RNA–Protein interactions for RNA: ENST00000520947.1

PTPN12-214, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-214ENST00000520947 FAM8A1Q9UBU6 413 aa8.56□□□□□ -1.04
PTPN12-214ENST00000520947 ACTL7BQ9Y614 415 aa8.56□□□□□ -1.04
PTPN12-214ENST00000520947 RAB6AP20340 208 aa8.55□□□□□ -1.04
PTPN12-214ENST00000520947 GNA15P30679 374 aa8.55□□□□□ -1.04
PTPN12-214ENST00000520947 COL19A1Q14993 1142 aa8.55□□□□□ -1.04
PTPN12-214ENST00000520947 RNF43Q68DV7 783 aa8.55□□□□□ -1.04
PTPN12-214ENST00000520947 NECAB3Q96P71 396 aaPredicted RBP8.55□□□□□ -1.04
PTPN12-214ENST00000520947 CBX8Q9HC52 389 aa8.55□□□□□ -1.04
PTPN12-214ENST00000520947 FAM95CA0A1B0GW59 222 aa8.54□□□□□ -1.04
PTPN12-214ENST00000520947 GSC2O15499 205 aa8.54□□□□□ -1.04
PTPN12-214ENST00000520947 ZNF862O60290 1169 aa8.54□□□□□ -1.04
PTPN12-214ENST00000520947 EIF4BP23588 611 aaKnown RBP8.54□□□□□ -1.04
PTPN12-214ENST00000520947 ARNTP27540 789 aa8.54□□□□□ -1.04
PTPN12-214ENST00000520947 PDZD3Q86UT5 571 aa8.54□□□□□ -1.04
PTPN12-214ENST00000520947 CEP44Q9C0F1 390 aa8.54□□□□□ -1.04
PTPN12-214ENST00000520947 FAM105AQ9NUU6 356 aa8.54□□□□□ -1.04
PTPN12-214ENST00000520947 PPP1R9AQ9ULJ8 1098 aa8.54□□□□□ -1.04
PTPN12-214ENST00000520947 ENC1O14682 589 aa8.53□□□□□ -1.04
PTPN12-214ENST00000520947 PAGE1O75459 146 aa8.53□□□□□ -1.04
PTPN12-214ENST00000520947 NME2P22392 152 aa8.53□□□□□ -1.04
PTPN12-214ENST00000520947 ASPAP45381 313 aa8.53□□□□□ -1.04
PTPN12-214ENST00000520947 MAP1SQ66K74 1059 aaPredicted RBP8.53□□□□□ -1.04
PTPN12-214ENST00000520947 MFSD14AQ96MC6 490 aa8.53□□□□□ -1.04
PTPN12-214ENST00000520947 FRMD6Q96NE9 622 aa8.53□□□□□ -1.04
PTPN12-214ENST00000520947 DBNDD2Q9BQY9 259 aa8.53□□□□□ -1.04
PTPN12-214ENST00000520947 YIPF2Q9BWQ6 316 aa8.53□□□□□ -1.04
PTPN12-214ENST00000520947 PPM1HQ9ULR3 514 aa8.53□□□□□ -1.04
PTPN12-214ENST00000520947 TTF2Q9UNY4 1162 aaKnown RBP8.53□□□□□ -1.04
PTPN12-214ENST00000520947 CELA3AP09093 270 aa8.52□□□□□ -1.05
PTPN12-214ENST00000520947 PAOXQ6QHF9 649 aa8.52□□□□□ -1.05
PTPN12-214ENST00000520947 SLC51AQ86UW1 340 aa8.52□□□□□ -1.05
PTPN12-214ENST00000520947 FBXL6Q8N531 539 aa8.52□□□□□ -1.05
PTPN12-214ENST00000520947 GRIN3AQ8TCU5 1115 aa8.52□□□□□ -1.05
PTPN12-214ENST00000520947 KRTAP4-8Q9BYQ9 185 aa8.52□□□□□ -1.05
PTPN12-214ENST00000520947 RNF112Q9ULX5 631 aa8.52□□□□□ -1.05
PTPN12-214ENST00000520947 TMPRSS2O15393 492 aa8.51□□□□□ -1.05
PTPN12-214ENST00000520947 TGFB1P01137 390 aa8.51□□□□□ -1.05
PTPN12-214ENST00000520947 NFICP08651 508 aa8.51□□□□□ -1.05
PTPN12-214ENST00000520947 SLFN14P0C7P3 912 aa8.51□□□□□ -1.05
PTPN12-214ENST00000520947 FGD1P98174 961 aa8.51□□□□□ -1.05
PTPN12-214ENST00000520947 MPRIPQ6WCQ1 1025 aa8.51□□□□□ -1.05
PTPN12-214ENST00000520947 SHKBP1Q8TBC3 707 aa8.51□□□□□ -1.05
PTPN12-214ENST00000520947 EMILIN2Q9BXX0 1053 aa8.51□□□□□ -1.05
PTPN12-214ENST00000520947 LGR6Q9HBX8 967 aa8.51□□□□□ -1.05
PTPN12-214ENST00000520947 KRT82Q9NSB4 513 aa8.51□□□□□ -1.05
PTPN12-214ENST00000520947 PARP2Q9UGN5 583 aa8.51□□□□□ -1.05
PTPN12-214ENST00000520947 WDR64B1ANS9 1081 aa8.5□□□□□ -1.05
PTPN12-214ENST00000520947 TAGLNQ01995 201 aaKnown RBP8.5□□□□□ -1.05
PTPN12-214ENST00000520947 KIF4BQ2VIQ3 1234 aa8.5□□□□□ -1.05
PTPN12-214ENST00000520947 TMCO4Q5TGY1 634 aa8.5□□□□□ -1.05
PTPN12-214ENST00000520947 ZDHHC13Q8IUH4 622 aa8.5□□□□□ -1.05
PTPN12-214ENST00000520947 ACSBG1Q96GR2 724 aa8.5□□□□□ -1.05
PTPN12-214ENST00000520947 FAM161BQ96MY7 647 aa8.5□□□□□ -1.05
PTPN12-214ENST00000520947 CCDC9Q9Y3X0 531 aaKnown RBP8.5□□□□□ -1.05
PTPN12-214ENST00000520947 SAMM50Q9Y512 469 aa8.5□□□□□ -1.05
PTPN12-214ENST00000520947 AK5Q9Y6K8 562 aa8.5□□□□□ -1.05
PTPN12-214ENST00000520947 BMP6P22004 513 aa8.49□□□□□ -1.05
PTPN12-214ENST00000520947 SSTR4P31391 388 aa8.49□□□□□ -1.05
PTPN12-214ENST00000520947 HNRNPUQ00839 825 aaKnown RBP eCLIP8.49□□□□□ -1.05
PTPN12-214ENST00000520947 XPCQ01831 940 aaPredicted RBP8.49□□□□□ -1.05
PTPN12-214ENST00000520947 ID3Q02535 119 aa8.49□□□□□ -1.05
PTPN12-214ENST00000520947 PSMD2Q13200 908 aa8.49□□□□□ -1.05
PTPN12-214ENST00000520947 FBXO33Q7Z6M2 555 aa8.49□□□□□ -1.05
PTPN12-214ENST00000520947 SHISA5Q8N114 240 aa8.49□□□□□ -1.05
PTPN12-214ENST00000520947 GPBAR1Q8TDU6 330 aa8.49□□□□□ -1.05
PTPN12-214ENST00000520947 EZH1Q92800 747 aaPredicted RBP8.49□□□□□ -1.05
PTPN12-214ENST00000520947 SEMA6CQ9H3T2 930 aa8.49□□□□□ -1.05
PTPN12-214ENST00000520947 ACSS3Q9H6R3 686 aa8.49□□□□□ -1.05
PTPN12-214ENST00000520947 CRIM1Q9NZV1 1036 aa8.49□□□□□ -1.05
PTPN12-214ENST00000520947 DAGLAQ9Y4D2 1042 aa8.49□□□□□ -1.05
PTPN12-214ENST00000520947 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.48□□□□□ -1.05
PTPN12-214ENST00000520947 ZNF252P-AS1Q0IIN9 211 aa8.48□□□□□ -1.05
PTPN12-214ENST00000520947 ARTNQ5T4W7 220 aa8.48□□□□□ -1.05
PTPN12-214ENST00000520947 RASIP1Q5U651 963 aa8.48□□□□□ -1.05
PTPN12-214ENST00000520947 TBC1D32Q96NH3 1257 aa8.48□□□□□ -1.05
PTPN12-214ENST00000520947 FANCD2OSQ96PS1 177 aa8.48□□□□□ -1.05
PTPN12-214ENST00000520947 PSMG3-AS1Q96PY0 264 aa8.48□□□□□ -1.05
PTPN12-214ENST00000520947 GSX1Q9H4S2 264 aaPredicted RBP8.48□□□□□ -1.05
PTPN12-214ENST00000520947 PIDD1Q9HB75 910 aa8.48□□□□□ -1.05
PTPN12-214ENST00000520947 PCDHGC5Q9Y5F6 944 aa8.48□□□□□ -1.05
PTPN12-214ENST00000520947 SYNGAP1Q96PV0 1343 aa8.48□□□□□ -1.05
PTPN12-214ENST00000520947 F13BP05160 661 aa8.47□□□□□ -1.05
PTPN12-214ENST00000520947 LRP8Q14114 963 aa8.47□□□□□ -1.05
PTPN12-214ENST00000520947 MAP7Q14244 749 aa8.47□□□□□ -1.05
PTPN12-214ENST00000520947 PCNX4Q63HM2 1172 aa8.47□□□□□ -1.05
PTPN12-214ENST00000520947 ATXN3LQ9H3M9 355 aa8.47□□□□□ -1.05
PTPN12-214ENST00000520947 ZFP64Q9NPA5 681 aa8.47□□□□□ -1.05
PTPN12-214ENST00000520947 PRKAG2Q9UGJ0 569 aa8.47□□□□□ -1.05
PTPN12-214ENST00000520947 PRR19A6NJB7 356 aa8.46□□□□□ -1.06
PTPN12-214ENST00000520947 DYNC1LI2O43237 492 aaPredicted RBP8.46□□□□□ -1.06
PTPN12-214ENST00000520947 HYAL3O43820 417 aaPredicted RBP8.46□□□□□ -1.06
PTPN12-214ENST00000520947 RNGTTO60942 597 aaKnown RBP8.46□□□□□ -1.06
PTPN12-214ENST00000520947 ADMP35318 185 aa8.46□□□□□ -1.06
PTPN12-214ENST00000520947 MFAP1P55081 439 aaKnown RBP8.46□□□□□ -1.06
PTPN12-214ENST00000520947 DAB2P98082 770 aa8.46□□□□□ -1.06
PTPN12-214ENST00000520947 MEI1Q5TIA1 1274 aa8.46□□□□□ -1.06
PTPN12-214ENST00000520947 LLGL2Q6P1M3 1020 aa8.46□□□□□ -1.06
PTPN12-214ENST00000520947 ANKRD24Q8TF21 1146 aa8.46□□□□□ -1.06
PTPN12-214ENST00000520947 DISC1Q9NRI5 854 aa8.46□□□□□ -1.06
PTPN12-214ENST00000520947 ATG3Q9NT62 314 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms