368 SH3RF3Q8TEJ3 882 aaPredicted RBP16.66■□□□□ 0.26
CTNNA1-226ENST00000521368 HOOK2Q96ED9 719 aa16.66■□□□□ 0.26
CTNNA1-226ENST00000521368 RIOK1Q9BRS2 568 aaKnown RBP16.66■□□□□ 0.26
CTNNA1-226ENST00000521368 TMEM39BQ9GZU3 492 aa16.66■□□□□ 0.26
CTNNA1-226ENST00000521368 GBA2Q9HCG7 927 aaPredicted RBP16.66■□□□□ 0.26
CTNNA1-226ENST00000521368 MAGEB6P1A0A0J9YX57 407 aa16.65■□□□□ 0.26
CTNNA1-226ENST00000521368 RGS3P49796 1198 aa16.65■□□□□ 0.26
CTNNA1-226ENST00000521368 MIGA1Q8NAN2 632 aa16.65■□□□□ 0.26
CTNNA1-226ENST00000521368 HHIPL1Q96JK4 782 aa16.65■□□□□ 0.26
CTNNA1-226ENST00000521368 PPP4R2Q9NY27 417 aa16.65■□□□□ 0.26
CTNNA1-226ENST00000521368 TLL2Q9Y6L7 1015 aa16.65■□□□□ 0.26
CTNNA1-226ENST00000521368 ATRNL1Q5VV63 1379 aa16.64■□□□□ 0.26
CTNNA1-226ENST00000521368 RNF113AO15541 343 aaKnown RBP16.64■□□□□ 0.25
CTNNA1-226ENST00000521368 DYNLL1P63167 89 aaKnown RBP16.64■□□□□ 0.25
CTNNA1-226ENST00000521368 TCP10Q12799 353 aa16.64■□□□□ 0.25
CTNNA1-226ENST00000521368 NBPF12Q5TAG4 269 aaPredicted RBP16.64■□□□□ 0.25
CTNNA1-226ENST00000521368 SAPCD2Q86UD0 394 aa16.64■□□□□ 0.25
CTNNA1-226ENST00000521368 FSD1Q9BTV5 496 aa16.64■□□□□ 0.25
CTNNA1-226ENST00000521368 DDX4Q9NQI0 724 aaKnown RBP16.64■□□□□ 0.25
CTNNA1-226ENST00000521368 RASSF10A6NK89 507 aa16.63■□□□□ 0.25
CTNNA1-226ENST00000521368 PPP1R12BO60237 982 aaPredicted RBP16.63■□□□□ 0.25
CTNNA1-226ENST00000521368 PICALMQ13492 652 aa16.63■□□□□ 0.25
CTNNA1-226ENST00000521368 MAP3K11Q16584 847 aa16.63■□□□□ 0.25
CTNNA1-226ENST00000521368 APPBP2Q92624 585 aa16.63■□□□□ 0.25
CTNNA1-226ENST00000521368 OSBPL5Q9H0X9 879 aaPredicted RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms