RNA–Protein interactions for RNA: ENST00000519583.5

CLK4-203, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,462 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-203ENST00000519583 ZNF280AP59817 542 aaPredicted RBP9.5□□□□□ -0.89
CLK4-203ENST00000519583 RASGRF1Q13972 1273 aa9.5□□□□□ -0.89
CLK4-203ENST00000519583 CHADLQ6NUI6 762 aa9.5□□□□□ -0.89
CLK4-203ENST00000519583 WDR66Q8TBY9 1149 aa9.5□□□□□ -0.89
CLK4-203ENST00000519583 ARAP2Q8WZ64 1704 aa9.5□□□□□ -0.89
CLK4-203ENST00000519583 SLC27A2O14975 620 aa9.5□□□□□ -0.89
CLK4-203ENST00000519583 SCARF1Q14162 830 aa9.5□□□□□ -0.89
CLK4-203ENST00000519583 MAP1SQ66K74 1059 aaPredicted RBP9.5□□□□□ -0.89
CLK4-203ENST00000519583 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.5□□□□□ -0.89
CLK4-203ENST00000519583 TTC14Q96N46 770 aa9.5□□□□□ -0.89
CLK4-203ENST00000519583 TTF2Q9UNY4 1162 aaKnown RBP9.5□□□□□ -0.89
CLK4-203ENST00000519583 COL1A1P02452 1464 aaPredicted RBP9.5□□□□□ -0.89
CLK4-203ENST00000519583 UQCRFS1P1P0C7P4 283 aa9.5□□□□□ -0.89
CLK4-203ENST00000519583 ZKSCAN1P17029 563 aaPredicted RBP9.5□□□□□ -0.89
CLK4-203ENST00000519583 C1QTNF8P60827 252 aa9.5□□□□□ -0.89
CLK4-203ENST00000519583 GRIK5Q16478 980 aa9.5□□□□□ -0.89
CLK4-203ENST00000519583 MCMDC2Q4G0Z9 681 aa9.5□□□□□ -0.89
CLK4-203ENST00000519583 CWC22Q9HCG8 908 aaKnown RBP9.5□□□□□ -0.89
CLK4-203ENST00000519583 ZNF646O15015 1829 aaPredicted RBP9.49□□□□□ -0.89
CLK4-203ENST00000519583 CUL4AQ13619 759 aa9.49□□□□□ -0.89
CLK4-203ENST00000519583 LARP6Q9BRS8 491 aaKnown RBP9.49□□□□□ -0.89
CLK4-203ENST00000519583 ARID4AP29374 1257 aaPredicted RBP9.49□□□□□ -0.89
CLK4-203ENST00000519583 RBM5P52756 815 aaKnown RBP eCLIP9.49□□□□□ -0.89
CLK4-203ENST00000519583 AK2P54819 239 aa9.49□□□□□ -0.89
CLK4-203ENST00000519583 PKP1Q13835 747 aa9.49□□□□□ -0.89
CLK4-203ENST00000519583 PI16Q6UXB8 463 aa9.49□□□□□ -0.89
CLK4-203ENST00000519583 HMG20BQ9P0W2 317 aa9.49□□□□□ -0.89
CLK4-203ENST00000519583 ABCF2Q9UG63 623 aa9.49□□□□□ -0.89
CLK4-203ENST00000519583 TAF6LQ9Y6J9 622 aa9.49□□□□□ -0.89
CLK4-203ENST00000519583 FSTL1Q12841 308 aa9.48□□□□□ -0.89
CLK4-203ENST00000519583 SPATA5Q8NB90 893 aa9.48□□□□□ -0.89
CLK4-203ENST00000519583 MYH13Q9UKX3 1938 aa9.48□□□□□ -0.89
CLK4-203ENST00000519583 MCAMP43121 646 aa9.48□□□□□ -0.89
CLK4-203ENST00000519583 ZAP70P43403 619 aa9.48□□□□□ -0.89
CLK4-203ENST00000519583 DLGAP5Q15398 846 aa9.48□□□□□ -0.89
CLK4-203ENST00000519583 CFAP100Q494V2 611 aa9.48□□□□□ -0.89
CLK4-203ENST00000519583 ZMYM1Q5SVZ6 1142 aa9.48□□□□□ -0.89
CLK4-203ENST00000519583 RNF20Q5VTR2 975 aa9.48□□□□□ -0.89
CLK4-203ENST00000519583 RUFY3Q7L099 469 aa9.48□□□□□ -0.89
CLK4-203ENST00000519583 TM6SF1Q9BZW5 370 aa9.48□□□□□ -0.89
CLK4-203ENST00000519583 ZSWIM6Q9HCJ5 1215 aa9.48□□□□□ -0.89
CLK4-203ENST00000519583 RNF113AO15541 343 aaKnown RBP9.48□□□□□ -0.89
CLK4-203ENST00000519583 NUCB2P80303 420 aa9.48□□□□□ -0.89
CLK4-203ENST00000519583 NBPF9Q3BBW0 867 aa9.48□□□□□ -0.89
CLK4-203ENST00000519583 ZC3H15Q8WU90 426 aaKnown RBP9.48□□□□□ -0.89
CLK4-203ENST00000519583 GBP4Q96PP9 640 aa9.48□□□□□ -0.89
CLK4-203ENST00000519583 PDRG1Q9NUG6 133 aa9.48□□□□□ -0.89
CLK4-203ENST00000519583 CYP46A1Q9Y6A2 500 aa9.48□□□□□ -0.89
CLK4-203ENST00000519583 ASTN2O75129 1339 aaPredicted RBP9.48□□□□□ -0.89
CLK4-203ENST00000519583 LDHBP07195 334 aaKnown RBP9.47□□□□□ -0.89
CLK4-203ENST00000519583 PRDX5P30044 214 aa9.47□□□□□ -0.89
CLK4-203ENST00000519583 MMP14P50281 582 aa9.47□□□□□ -0.89
CLK4-203ENST00000519583 COL9A3Q14050 684 aaPredicted RBP9.47□□□□□ -0.89
CLK4-203ENST00000519583 IL27Q8NEV9 243 aa9.47□□□□□ -0.89
CLK4-203ENST00000519583 HELLSQ9NRZ9 838 aa9.47□□□□□ -0.89
CLK4-203ENST00000519583 GGA3Q9NZ52 723 aa9.47□□□□□ -0.89
CLK4-203ENST00000519583 PCDHAC2Q9Y5I4 1007 aa9.47□□□□□ -0.89
CLK4-203ENST00000519583 RPAP1Q9BWH6 1393 aaPredicted RBP9.47□□□□□ -0.89
CLK4-203ENST00000519583 WNT10BO00744 389 aa9.47□□□□□ -0.89
CLK4-203ENST00000519583 SUGT1Q9Y2Z0 365 aa9.47□□□□□ -0.89
CLK4-203ENST00000519583 MAST3O60307 1309 aa9.47□□□□□ -0.89
CLK4-203ENST00000519583 DDX11L8A8MPP1 907 aa9.47□□□□□ -0.89
CLK4-203ENST00000519583 CYP2E1P05181 493 aaPredicted RBP9.47□□□□□ -0.89
CLK4-203ENST00000519583 CRKP46108 304 aa9.47□□□□□ -0.89
CLK4-203ENST00000519583 VPS53Q5VIR6 699 aa9.47□□□□□ -0.89
CLK4-203ENST00000519583 ANGEL2Q5VTE6 544 aaKnown RBP9.47□□□□□ -0.89
CLK4-203ENST00000519583 DCPSQ96C86 337 aaKnown RBP9.47□□□□□ -0.89
CLK4-203ENST00000519583 INTS4Q96HW7 963 aaKnown RBP9.47□□□□□ -0.89
CLK4-203ENST00000519583 LIMCH1Q9UPQ0 1083 aa9.47□□□□□ -0.89
CLK4-203ENST00000519583 U3KPZ7 1027 aaPredicted RBP9.47□□□□□ -0.89
CLK4-203ENST00000519583 PDS5AQ29RF7 1337 aaKnown RBP9.47□□□□□ -0.89
CLK4-203ENST00000519583 SALL1Q9NSC2 1324 aa9.47□□□□□ -0.89
CLK4-203ENST00000519583 ZBTB22O15209 634 aa9.46□□□□□ -0.89
CLK4-203ENST00000519583 ZNF512BQ96KM6 892 aaPredicted RBP9.46□□□□□ -0.89
CLK4-203ENST00000519583 GLIS2Q9BZE0 524 aaPredicted RBP9.46□□□□□ -0.89
CLK4-203ENST00000519583 SERPINA10Q9UK55 444 aa9.46□□□□□ -0.89
CLK4-203ENST00000519583 ADAMTSL1Q8N6G6 1762 aa9.46□□□□□ -0.89
CLK4-203ENST00000519583 M0R2C6 588 aa9.46□□□□□ -0.9
CLK4-203ENST00000519583 PSMA5P28066 241 aa9.46□□□□□ -0.9
CLK4-203ENST00000519583 GSE1Q14687 1217 aa9.46□□□□□ -0.9
CLK4-203ENST00000519583 TICAM2Q86XR7 235 aa9.46□□□□□ -0.9
CLK4-203ENST00000519583 DZIP1Q86YF9 867 aaKnown RBP9.46□□□□□ -0.9
CLK4-203ENST00000519583 TEKT1Q969V4 418 aa9.46□□□□□ -0.9
CLK4-203ENST00000519583 PRMT6Q96LA8 375 aaPredicted RBP9.46□□□□□ -0.9
CLK4-203ENST00000519583 PGAP2Q9UHJ9 254 aa9.46□□□□□ -0.9
CLK4-203ENST00000519583 SPDYE2BA6NHP3 402 aa9.46□□□□□ -0.9
CLK4-203ENST00000519583 LARGE1O95461 756 aa9.46□□□□□ -0.9
CLK4-203ENST00000519583 SPDYE6P0CI01 402 aa9.46□□□□□ -0.9
CLK4-203ENST00000519583 DIXDC1Q155Q3 683 aa9.46□□□□□ -0.9
CLK4-203ENST00000519583 SPTY2D1Q68D10 685 aaPredicted RBP9.46□□□□□ -0.9
CLK4-203ENST00000519583 BLOC1S2Q6QNY1 142 aa9.46□□□□□ -0.9
CLK4-203ENST00000519583 KRT26Q7Z3Y9 468 aa9.46□□□□□ -0.9
CLK4-203ENST00000519583 USP48Q86UV5 1035 aa9.46□□□□□ -0.9
CLK4-203ENST00000519583 OSBP2Q969R2 916 aa9.46□□□□□ -0.9
CLK4-203ENST00000519583 TCEANC2Q96MN5 208 aa9.46□□□□□ -0.9
CLK4-203ENST00000519583 RAI14Q9P0K7 980 aa9.46□□□□□ -0.9
CLK4-203ENST00000519583 SCAF8Q9UPN6 1271 aaKnown RBP9.46□□□□□ -0.9
CLK4-203ENST00000519583 ZDHHC9Q9Y397 364 aa9.46□□□□□ -0.9
CLK4-203ENST00000519583 CLRN2A0PK11 232 aa9.45□□□□□ -0.9
CLK4-203ENST00000519583 TRAF5O00463 557 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms