RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 ELNP15502 786 aa10.82□□□□□ -0.68
SDCBP-208ENST00000520228 ARL4DP49703 201 aa10.82□□□□□ -0.68
SDCBP-208ENST00000520228 ZNF157P51786 506 aaPredicted RBP10.82□□□□□ -0.68
SDCBP-208ENST00000520228 SUZ12Q15022 739 aaKnown RBP10.82□□□□□ -0.68
SDCBP-208ENST00000520228 TMEM87AQ8NBN3 555 aa10.82□□□□□ -0.68
SDCBP-208ENST00000520228 NOC4LQ9BVI4 516 aaKnown RBP10.82□□□□□ -0.68
SDCBP-208ENST00000520228 KCNK4Q9NYG8 393 aa10.82□□□□□ -0.68
SDCBP-208ENST00000520228 GPN3Q9UHW5 284 aaPredicted RBP10.82□□□□□ -0.68
SDCBP-208ENST00000520228 MAPKBP1O60336 1514 aa10.82□□□□□ -0.68
SDCBP-208ENST00000520228 FHOD3Q2V2M9 1422 aa10.82□□□□□ -0.68
SDCBP-208ENST00000520228 KDM5BQ9UGL1 1544 aa10.81□□□□□ -0.68
SDCBP-208ENST00000520228 ADAM11O75078 769 aa10.81□□□□□ -0.68
SDCBP-208ENST00000520228 PRRT3Q5FWE3 981 aa10.81□□□□□ -0.68
SDCBP-208ENST00000520228 ASXL2Q76L83 1435 aa10.81□□□□□ -0.68
SDCBP-208ENST00000520228 ABCC10Q5T3U5 1492 aa10.81□□□□□ -0.68
SDCBP-208ENST00000520228 PAGE1O75459 146 aa10.8□□□□□ -0.68
SDCBP-208ENST00000520228 CELA3AP09093 270 aa10.8□□□□□ -0.68
SDCBP-208ENST00000520228 SPATA31C1P0DKV0 1188 aa10.8□□□□□ -0.68
SDCBP-208ENST00000520228 CD68P34810 354 aaPredicted RBP10.8□□□□□ -0.68
SDCBP-208ENST00000520228 GSTM4Q03013 218 aa10.8□□□□□ -0.68
SDCBP-208ENST00000520228 PPP2R3AQ06190 1150 aa10.8□□□□□ -0.68
SDCBP-208ENST00000520228 DCAF11Q8TEB1 546 aa10.8□□□□□ -0.68
SDCBP-208ENST00000520228 IGSF5Q9NSI5 407 aa10.8□□□□□ -0.68
SDCBP-208ENST00000520228 SAMD9Q5K651 1589 aa10.8□□□□□ -0.68
SDCBP-208ENST00000520228 EIF4EBP3O60516 100 aaPredicted RBP10.79□□□□□ -0.68
SDCBP-208ENST00000520228 FANCCQ00597 558 aa10.79□□□□□ -0.68
SDCBP-208ENST00000520228 CCDC85BQ15834 202 aaPredicted RBP10.79□□□□□ -0.68
SDCBP-208ENST00000520228 METTL5Q9NRN9 209 aaKnown RBP10.79□□□□□ -0.68
SDCBP-208ENST00000520228 EFCAB5A4FU69 1503 aa10.79□□□□□ -0.68
SDCBP-208ENST00000520228 ABCA8O94911 1581 aa10.78□□□□□ -0.68
SDCBP-208ENST00000520228 SCAMP3O14828 347 aaKnown RBP10.78□□□□□ -0.68
SDCBP-208ENST00000520228 DDX3YO15523 660 aaKnown RBP10.78□□□□□ -0.68
SDCBP-208ENST00000520228 BMP6P22004 513 aa10.78□□□□□ -0.68
SDCBP-208ENST00000520228 IGF2-ASQ6U949 168 aa10.78□□□□□ -0.68
SDCBP-208ENST00000520228 ALYREFQ86V81 257 aaKnown RBP10.78□□□□□ -0.68
SDCBP-208ENST00000520228 DDX54Q8TDD1 881 aaKnown RBP10.78□□□□□ -0.68
SDCBP-208ENST00000520228 STK35Q8TDR2 534 aa10.78□□□□□ -0.68
SDCBP-208ENST00000520228 NME2P22392 152 aa10.77□□□□□ -0.69
SDCBP-208ENST00000520228 AP3B2Q13367 1082 aa10.77□□□□□ -0.69
SDCBP-208ENST00000520228 GRIK4Q16099 956 aa10.77□□□□□ -0.69
SDCBP-208ENST00000520228 PDZD3Q86UT5 571 aa10.77□□□□□ -0.69
SDCBP-208ENST00000520228 ARHGAP35Q9NRY4 1499 aa10.76□□□□□ -0.69
SDCBP-208ENST00000520228 RNF225M0QZC1 329 aaPredicted RBP10.76□□□□□ -0.69
SDCBP-208ENST00000520228 SELPP16109 830 aa10.76□□□□□ -0.69
SDCBP-208ENST00000520228 GSK3AP49840 483 aa10.76□□□□□ -0.69
SDCBP-208ENST00000520228 NLRP12P59046 1061 aa10.76□□□□□ -0.69
SDCBP-208ENST00000520228 RASIP1Q5U651 963 aa10.76□□□□□ -0.69
SDCBP-208ENST00000520228 ERMP1Q7Z2K6 904 aa10.76□□□□□ -0.69
SDCBP-208ENST00000520228 NPM2Q86SE8 214 aaKnown RBP10.76□□□□□ -0.69
SDCBP-208ENST00000520228 ATP10BO94823 1461 aa10.75□□□□□ -0.69
SDCBP-208ENST00000520228 LOC105371045A0A1W2PR82 267 aa10.75□□□□□ -0.69
SDCBP-208ENST00000520228 CYP11A1P05108 521 aa10.75□□□□□ -0.69
SDCBP-208ENST00000520228 CTSBP07858 339 aa10.75□□□□□ -0.69
SDCBP-208ENST00000520228 ARNTP27540 789 aa10.75□□□□□ -0.69
SDCBP-208ENST00000520228 SHISA2Q6UWI4 295 aa10.75□□□□□ -0.69
SDCBP-208ENST00000520228 METTL16Q86W50 562 aaKnown RBP10.75□□□□□ -0.69
SDCBP-208ENST00000520228 SULF2Q8IWU5 870 aa10.75□□□□□ -0.69
SDCBP-208ENST00000520228 RSRP1Q9BUV0 290 aa10.75□□□□□ -0.69
SDCBP-208ENST00000520228 FMN1Q68DA7 1419 aa10.75□□□□□ -0.69
SDCBP-208ENST00000520228 LOC100289279A0A1B0GTE1 492 aa10.74□□□□□ -0.69
SDCBP-208ENST00000520228 WISP1O95388 367 aa10.74□□□□□ -0.69
SDCBP-208ENST00000520228 ECEL1O95672 775 aa10.74□□□□□ -0.69
SDCBP-208ENST00000520228 ZNF76P36508 570 aa10.74□□□□□ -0.69
SDCBP-208ENST00000520228 ZNF252P-AS1Q0IIN9 211 aa10.74□□□□□ -0.69
SDCBP-208ENST00000520228 POU4F3Q15319 338 aa10.74□□□□□ -0.69
SDCBP-208ENST00000520228 PCNX4Q63HM2 1172 aa10.74□□□□□ -0.69
SDCBP-208ENST00000520228 UBASH3BQ8TF42 649 aa10.74□□□□□ -0.69
SDCBP-208ENST00000520228 LENG1Q96BZ8 264 aaPredicted RBP10.74□□□□□ -0.69
SDCBP-208ENST00000520228 WDR7Q9Y4E6 1490 aa10.74□□□□□ -0.69
SDCBP-208ENST00000520228 DLGAP3O95886 979 aa10.73□□□□□ -0.69
SDCBP-208ENST00000520228 MAOBP27338 520 aa10.73□□□□□ -0.69
SDCBP-208ENST00000520228 HDLBPQ00341 1268 aaKnown RBP10.73□□□□□ -0.69
SDCBP-208ENST00000520228 KCNMA1Q12791 1236 aa10.73□□□□□ -0.69
SDCBP-208ENST00000520228 TMEM130Q8N3G9 435 aa10.73□□□□□ -0.69
SDCBP-208ENST00000520228 RNF34Q969K3 372 aa10.73□□□□□ -0.69
SDCBP-208ENST00000520228 CACNA2D2Q9NY47 1150 aa10.73□□□□□ -0.69
SDCBP-208ENST00000520228 CLIP1P30622 1438 aa10.73□□□□□ -0.69
SDCBP-208ENST00000520228 NUP153P49790 1475 aaKnown RBP10.73□□□□□ -0.69
SDCBP-208ENST00000520228 EPRSP07814 1512 aaKnown RBP10.73□□□□□ -0.69
SDCBP-208ENST00000520228 DIP2BQ9P265 1576 aa10.73□□□□□ -0.69
SDCBP-208ENST00000520228 PLEKHD1A6NEE1 506 aa10.72□□□□□ -0.69
SDCBP-208ENST00000520228 GSTP1P09211 210 aaKnown RBP10.72□□□□□ -0.69
SDCBP-208ENST00000520228 RLBP1P12271 317 aa10.72□□□□□ -0.69
SDCBP-208ENST00000520228 TCF3P15923 654 aa10.72□□□□□ -0.69
SDCBP-208ENST00000520228 LIG3P49916 1009 aa10.72□□□□□ -0.69
SDCBP-208ENST00000520228 RPS26P62854 115 aaKnown RBP10.72□□□□□ -0.69
SDCBP-208ENST00000520228 TTBK2Q6IQ55 1244 aa10.72□□□□□ -0.69
SDCBP-208ENST00000520228 MRPL18Q9H0U6 180 aaKnown RBP10.72□□□□□ -0.69
SDCBP-208ENST00000520228 SAMM50Q9Y512 469 aa10.72□□□□□ -0.69
SDCBP-208ENST00000520228 ZCCHC11Q5TAX3 1644 aaKnown RBP10.72□□□□□ -0.69
SDCBP-208ENST00000520228 KRBA1A5PL33 1030 aa10.71□□□□□ -0.69
SDCBP-208ENST00000520228 DUOXA2Q1HG44 320 aa10.71□□□□□ -0.69
SDCBP-208ENST00000520228 AGMOQ6ZNB7 445 aa10.71□□□□□ -0.69
SDCBP-208ENST00000520228 KIAA1211Q6ZU35 1233 aa10.71□□□□□ -0.69
SDCBP-208ENST00000520228 HS2ST1Q7LGA3 356 aa10.71□□□□□ -0.69
SDCBP-208ENST00000520228 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.71□□□□□ -0.69
SDCBP-208ENST00000520228 DCAF5Q96JK2 942 aa10.71□□□□□ -0.69
SDCBP-208ENST00000520228 CORO1BQ9BR76 489 aa10.71□□□□□ -0.69
SDCBP-208ENST00000520228 USP26Q9BXU7 913 aa10.71□□□□□ -0.69
SDCBP-208ENST00000520228 EMILIN2Q9BXX0 1053 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms